RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	HOM6	P31116	359 aa	Known RBP	2.64	□□□□□ -1.99
EBP2	YKL172W	YGP1	P38616	354 aa	Known RBP	2.64	□□□□□ -1.99
EBP2	YKL172W	SMB1	P40018	196 aa	Known RBP	2.64	□□□□□ -1.99
EBP2	YKL172W	MRH4	P53166	561 aa		2.64	□□□□□ -1.99
EBP2	YKL172W	GOT1	Q03554	138 aa		2.64	□□□□□ -1.99
EBP2	YKL172W	YPR098C	Q06089	161 aa		2.64	□□□□□ -1.99
EBP2	YKL172W	SDO1	Q07953	250 aa	Known RBP	2.64	□□□□□ -1.99
EBP2	YKL172W	SYC1	Q08553	188 aa	Predicted RBP	2.64	□□□□□ -1.99
EBP2	YKL172W	CSM4	Q08955	156 aa		2.64	□□□□□ -1.99
EBP2	YKL172W	YKR104W	P0CE69	306 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	SCO1	P23833	295 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	JEN1	P36035	616 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
EBP2	YKL172W	YHB1	P39676	399 aa	Known RBP	2.63	□□□□□ -1.99
EBP2	YKL172W	YJR146W	P47174	117 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	USE1	P53146	245 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	TIM11	P81449	96 aa	Predicted RBP	2.63	□□□□□ -1.99
EBP2	YKL172W	RRP40	Q08285	240 aa	Known RBP	2.63	□□□□□ -1.99
EBP2	YKL172W	YOL107W	Q12239	342 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	YPR011C	Q12251	326 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	EMP46	Q12396	444 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	SAS5	Q99314	248 aa		2.63	□□□□□ -1.99
EBP2	YKL172W	SGA1	P08019	549 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	SEC22	P22214	214 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	BIG1	P38813	335 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	THO1	P40040	218 aa	Known RBP	2.62	□□□□□ -1.99
EBP2	YKL172W	OST2	P46964	130 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	CAB4	P53332	305 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	COS6	P53344	381 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	SLM2	P53955	656 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	CGI121	Q03705	181 aa	Known RBP	2.62	□□□□□ -1.99
EBP2	YKL172W	RNH1	Q04740	348 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	RRT8	Q08219	342 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	EMC6	Q12431	108 aa		2.62	□□□□□ -1.99
EBP2	YKL172W	CCA1	P21269	546 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
EBP2	YKL172W	MRPL39	P36533	70 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	COS8	P38723	381 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	YER189W	P40104	122 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	RRN5	Q02983	363 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	SPG4	Q04438	115 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	YLR173W	Q06247	608 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	COQ10	Q08058	207 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	RUD3	Q12234	484 aa	Known RBP	2.61	□□□□□ -1.99
EBP2	YKL172W	MED4	Q12343	284 aa		2.61	□□□□□ -1.99
EBP2	YKL172W	SNU23	Q12368	194 aa	Predicted RBP	2.61	□□□□□ -1.99
EBP2	YKL172W	QCR6	P00127	147 aa		2.6	□□□□□ -1.99
EBP2	YKL172W	SCM4	P32564	187 aa		2.6	□□□□□ -1.99
EBP2	YKL172W	SGE1	P33335	543 aa		2.6	□□□□□ -1.99
EBP2	YKL172W	RCN1	P36054	211 aa		2.6	□□□□□ -1.99
EBP2	YKL172W	GLG2	P47011	380 aa		2.6	□□□□□ -1.99
EBP2	YKL172W	NUP84	P52891	726 aa		2.6	□□□□□ -1.99
EBP2	YKL172W	MRPL50	P53724	139 aa		2.6	□□□□□ -1.99
EBP2	YKL172W	RRS1	Q08746	203 aa	Known RBP	2.6	□□□□□ -1.99
EBP2	YKL172W	SNZ3	P43545	298 aa		2.59	□□□□□ -1.99
EBP2	YKL172W	YCT1	Q12235	531 aa		2.59	□□□□□ -1.99
EBP2	YKL172W	SAC3	P46674	1301 aa		2.59	□□□□□ -2
EBP2	YKL172W	YLR462W	O13556	202 aa		2.58	□□□□□ -2
EBP2	YKL172W	NTG1	P31378	399 aa		2.58	□□□□□ -2
EBP2	YKL172W	GOS1	P38736	223 aa		2.58	□□□□□ -2
EBP2	YKL172W	YEL075C	P39972	122 aa		2.58	□□□□□ -2
EBP2	YKL172W	BNA6	P43619	295 aa		2.58	□□□□□ -2
EBP2	YKL172W	CTF19	Q02732	369 aa		2.58	□□□□□ -2
EBP2	YKL172W	RSM10	Q03201	203 aa		2.58	□□□□□ -2
EBP2	YKL172W	KRE28	Q04431	385 aa		2.58	□□□□□ -2
EBP2	YKL172W	FAR8	Q05040	523 aa		2.58	□□□□□ -2
EBP2	YKL172W	MSH5	Q12175	901 aa		2.58	□□□□□ -2
EBP2	YKL172W	RPT5	P33297	434 aa	Known RBP	2.57	□□□□□ -2
EBP2	YKL172W	ARC15	P40518	154 aa	RIP-Chip data	2.57	□□□□□ -2	not detected
EBP2	YKL172W	YGL034C	P53186	121 aa		2.57	□□□□□ -2
EBP2	YKL172W	RHO3	Q00245	231 aa	Known RBP	2.57	□□□□□ -2
EBP2	YKL172W	BBP1	Q12365	385 aa		2.57	□□□□□ -2
EBP2	YKL172W	PUT1	P09368	476 aa		2.56	□□□□□ -2
EBP2	YKL172W	EHD3	P28817	500 aa		2.56	□□□□□ -2
EBP2	YKL172W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
EBP2	YKL172W	SNX4	P47057	423 aa		2.56	□□□□□ -2
EBP2	YKL172W	LIA1	P47120	325 aa	Known RBP	2.56	□□□□□ -2
EBP2	YKL172W	SNZ2	P53824	298 aa		2.56	□□□□□ -2
EBP2	YKL172W	YMR279C	Q03263	540 aa		2.56	□□□□□ -2
EBP2	YKL172W	PAM18	Q07914	168 aa		2.56	□□□□□ -2
EBP2	YKL172W	YOR029W	Q12243	111 aa		2.56	□□□□□ -2
EBP2	YKL172W	SWI1	P09547	1314 aa		2.55	□□□□□ -2
EBP2	YKL172W	YOR062C	P36025	268 aa		2.55	□□□□□ -2
EBP2	YKL172W	YBR096W	P38256	230 aa		2.55	□□□□□ -2
EBP2	YKL172W	RMR1	P53060	241 aa		2.55	□□□□□ -2
EBP2	YKL172W	YNL134C	P53912	376 aa	Known RBP	2.55	□□□□□ -2
EBP2	YKL172W	SRL4	Q03085	281 aa		2.55	□□□□□ -2
EBP2	YKL172W	YLR179C	Q06252	201 aa	Known RBP	2.55	□□□□□ -2
EBP2	YKL172W	YOR186W	Q08560	144 aa		2.55	□□□□□ -2
EBP2	YKL172W	GCN20	P43535	752 aa	Known RBP	2.54	□□□□□ -2
EBP2	YKL172W	YJR079W	P47126	109 aa		2.54	□□□□□ -2
EBP2	YKL172W	YGR026W	P53217	278 aa		2.54	□□□□□ -2
EBP2	YKL172W	ATG31	Q12421	196 aa		2.54	□□□□□ -2
EBP2	YKL172W	MHT1	Q12525	324 aa		2.54	□□□□□ -2
EBP2	YKL172W	Q0255	P03881	472 aa		2.53	□□□□□ -2
EBP2	YKL172W	ADH3	P07246	375 aa	Known RBP	2.53	□□□□□ -2
EBP2	YKL172W	NRG2	P38082	220 aa		2.53	□□□□□ -2
EBP2	YKL172W	YHR127W	P38833	243 aa	Known RBP	2.53	□□□□□ -2
EBP2	YKL172W	FMC1	P40491	155 aa		2.53	□□□□□ -2
EBP2	YKL172W	JHD2	P47156	728 aa	Predicted RBP	2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms