RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	FLO9	P39712	1322 aa		10.43	□□□□□ -0.74
CUE1	YMR264W	PPZ2	P33329	710 aa		10.43	□□□□□ -0.74
CUE1	YMR264W	AIM3	P38266	947 aa	Known RBP	10.43	□□□□□ -0.74
CUE1	YMR264W	SER3	P40054	469 aa		10.43	□□□□□ -0.74
CUE1	YMR264W	CTK2	P46962	323 aa		10.43	□□□□□ -0.74
CUE1	YMR264W	YJL016W	P47072	561 aa		10.43	□□□□□ -0.74
CUE1	YMR264W	RSM23	Q01163	450 aa		10.43	□□□□□ -0.74
CUE1	YMR264W	YDR209C	Q03480	137 aa		10.43	□□□□□ -0.74
CUE1	YMR264W	YML018C	Q03730	393 aa		10.43	□□□□□ -0.74
CUE1	YMR264W	TFB5	Q3E7C1	72 aa	Predicted RBP	10.43	□□□□□ -0.74
CUE1	YMR264W	AAC1	P04710	309 aa		10.42	□□□□□ -0.74
CUE1	YMR264W	DBP2	P24783	546 aa	Known RBP	10.42	□□□□□ -0.74
CUE1	YMR264W	CPR3	P25719	182 aa		10.42	□□□□□ -0.74
CUE1	YMR264W	SUA5	P32579	426 aa		10.42	□□□□□ -0.74
CUE1	YMR264W	YMR144W	P40214	342 aa	Known RBP	10.42	□□□□□ -0.74
CUE1	YMR264W	PRY1	P47032	299 aa		10.42	□□□□□ -0.74
CUE1	YMR264W	ADO1	P47143	340 aa	Known RBP	10.42	□□□□□ -0.74
CUE1	YMR264W	PHB2	P50085	310 aa		10.42	□□□□□ -0.74
CUE1	YMR264W	ACS2	P52910	683 aa	Known RBP	10.42	□□□□□ -0.74
CUE1	YMR264W	YGL159W	P53110	370 aa		10.42	□□□□□ -0.74
CUE1	YMR264W	PCP1	P53259	346 aa		10.42	□□□□□ -0.74
CUE1	YMR264W	SMX3	P54999	86 aa	Predicted RBP	10.42	□□□□□ -0.74
CUE1	YMR264W	COX5B	P00425	151 aa		10.41	□□□□□ -0.74
CUE1	YMR264W	SED4	P25365	1065 aa		10.41	□□□□□ -0.74
CUE1	YMR264W	CDC39	P25655	2108 aa	Known RBP	10.41	□□□□□ -0.74
CUE1	YMR264W	RFA3	P26755	122 aa	Known RBP	10.41	□□□□□ -0.74
CUE1	YMR264W	MRT4	P33201	236 aa	Known RBP	10.41	□□□□□ -0.74
CUE1	YMR264W	NAT2	P37293	288 aa		10.41	□□□□□ -0.74
CUE1	YMR264W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	10.41	□□□□□ -0.74	not detected
CUE1	YMR264W	PBP1	P53297	722 aa	Known RBP	10.41	□□□□□ -0.74
CUE1	YMR264W	YDR248C	Q03786	193 aa		10.41	□□□□□ -0.74
CUE1	YMR264W	SYM1	Q06563	197 aa		10.41	□□□□□ -0.74
CUE1	YMR264W	FEX2	Q08991	375 aa		10.41	□□□□□ -0.74
CUE1	YMR264W	YBR085C-A	O43137	85 aa		10.4	□□□□□ -0.74
CUE1	YMR264W	RPS16A	P0CX51	143 aa	Known RBP	10.4	□□□□□ -0.74
CUE1	YMR264W	RPS16B	P0CX52	143 aa	Known RBP	10.4	□□□□□ -0.74
CUE1	YMR264W	VAM7	P32912	316 aa		10.4	□□□□□ -0.74
CUE1	YMR264W	MRPL36	P36531	177 aa		10.4	□□□□□ -0.74
CUE1	YMR264W	ATF1	P40353	525 aa		10.4	□□□□□ -0.74
CUE1	YMR264W	RPS0B	P46654	252 aa	Known RBP	10.4	□□□□□ -0.74
CUE1	YMR264W	AVT4	P50944	713 aa		10.4	□□□□□ -0.74
CUE1	YMR264W	YNL165W	P53891	406 aa		10.4	□□□□□ -0.74
CUE1	YMR264W	MRP51	Q02950	344 aa		10.4	□□□□□ -0.74
CUE1	YMR264W	AEP3	Q12089	606 aa		10.4	□□□□□ -0.74
CUE1	YMR264W	RFA1	P22336	621 aa	Known RBP	10.39	□□□□□ -0.75
CUE1	YMR264W	ERG3	P32353	365 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	MRP20	P32387	263 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	POP8	P38208	133 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	YBR096W	P38256	230 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	BMT5	P40493	336 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	UBC12	P52491	188 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	NIF3	P53081	288 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	HOL1	P53389	586 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	YNR048W	P53740	393 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	ATG4	P53867	494 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	ISU1	Q03020	165 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	YDR387C	Q04162	555 aa		10.39	□□□□□ -0.75
CUE1	YMR264W	LDB16	P25587	256 aa		10.38	□□□□□ -0.75
CUE1	YMR264W	YIL169C	P40442	995 aa		10.38	□□□□□ -0.75
CUE1	YMR264W	IKS1	P47042	667 aa		10.38	□□□□□ -0.75
CUE1	YMR264W	UBP8	P50102	471 aa		10.38	□□□□□ -0.75
CUE1	YMR264W	SKP1	P52286	194 aa		10.38	□□□□□ -0.75
CUE1	YMR264W	TIM11	P81449	96 aa	Predicted RBP	10.38	□□□□□ -0.75
CUE1	YMR264W	MRX9	Q07349	420 aa	Known RBP	10.38	□□□□□ -0.75
CUE1	YMR264W	Q0144	Q9ZZW2	109 aa		10.38	□□□□□ -0.75
CUE1	YMR264W	CSF1	Q12150	2958 aa		10.38	□□□□□ -0.75
CUE1	YMR264W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	10.37	□□□□□ -0.75	not detected
CUE1	YMR264W	TRR1	P29509	319 aa	Known RBP	10.37	□□□□□ -0.75
CUE1	YMR264W	YPC1	P38298	316 aa		10.37	□□□□□ -0.75
CUE1	YMR264W	TAD2	P47058	250 aa		10.37	□□□□□ -0.75
CUE1	YMR264W	NSA1	P53136	463 aa	Predicted RBP	10.37	□□□□□ -0.75
CUE1	YMR264W	HHT1	P61830	136 aa		10.37	□□□□□ -0.75
CUE1	YMR264W	CAB5	Q03941	241 aa		10.37	□□□□□ -0.75
CUE1	YMR264W	ANT1	Q06497	328 aa		10.37	□□□□□ -0.75
CUE1	YMR264W	ATP14	Q12349	124 aa		10.37	□□□□□ -0.75
CUE1	YMR264W	TPI1	P00942	248 aa	Known RBP	10.36	□□□□□ -0.75
CUE1	YMR264W	CBP6	P07253	162 aa	Predicted RBP	10.36	□□□□□ -0.75
CUE1	YMR264W	RIP1	P08067	215 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	RPL30	P14120	105 aa	Known RBP	10.36	□□□□□ -0.75
CUE1	YMR264W	SEC22	P22214	214 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	IFM1	P25038	676 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	TIP1	P27654	210 aa	Predicted RBP	10.36	□□□□□ -0.75
CUE1	YMR264W	AGA2	P32781	87 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	COS8	P38723	381 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	YND1	P40009	630 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	MOB2	P43563	287 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	GNA1	P43577	159 aa	Predicted RBP	10.36	□□□□□ -0.75
CUE1	YMR264W	ALG9	P53868	555 aa	Known RBP	10.36	□□□□□ -0.75
CUE1	YMR264W	COQ11	Q05892	277 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	THI72	Q08579	599 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	SCP1	Q08873	200 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	TFC7	Q12415	435 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	YJR112W-A	Q3E743	109 aa		10.36	□□□□□ -0.75
CUE1	YMR264W	RPS31	P05759	152 aa	Known RBP	10.35	□□□□□ -0.75
CUE1	YMR264W	SRY1	P36007	326 aa		10.35	□□□□□ -0.75
CUE1	YMR264W	OSH7	P38755	437 aa		10.35	□□□□□ -0.75
CUE1	YMR264W	YJR111C	P47148	283 aa	Known RBP	10.35	□□□□□ -0.75
CUE1	YMR264W	TIM44	Q01852	431 aa		10.35	□□□□□ -0.75
CUE1	YMR264W	NOC4	Q06512	552 aa	Predicted RBP	10.35	□□□□□ -0.75
CUE1	YMR264W	YDL180W	Q12301	547 aa		10.35	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms