RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C YFL067WP43537 175 aa2.94□□□□□ -1.94
VPS33YLR396C YGL159WP53110 370 aa2.94□□□□□ -1.94
VPS33YLR396C RRN5Q02983 363 aa2.94□□□□□ -1.94
VPS33YLR396C SNO1Q03144 224 aa2.94□□□□□ -1.94
VPS33YLR396C SEN15Q04675 128 aa2.94□□□□□ -1.94
VPS33YLR396C GAS2Q06135 555 aa2.94□□□□□ -1.94
VPS33YLR396C SFM1Q12314 213 aa2.94□□□□□ -1.94
VPS33YLR396C YPR145C-AQ2V2P0 78 aa2.94□□□□□ -1.94
VPS33YLR396C NHP6BP11633 99 aaKnown RBP2.93□□□□□ -1.94
VPS33YLR396C MRPL44P19956 98 aa2.93□□□□□ -1.94
VPS33YLR396C IDH1P28834 360 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
VPS33YLR396C COX13P32799 129 aa2.93□□□□□ -1.94
VPS33YLR396C SUI1P32911 108 aaKnown RBP2.93□□□□□ -1.94
VPS33YLR396C SFC1P33303 322 aa2.93□□□□□ -1.94
VPS33YLR396C SOL2P37262 315 aa2.93□□□□□ -1.94
VPS33YLR396C LRP1P38801 184 aaKnown RBP2.93□□□□□ -1.94
VPS33YLR396C PAN6P40459 309 aa2.93□□□□□ -1.94
VPS33YLR396C YGR201CP42936 225 aa2.93□□□□□ -1.94
VPS33YLR396C SWC4P53201 476 aa2.93□□□□□ -1.94
VPS33YLR396C MRPL35Q06678 367 aa2.93□□□□□ -1.94
VPS33YLR396C PLB3Q08108 686 aa2.93□□□□□ -1.94
VPS33YLR396C SPC3Q12133 184 aa2.93□□□□□ -1.94
VPS33YLR396C ERV2Q12284 196 aa2.93□□□□□ -1.94
VPS33YLR396C GSC2P40989 1895 aa2.93□□□□□ -1.94
VPS33YLR396C CAR2P07991 424 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C SSA3P09435 649 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C MRP1P10662 321 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C SNF6P18888 332 aa2.92□□□□□ -1.94
VPS33YLR396C CPR4P25334 318 aa2.92□□□□□ -1.94
VPS33YLR396C DCC1P25559 380 aa2.92□□□□□ -1.94
VPS33YLR396C FAA1P30624 700 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C COT1P32798 439 aa2.92□□□□□ -1.94
VPS33YLR396C TMA19P35691 167 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C YPT52P36018 234 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C CHK1P38147 527 aa2.92□□□□□ -1.94
VPS33YLR396C ATG8P38182 117 aaRIP-Chip data2.92□□□□□ -1.94not detected
VPS33YLR396C YBR013CP38215 129 aa2.92□□□□□ -1.94
VPS33YLR396C ZTA1P38230 334 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C YMR262WP38430 313 aa2.92□□□□□ -1.94
VPS33YLR396C RFC4P40339 323 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C ATM1P40416 690 aa2.92□□□□□ -1.94
VPS33YLR396C COX16P47081 118 aa2.92□□□□□ -1.94
VPS33YLR396C RTT102P53330 157 aa2.92□□□□□ -1.94
VPS33YLR396C HCH1P53834 153 aa2.92□□□□□ -1.94
VPS33YLR396C BET5Q03630 159 aa2.92□□□□□ -1.94
VPS33YLR396C RUB1Q03919 77 aa2.92□□□□□ -1.94
VPS33YLR396C YDR124WQ04608 324 aa2.92□□□□□ -1.94
VPS33YLR396C SMA2Q04658 369 aa2.92□□□□□ -1.94
VPS33YLR396C SCW10Q04951 389 aa2.92□□□□□ -1.94
VPS33YLR396C SNT309Q06091 175 aaPredicted RBP2.92□□□□□ -1.94
VPS33YLR396C MFG1Q07684 458 aa2.92□□□□□ -1.94
VPS33YLR396C PML1Q07930 204 aaPredicted RBP2.92□□□□□ -1.94
VPS33YLR396C AKR2Q12013 749 aa2.92□□□□□ -1.94
VPS33YLR396C SNF8Q12483 233 aa2.92□□□□□ -1.94
VPS33YLR396C NAM2P11325 894 aa2.92□□□□□ -1.94
VPS33YLR396C RPB3P16370 318 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C KRR1P25586 316 aaPredicted RBP2.92□□□□□ -1.94
VPS33YLR396C CDC50P25656 391 aa2.92□□□□□ -1.94
VPS33YLR396C ADE1P27616 306 aa2.92□□□□□ -1.94
VPS33YLR396C KKQ8P36004 724 aa2.92□□□□□ -1.94
VPS33YLR396C POP7P38291 140 aa2.92□□□□□ -1.94
VPS33YLR396C PEX32P38292 413 aa2.92□□□□□ -1.94
VPS33YLR396C YPS6P40583 537 aa2.92□□□□□ -1.94
VPS33YLR396C PRM10P42946 383 aa2.92□□□□□ -1.94
VPS33YLR396C YPI1P43587 155 aa2.92□□□□□ -1.94
VPS33YLR396C PHB2P50085 310 aa2.92□□□□□ -1.94
VPS33YLR396C VBA1Q04301 562 aa2.92□□□□□ -1.94
VPS33YLR396C ANT1Q06497 328 aa2.92□□□□□ -1.94
VPS33YLR396C IES4Q08561 116 aa2.92□□□□□ -1.94
VPS33YLR396C RAD28Q12021 506 aa2.92□□□□□ -1.94
VPS33YLR396C YPL245WQ12179 454 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C YOR114WQ12219 294 aa2.92□□□□□ -1.94
VPS33YLR396C RPN5Q12250 445 aaKnown RBP2.92□□□□□ -1.94
VPS33YLR396C YLR046CQ12253 270 aa2.92□□□□□ -1.94
VPS33YLR396C AGC1Q12482 902 aa2.92□□□□□ -1.94
VPS33YLR396C PSF1Q12488 208 aa2.92□□□□□ -1.94
VPS33YLR396C RAS2P01120 322 aaKnown RBP2.91□□□□□ -1.94
VPS33YLR396C SIR2P06700 562 aa2.91□□□□□ -1.94
VPS33YLR396C DST1P07273 309 aa2.91□□□□□ -1.94
VPS33YLR396C SPT15P13393 240 aaKnown RBP2.91□□□□□ -1.94
VPS33YLR396C ERD1P16151 362 aa2.91□□□□□ -1.94
VPS33YLR396C ERD2P18414 219 aa2.91□□□□□ -1.94
VPS33YLR396C YPK2P18961 677 aa2.91□□□□□ -1.94
VPS33YLR396C AAT2P23542 418 aaKnown RBP2.91□□□□□ -1.94
VPS33YLR396C SUA5P32579 426 aa2.91□□□□□ -1.94
VPS33YLR396C SKT5P34226 696 aa2.91□□□□□ -1.94
VPS33YLR396C MAL32P38158 584 aa2.91□□□□□ -1.94
VPS33YLR396C YBL028CP38202 106 aa2.91□□□□□ -1.94
VPS33YLR396C HTD2P38790 280 aaKnown RBP2.91□□□□□ -1.94
VPS33YLR396C YHR122WP38829 231 aa2.91□□□□□ -1.94
VPS33YLR396C ALP1P38971 573 aa2.91□□□□□ -1.94
VPS33YLR396C SWM2P40342 146 aa2.91□□□□□ -1.94
VPS33YLR396C AYR1P40471 297 aa2.91□□□□□ -1.94
VPS33YLR396C GAB1P41733 394 aa2.91□□□□□ -1.94
VPS33YLR396C SPG5P42933 373 aa2.91□□□□□ -1.94
VPS33YLR396C PMT4P46971 762 aa2.91□□□□□ -1.94
VPS33YLR396C SDT1P53078 280 aa2.91□□□□□ -1.94
VPS33YLR396C MAL12P53341 584 aa2.91□□□□□ -1.94
VPS33YLR396C OAZ1Q02803 292 aa2.91□□□□□ -1.94
VPS33YLR396C MRPS17Q03246 237 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms