RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W TDH3P00359 332 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
SFP1YLR403W MF(ALPHA)2P32435 120 aa8.24□□□□□ -1.09
SFP1YLR403W GEX2P36173 615 aa8.24□□□□□ -1.09
SFP1YLR403W POP8P38208 133 aa8.24□□□□□ -1.09
SFP1YLR403W MTC4P38335 694 aaKnown RBP8.24□□□□□ -1.09
SFP1YLR403W CUE1P38428 203 aa8.24□□□□□ -1.09
SFP1YLR403W TAH11P47112 604 aa8.24□□□□□ -1.09
SFP1YLR403W BUL1P48524 976 aa8.24□□□□□ -1.09
SFP1YLR403W PNC1P53184 216 aaKnown RBP8.24□□□□□ -1.09
SFP1YLR403W THG1P53215 237 aaKnown RBP8.24□□□□□ -1.09
SFP1YLR403W UBX3Q12229 455 aa8.24□□□□□ -1.09
SFP1YLR403W DET1Q99288 334 aaKnown RBP8.24□□□□□ -1.09
SFP1YLR403W BI3Q9ZZW7 517 aa8.24□□□□□ -1.09
SFP1YLR403W COX3P00420 269 aa8.23□□□□□ -1.09
SFP1YLR403W PRE8P23639 250 aa8.23□□□□□ -1.09
SFP1YLR403W SLM5P25345 492 aaKnown RBP8.23□□□□□ -1.09
SFP1YLR403W PUP3P25451 205 aaKnown RBP8.23□□□□□ -1.09
SFP1YLR403W ADK2P26364 225 aa8.23□□□□□ -1.09
SFP1YLR403W TMT1P32643 299 aa8.23□□□□□ -1.09
SFP1YLR403W RIB1P38066 345 aa8.23□□□□□ -1.09
SFP1YLR403W YHR210CP38893 341 aa8.23□□□□□ -1.09
SFP1YLR403W GTS1P40956 396 aa8.23□□□□□ -1.09
SFP1YLR403W CDC40P40968 455 aaPredicted RBP8.23□□□□□ -1.09
SFP1YLR403W ERG25P53045 309 aa8.23□□□□□ -1.09
SFP1YLR403W LST7P53237 242 aa8.23□□□□□ -1.09
SFP1YLR403W YKR011CQ02209 353 aa8.23□□□□□ -1.09
SFP1YLR403W SCW10Q04951 389 aa8.23□□□□□ -1.09
SFP1YLR403W DIC1Q06143 298 aa8.23□□□□□ -1.09
SFP1YLR403W POS5Q06892 414 aa8.23□□□□□ -1.09
SFP1YLR403W GEP5Q12393 293 aa8.23□□□□□ -1.09
SFP1YLR403W ARP2P32381 391 aaKnown RBP8.23□□□□□ -1.09
SFP1YLR403W UTR5P32630 166 aa8.23□□□□□ -1.09
SFP1YLR403W SCD5P34758 872 aa8.23□□□□□ -1.09
SFP1YLR403W MRPL24P36525 258 aaPredicted RBP8.23□□□□□ -1.09
SFP1YLR403W MRPL16P38064 232 aa8.23□□□□□ -1.09
SFP1YLR403W TOS1P38288 455 aa8.23□□□□□ -1.09
SFP1YLR403W SPL2P38839 148 aa8.23□□□□□ -1.09
SFP1YLR403W SOL3P38858 249 aa8.23□□□□□ -1.09
SFP1YLR403W HIT1P46973 164 aa8.23□□□□□ -1.09
SFP1YLR403W CDC55Q00362 526 aa8.23□□□□□ -1.09
SFP1YLR403W YCT1Q12235 531 aa8.23□□□□□ -1.09
SFP1YLR403W GCS1P35197 352 aa8.22□□□□□ -1.09
SFP1YLR403W PMU1P36069 295 aa8.22□□□□□ -1.09
SFP1YLR403W TRS20P38334 175 aa8.22□□□□□ -1.09
SFP1YLR403W YHR130CP38834 111 aa8.22□□□□□ -1.09
SFP1YLR403W YHR177WP38867 453 aa8.22□□□□□ -1.09
SFP1YLR403W PAU15P40585 124 aa8.22□□□□□ -1.09
SFP1YLR403W POP1P41812 875 aa8.22□□□□□ -1.09
SFP1YLR403W ERJ5P43613 295 aaPredicted RBP8.22□□□□□ -1.09
SFP1YLR403W SYF2P53277 215 aaPredicted RBP8.22□□□□□ -1.09
SFP1YLR403W CRZ1P53968 678 aa8.22□□□□□ -1.09
SFP1YLR403W YLR460CP54007 376 aa8.22□□□□□ -1.09
SFP1YLR403W RSM23Q01163 450 aa8.22□□□□□ -1.09
SFP1YLR403W HPT1Q04178 221 aaKnown RBP8.22□□□□□ -1.09
SFP1YLR403W SWC7Q06707 132 aa8.22□□□□□ -1.09
SFP1YLR403W WTM1Q12363 437 aaKnown RBP8.22□□□□□ -1.09
SFP1YLR403W ROT2P38138 954 aa8.22□□□□□ -1.09
SFP1YLR403W SSN3P39073 555 aa8.22□□□□□ -1.09
SFP1YLR403W YHC3P47040 408 aa8.22□□□□□ -1.09
SFP1YLR403W RRT6P53117 311 aaPredicted RBP8.22□□□□□ -1.09
SFP1YLR403W RCE1Q03530 315 aa8.22□□□□□ -1.09
SFP1YLR403W PRM6Q04705 352 aa8.22□□□□□ -1.09
SFP1YLR403W PAI3P01094 68 aa8.21□□□□□ -1.1
SFP1YLR403W SAM2P19358 384 aaKnown RBP8.21□□□□□ -1.1
SFP1YLR403W GRX1P25373 110 aaKnown RBP8.21□□□□□ -1.1
SFP1YLR403W IDH2P28241 369 aaKnown RBP8.21□□□□□ -1.1
SFP1YLR403W MOH1P38191 138 aa8.21□□□□□ -1.1
SFP1YLR403W YBL029WP38201 376 aa8.21□□□□□ -1.1
SFP1YLR403W PRE6P40303 254 aaKnown RBP8.21□□□□□ -1.1
SFP1YLR403W ERP1Q05359 219 aaKnown RBP8.21□□□□□ -1.1
SFP1YLR403W MRX8Q05473 314 aa8.21□□□□□ -1.1
SFP1YLR403W PAU23Q07987 124 aa8.21□□□□□ -1.1
SFP1YLR403W GPB1Q08886 897 aa8.21□□□□□ -1.1
SFP1YLR403W WTM2Q12206 467 aa8.21□□□□□ -1.1
SFP1YLR403W PAU17Q12370 124 aa8.21□□□□□ -1.1
SFP1YLR403W TY1A-NL1Q12391 440 aaKnown RBP8.21□□□□□ -1.1
SFP1YLR403W LAS17Q12446 633 aa8.21□□□□□ -1.1
SFP1YLR403W YOS1Q3E834 85 aa8.21□□□□□ -1.1
SFP1YLR403W ISD11Q6Q560 94 aa8.21□□□□□ -1.1
SFP1YLR403W RPS28BP0C0X0 67 aaKnown RBP8.2□□□□□ -1.1
SFP1YLR403W YBR121C-AP0C5L4 52 aa8.2□□□□□ -1.1
SFP1YLR403W HSP26P15992 214 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
SFP1YLR403W MCK1P21965 375 aaKnown RBP8.2□□□□□ -1.1
SFP1YLR403W HOM6P31116 359 aaKnown RBP8.2□□□□□ -1.1
SFP1YLR403W YJR015WP47090 510 aa8.2□□□□□ -1.1
SFP1YLR403W MGA1P53050 456 aa8.2□□□□□ -1.1
SFP1YLR403W APS2Q00381 147 aa8.2□□□□□ -1.1
SFP1YLR403W UBP16Q02863 499 aa8.2□□□□□ -1.1
SFP1YLR403W RSM10Q03201 203 aa8.2□□□□□ -1.1
SFP1YLR403W AVO2Q04749 426 aa8.2□□□□□ -1.1
SFP1YLR403W ATG33Q06485 197 aa8.2□□□□□ -1.1
SFP1YLR403W THP1Q08231 455 aa8.2□□□□□ -1.1
SFP1YLR403W DCI1Q08558 271 aa8.2□□□□□ -1.1
SFP1YLR403W HUT1Q12520 339 aa8.2□□□□□ -1.1
SFP1YLR403W RPS28AQ3E7X9 67 aaPredicted RBP8.2□□□□□ -1.1
SFP1YLR403W RAS2P01120 322 aaKnown RBP8.2□□□□□ -1.1
SFP1YLR403W YER190C-BP0CX94 160 aa8.2□□□□□ -1.1
SFP1YLR403W YEL077W-AP0CX95 160 aa8.2□□□□□ -1.1
SFP1YLR403W YGR296C-BP0CX96 160 aa8.2□□□□□ -1.1
SFP1YLR403W YPL283W-BP0CX97 160 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms