RNA–Protein interactions for RNA: YJR093C

FIP1, Transcript of Subunit of cleavage polyadenylation factor (CPF), yeastyeast

Gene FIP1, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FIP1YJR093C YBL008W-AQ3E821 79 aa2.58□□□□□ -2
FIP1YJR093C SWI1P09547 1314 aa2.58□□□□□ -2
FIP1YJR093C RPO26P20435 155 aa2.57□□□□□ -2
FIP1YJR093C SGE1P33335 543 aa2.57□□□□□ -2
FIP1YJR093C MAL32P38158 584 aa2.57□□□□□ -2
FIP1YJR093C YER188WP40103 239 aa2.57□□□□□ -2
FIP1YJR093C YJL144WP47009 104 aa2.57□□□□□ -2
FIP1YJR093C MRH4P53166 561 aa2.57□□□□□ -2
FIP1YJR093C MAL12P53341 584 aa2.57□□□□□ -2
FIP1YJR093C SPG4Q04438 115 aa2.57□□□□□ -2
FIP1YJR093C RRP40Q08285 240 aaKnown RBP2.57□□□□□ -2
FIP1YJR093C PPH21P23594 369 aa2.56□□□□□ -2
FIP1YJR093C YCR102CP25608 368 aa2.56□□□□□ -2
FIP1YJR093C SRB4P32569 687 aa2.56□□□□□ -2
FIP1YJR093C TEM1P38987 245 aa2.56□□□□□ -2
FIP1YJR093C YGL088WP53151 121 aa2.56□□□□□ -2
FIP1YJR093C NOP13P53883 403 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
FIP1YJR093C KRE28Q04431 385 aa2.56□□□□□ -2
FIP1YJR093C YLR283WQ05867 314 aa2.56□□□□□ -2
FIP1YJR093C YOR268CQ08734 132 aa2.56□□□□□ -2
FIP1YJR093C SMT3Q12306 101 aaKnown RBP2.56□□□□□ -2
FIP1YJR093C GEP5Q12393 293 aa2.56□□□□□ -2
FIP1YJR093C FZO1P38297 855 aa2.55□□□□□ -2
FIP1YJR093C THO1P40040 218 aaKnown RBP2.55□□□□□ -2
FIP1YJR093C RTR1P40084 226 aaPredicted RBP2.55□□□□□ -2
FIP1YJR093C SSU72P53538 206 aaPredicted RBP2.55□□□□□ -2
FIP1YJR093C HRT1Q08273 121 aa2.55□□□□□ -2
FIP1YJR093C SLD7Q08457 257 aa2.55□□□□□ -2
FIP1YJR093C YLR126CQ12288 251 aa2.55□□□□□ -2
FIP1YJR093C PST1Q12355 444 aa2.55□□□□□ -2
FIP1YJR093C SNU23Q12368 194 aaPredicted RBP2.55□□□□□ -2
FIP1YJR093C RHO1P06780 209 aaKnown RBP2.54□□□□□ -2
FIP1YJR093C SEC22P22214 214 aa2.54□□□□□ -2
FIP1YJR093C RNP1P32385 249 aa2.54□□□□□ -2
FIP1YJR093C YKL075CP36083 450 aa2.54□□□□□ -2
FIP1YJR093C YHR127WP38833 243 aaKnown RBP2.54□□□□□ -2
FIP1YJR093C GON7P46984 123 aa2.54□□□□□ -2
FIP1YJR093C GOT1Q03554 138 aa2.54□□□□□ -2
FIP1YJR093C YMR114CQ04471 368 aaKnown RBP2.54□□□□□ -2
FIP1YJR093C YDR124WQ04608 324 aa2.54□□□□□ -2
FIP1YJR093C SYC1Q08553 188 aaPredicted RBP2.54□□□□□ -2
FIP1YJR093C YOR186WQ08560 144 aa2.54□□□□□ -2
FIP1YJR093C CLP1Q08685 445 aaPredicted RBP2.54□□□□□ -2
FIP1YJR093C ARG80P07249 177 aa2.53□□□□□ -2
FIP1YJR093C MRPL25P23369 157 aa2.53□□□□□ -2
FIP1YJR093C BMH2P34730 273 aaKnown RBP2.53□□□□□ -2
FIP1YJR093C DRE2P36152 348 aa2.53□□□□□ -2
FIP1YJR093C MRPL39P36533 70 aa2.53□□□□□ -2
FIP1YJR093C SYF2P53277 215 aaPredicted RBP2.53□□□□□ -2
FIP1YJR093C YNL046WP53956 172 aa2.53□□□□□ -2
FIP1YJR093C SPO77Q06134 477 aa2.53□□□□□ -2
FIP1YJR093C YPL229WQ99395 206 aa2.53□□□□□ -2
FIP1YJR093C RSA4P25382 515 aaKnown RBP2.52□□□□□ -2.01
FIP1YJR093C YHB1P39676 399 aaKnown RBP2.52□□□□□ -2.01
FIP1YJR093C CAB4P53332 305 aa2.52□□□□□ -2.01
FIP1YJR093C RSM10Q03201 203 aa2.52□□□□□ -2.01
FIP1YJR093C SEI1Q06058 285 aa2.52□□□□□ -2.01
FIP1YJR093C EMP46Q12396 444 aa2.52□□□□□ -2.01
FIP1YJR093C YPR096CO13587 100 aa2.51□□□□□ -2.01
FIP1YJR093C SGA1P08019 549 aa2.51□□□□□ -2.01
FIP1YJR093C VPS21P36017 210 aaKnown RBP2.51□□□□□ -2.01
FIP1YJR093C MIC12P38341 106 aa2.51□□□□□ -2.01
FIP1YJR093C SSH1P38353 490 aaKnown RBP2.51□□□□□ -2.01
FIP1YJR093C OTU1P43558 301 aa2.51□□□□□ -2.01
FIP1YJR093C RPC17P47076 161 aa2.51□□□□□ -2.01
FIP1YJR093C MSA1Q08471 629 aa2.51□□□□□ -2.01
FIP1YJR093C YKR032WP36127 104 aa2.5□□□□□ -2.01
FIP1YJR093C MSA2P36157 363 aa2.5□□□□□ -2.01
FIP1YJR093C MIX17Q03667 156 aa2.5□□□□□ -2.01
FIP1YJR093C DCR2Q05924 578 aa2.5□□□□□ -2.01
FIP1YJR093C RUD3Q12234 484 aaKnown RBP2.5□□□□□ -2.01
FIP1YJR093C BBP1Q12365 385 aa2.5□□□□□ -2.01
FIP1YJR093C DPM1P14020 267 aaKnown RBP2.49□□□□□ -2.01
FIP1YJR093C NTF2P33331 125 aaKnown RBP2.49□□□□□ -2.01
FIP1YJR093C MED6P38782 295 aa2.49□□□□□ -2.01
FIP1YJR093C YER189WP40104 122 aa2.49□□□□□ -2.01
FIP1YJR093C MSS2P40990 351 aa2.49□□□□□ -2.01
FIP1YJR093C YJR141WP47172 347 aaPredicted RBP2.49□□□□□ -2.01
FIP1YJR093C YJR146WP47174 117 aa2.49□□□□□ -2.01
FIP1YJR093C TRM9P49957 279 aa2.49□□□□□ -2.01
FIP1YJR093C GRH1Q04410 372 aaKnown RBP2.49□□□□□ -2.01
FIP1YJR093C RDS3Q06835 107 aaPredicted RBP2.49□□□□□ -2.01
FIP1YJR093C GIS3Q12418 502 aa2.49□□□□□ -2.01
FIP1YJR093C THP2O13539 261 aaKnown RBP2.48□□□□□ -2.01
FIP1YJR093C ERD2P18414 219 aa2.48□□□□□ -2.01
FIP1YJR093C CDC10P25342 322 aaKnown RBP2.48□□□□□ -2.01
FIP1YJR093C VMA6P32366 345 aaKnown RBP2.48□□□□□ -2.01
FIP1YJR093C RCN1P36054 211 aa2.48□□□□□ -2.01
FIP1YJR093C CUE1P38428 203 aa2.48□□□□□ -2.01
FIP1YJR093C TCD1P38756 429 aa2.48□□□□□ -2.01
FIP1YJR093C RTC3P38804 111 aaPredicted RBP2.48□□□□□ -2.01
FIP1YJR093C YGL159WP53110 370 aa2.48□□□□□ -2.01
FIP1YJR093C YLR030WQ07967 263 aa2.48□□□□□ -2.01
FIP1YJR093C SIR4P11978 1358 aa2.48□□□□□ -2.01
FIP1YJR093C YHR139C-AO13536 103 aa2.47□□□□□ -2.01
FIP1YJR093C SNA3P14359 133 aa2.47□□□□□ -2.01
FIP1YJR093C PPA2P28239 310 aa2.47□□□□□ -2.01
FIP1YJR093C YGP1P38616 354 aaKnown RBP2.47□□□□□ -2.01
FIP1YJR093C URA8P38627 578 aaPredicted RBP2.47□□□□□ -2.01
FIP1YJR093C YMR144WP40214 342 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms