RNA–Protein interactions for RNA: YLL029W

FRA1, Transcript of Protein involved in negative regulation of iron regulon transcription, yeast

Gene FRA1, Length 2,250 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRA1	YLL029W	RHO4	Q00246	291 aa		7.35	□□□□□ -1.23
FRA1	YLL029W	IRC15	Q02733	499 aa		7.35	□□□□□ -1.23
FRA1	YLL029W	SEN15	Q04675	128 aa		7.35	□□□□□ -1.23
FRA1	YLL029W	NUS1	Q12063	375 aa		7.35	□□□□□ -1.23
FRA1	YLL029W	TFC7	Q12415	435 aa		7.35	□□□□□ -1.23
FRA1	YLL029W	CHO1	P08456	276 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	SFK1	P35735	353 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	AYR1	P40471	297 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	YFL064C	P43540	174 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	HXT16	P47185	567 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	YPL067C	Q02754	198 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	NRG1	Q03125	231 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	WTM2	Q12206	467 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	POM34	Q12445	299 aa		7.34	□□□□□ -1.23
FRA1	YLL029W	STE7	P06784	515 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	VMA3	P25515	160 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	IRS4	P36115	615 aa	Known RBP	7.34	□□□□□ -1.24
FRA1	YLL029W	GMH1	P36125	273 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	KTR3	P38130	404 aa	Predicted RBP	7.34	□□□□□ -1.24
FRA1	YLL029W	RTC2	P38279	296 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	YHR035W	P38769	630 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	SLM2	P53955	656 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	YET2	Q04210	160 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	GAL83	Q04739	417 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	TRI1	Q05024	226 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	TDA6	Q06466	467 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	YCT1	Q12235	531 aa		7.34	□□□□□ -1.24
FRA1	YLL029W	AHA1	Q12449	350 aa	Known RBP	7.34	□□□□□ -1.24
FRA1	YLL029W	COX5B	P00425	151 aa		7.33	□□□□□ -1.24
FRA1	YLL029W	SPT15	P13393	240 aa	Known RBP	7.33	□□□□□ -1.24
FRA1	YLL029W	ERD1	P16151	362 aa		7.33	□□□□□ -1.24
FRA1	YLL029W	KRE29	P40026	464 aa		7.33	□□□□□ -1.24
FRA1	YLL029W	YER189W	P40104	122 aa		7.33	□□□□□ -1.24
FRA1	YLL029W	LYS12	P40495	371 aa	Known RBP	7.33	□□□□□ -1.24
FRA1	YLL029W	GWT1	P47026	490 aa		7.33	□□□□□ -1.24
FRA1	YLL029W	UBC12	P52491	188 aa		7.33	□□□□□ -1.24
FRA1	YLL029W	YNL010W	P53981	241 aa	Known RBP	7.33	□□□□□ -1.24
FRA1	YLL029W	ASI3	P53983	676 aa		7.33	□□□□□ -1.24
FRA1	YLL029W	SUR7	P54003	302 aa		7.33	□□□□□ -1.24
FRA1	YLL029W	TY1A-DR2	Q03964	440 aa	Known RBP	7.33	□□□□□ -1.24
FRA1	YLL029W	LRS4	Q04087	347 aa	Known RBP	7.33	□□□□□ -1.24
FRA1	YLL029W	YKR104W	P0CE69	306 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	RPP1B	P10622	106 aa	Known RBP	7.32	□□□□□ -1.24
FRA1	YLL029W	ASC1	P38011	319 aa	Known RBP	7.32	□□□□□ -1.24
FRA1	YLL029W	YJL193W	P39542	402 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	YJR012C	P47087	207 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	YMR310C	Q04867	317 aa	Predicted RBP	7.32	□□□□□ -1.24
FRA1	YLL029W	MRX8	Q05473	314 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	YLL058W	Q12198	575 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	AI5_ALPHA	Q9ZZX1	630 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	YFL068W	P0CX99	160 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	YLL066W-A	P0CY00	160 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	YLL067W-A	P0CY01	160 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	MGT1	P26188	188 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	HOM6	P31116	359 aa	Known RBP	7.32	□□□□□ -1.24
FRA1	YLL029W	YGP1	P38616	354 aa	Known RBP	7.32	□□□□□ -1.24
FRA1	YLL029W	RPS20	P38701	121 aa	Known RBP	7.32	□□□□□ -1.24
FRA1	YLL029W	HNT1	Q04344	158 aa	Known RBP	7.32	□□□□□ -1.24
FRA1	YLL029W	RAD28	Q12021	506 aa		7.32	□□□□□ -1.24
FRA1	YLL029W	ATR1	P13090	542 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	EXO70	P19658	623 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	TSL1	P38427	1098 aa	Known RBP	7.31	□□□□□ -1.24
FRA1	YLL029W	CTR1	P49573	406 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	YNL092W	P53934	400 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	VPS28	Q02767	242 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	ENV7	Q12003	364 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	DET1	Q99288	334 aa	Known RBP	7.31	□□□□□ -1.24
FRA1	YLL029W	CDC6	P09119	513 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	LSB5	P25369	354 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	SPS18	P32572	300 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	SNC2	P33328	115 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	YFR020W	P43600	232 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	DAN1	P47178	298 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	SCS3	P53012	380 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	MRH4	P53166	561 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	SEC13	Q04491	297 aa	Known RBP	7.31	□□□□□ -1.24
FRA1	YLL029W	TY1A-NL1	Q12391	440 aa	Known RBP	7.31	□□□□□ -1.24
FRA1	YLL029W	TY1A-DR3	Q12441	440 aa		7.31	□□□□□ -1.24
FRA1	YLL029W	YML003W	P0CF16	290 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	PMI40	P29952	429 aa	Known RBP	7.3	□□□□□ -1.24
FRA1	YLL029W	HIS7	P33734	552 aa	Known RBP	7.3	□□□□□ -1.24
FRA1	YLL029W	YHR130C	P38834	111 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	CEM1	P39525	442 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	GAT2	P40209	560 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	CTK2	P46962	323 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	NUP57	P48837	541 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	UBC11	P52492	156 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	YIP4	P53093	235 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	YGR151C	P53287	111 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	YPR202W	Q08993	238 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	SNF5	P18480	905 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	ASH1	P34233	588 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	YKL151C	P36059	337 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	YBR053C	P38235	358 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	EHT1	P38295	451 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	MBA1	P38300	278 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	YHR078W	P38799	552 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	SMX2	P40204	77 aa	Known RBP	7.3	□□□□□ -1.24
FRA1	YLL029W	YJR015W	P47090	510 aa		7.3	□□□□□ -1.24
FRA1	YLL029W	MIC26	P50087	233 aa		7.3	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms