RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C YFR054CP43622 192 aa2.05□□□□□ -2.08
CUP1-2YHR055C RSM10Q03201 203 aa2.05□□□□□ -2.08
CUP1-2YHR055C PRM15Q03262 622 aa2.05□□□□□ -2.08
CUP1-2YHR055C ATG17Q06410 417 aa2.05□□□□□ -2.08
CUP1-2YHR055C YPR147CQ06522 304 aaKnown RBP2.05□□□□□ -2.08
CUP1-2YHR055C BBP1Q12365 385 aa2.05□□□□□ -2.08
CUP1-2YHR055C SNF8Q12483 233 aa2.05□□□□□ -2.08
CUP1-2YHR055C QRI5P32344 111 aa2.04□□□□□ -2.08
CUP1-2YHR055C PRS4P38063 326 aaPredicted RBP2.04□□□□□ -2.08
CUP1-2YHR055C COS8P38723 381 aa2.04□□□□□ -2.08
CUP1-2YHR055C ADH6Q04894 360 aaKnown RBP2.04□□□□□ -2.08
CUP1-2YHR055C EMP46Q12396 444 aa2.04□□□□□ -2.08
CUP1-2YHR055C PRS2P38620 318 aaKnown RBP2.03□□□□□ -2.08
CUP1-2YHR055C YHB1P39676 399 aaKnown RBP2.03□□□□□ -2.08
CUP1-2YHR055C ARC15P40518 154 aaRIP-Chip data2.03□□□□□ -2.08not detected
CUP1-2YHR055C GOT1Q03554 138 aa2.03□□□□□ -2.08
CUP1-2YHR055C YLR179CQ06252 201 aaKnown RBP2.03□□□□□ -2.08
CUP1-2YHR055C BOL1Q3E793 110 aa2.03□□□□□ -2.08
CUP1-2YHR055C COX2P00410 251 aa2.02□□□□□ -2.09
CUP1-2YHR055C DAL82P21705 255 aa2.02□□□□□ -2.09
CUP1-2YHR055C YER189WP40104 122 aa2.02□□□□□ -2.09
CUP1-2YHR055C DAD3P69850 94 aa2.02□□□□□ -2.09
CUP1-2YHR055C CTF19Q02732 369 aa2.02□□□□□ -2.09
CUP1-2YHR055C YDR209CQ03480 137 aa2.02□□□□□ -2.09
CUP1-2YHR055C COX20Q04935 205 aa2.02□□□□□ -2.09
CUP1-2YHR055C OM45P16547 393 aa2.01□□□□□ -2.09
CUP1-2YHR055C JEN1P36035 616 aa2□□□□□ -2.09
CUP1-2YHR055C MRPL39P36533 70 aa2□□□□□ -2.09
CUP1-2YHR055C MRH4P53166 561 aa2□□□□□ -2.09
CUP1-2YHR055C YGL034CP53186 121 aa2□□□□□ -2.09
CUP1-2YHR055C YGR026WP53217 278 aa2□□□□□ -2.09
CUP1-2YHR055C MPP6P53725 186 aaPredicted RBP2□□□□□ -2.09
CUP1-2YHR055C YMR279CQ03263 540 aa2□□□□□ -2.09
CUP1-2YHR055C SYC1Q08553 188 aaPredicted RBP2□□□□□ -2.09
CUP1-2YHR055C SWI1P09547 1314 aa1.99□□□□□ -2.09
CUP1-2YHR055C YLR462WO13556 202 aa1.99□□□□□ -2.09
CUP1-2YHR055C Q0255P03881 472 aa1.99□□□□□ -2.09
CUP1-2YHR055C YHR032W-AP0C5N6 59 aa1.99□□□□□ -2.09
CUP1-2YHR055C YKR104WP0CE69 306 aa1.99□□□□□ -2.09
CUP1-2YHR055C YEL075CP39972 122 aa1.99□□□□□ -2.09
CUP1-2YHR055C LSM4P40070 187 aaKnown RBP1.99□□□□□ -2.09
CUP1-2YHR055C SNZ3P43545 298 aa1.99□□□□□ -2.09
CUP1-2YHR055C YAR1P46683 200 aa1.99□□□□□ -2.09
CUP1-2YHR055C RRP40Q08285 240 aaKnown RBP1.99□□□□□ -2.09
CUP1-2YHR055C SGE1P33335 543 aa1.98□□□□□ -2.09
CUP1-2YHR055C FZO1P38297 855 aa1.98□□□□□ -2.09
CUP1-2YHR055C YHR125WP38831 101 aa1.98□□□□□ -2.09
CUP1-2YHR055C AYR1P40471 297 aa1.98□□□□□ -2.09
CUP1-2YHR055C YPR098CQ06089 161 aa1.98□□□□□ -2.09
CUP1-2YHR055C FBA1P14540 359 aaKnown RBP1.97□□□□□ -2.09
CUP1-2YHR055C POL30P15873 258 aaKnown RBP1.97□□□□□ -2.09
CUP1-2YHR055C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
CUP1-2YHR055C SMB1P40018 196 aaKnown RBP1.97□□□□□ -2.09
CUP1-2YHR055C RTT105P40063 208 aa1.97□□□□□ -2.09
CUP1-2YHR055C SPG4Q04438 115 aa1.97□□□□□ -2.09
CUP1-2YHR055C FAR8Q05040 523 aa1.97□□□□□ -2.09
CUP1-2YHR055C COQ10Q08058 207 aa1.97□□□□□ -2.09
CUP1-2YHR055C AKR2Q12013 749 aa1.97□□□□□ -2.09
CUP1-2YHR055C BTS1Q12051 335 aa1.97□□□□□ -2.09
CUP1-2YHR055C RNA15P25299 296 aaPredicted RBP1.96□□□□□ -2.1
CUP1-2YHR055C MEP1P40260 492 aa1.96□□□□□ -2.1
CUP1-2YHR055C USE1P53146 245 aa1.96□□□□□ -2.1
CUP1-2YHR055C ATO3Q12359 275 aa1.96□□□□□ -2.1
CUP1-2YHR055C PEX4P29340 183 aa1.95□□□□□ -2.1
CUP1-2YHR055C HOM6P31116 359 aaKnown RBP1.95□□□□□ -2.1
CUP1-2YHR055C ERG24P32462 438 aaKnown RBP1.95□□□□□ -2.1
CUP1-2YHR055C VMA11P32842 164 aa1.95□□□□□ -2.1
CUP1-2YHR055C MSA2P36157 363 aa1.95□□□□□ -2.1
CUP1-2YHR055C MRX3P38172 270 aa1.95□□□□□ -2.1
CUP1-2YHR055C THO1P40040 218 aaKnown RBP1.95□□□□□ -2.1
CUP1-2YHR055C RRS1Q08746 203 aaKnown RBP1.95□□□□□ -2.1
CUP1-2YHR055C PEP8P40335 379 aa1.94□□□□□ -2.1
CUP1-2YHR055C SMD3P43321 101 aaKnown RBP1.94□□□□□ -2.1
CUP1-2YHR055C RMR1P53060 241 aa1.94□□□□□ -2.1
CUP1-2YHR055C YGL159WP53110 370 aa1.94□□□□□ -2.1
CUP1-2YHR055C SNZ2P53824 298 aa1.94□□□□□ -2.1
CUP1-2YHR055C YLR030WQ07967 263 aa1.94□□□□□ -2.1
CUP1-2YHR055C SNU23Q12368 194 aaPredicted RBP1.94□□□□□ -2.1
CUP1-2YHR055C COX5AP00424 153 aa1.93□□□□□ -2.1
CUP1-2YHR055C GOS1P38736 223 aa1.93□□□□□ -2.1
CUP1-2YHR055C DOG1P38774 246 aa1.93□□□□□ -2.1
CUP1-2YHR055C FIS1P40515 155 aa1.93□□□□□ -2.1
CUP1-2YHR055C CIS3P47001 227 aa1.93□□□□□ -2.1
CUP1-2YHR055C GTR2P53290 341 aa1.93□□□□□ -2.1
CUP1-2YHR055C RHO3Q00245 231 aaKnown RBP1.93□□□□□ -2.1
CUP1-2YHR055C MRPS8Q03799 155 aa1.93□□□□□ -2.1
CUP1-2YHR055C YOR186WQ08560 144 aa1.93□□□□□ -2.1
CUP1-2YHR055C YPL257WQ08974 193 aa1.93□□□□□ -2.1
CUP1-2YHR055C SCL1P21243 252 aaKnown RBP1.92□□□□□ -2.1
CUP1-2YHR055C EHD3P28817 500 aa1.92□□□□□ -2.1
CUP1-2YHR055C MDH3P32419 343 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
CUP1-2YHR055C BIG1P38813 335 aa1.92□□□□□ -2.1
CUP1-2YHR055C ERG25P53045 309 aa1.92□□□□□ -2.1
CUP1-2YHR055C YGR219WP53307 113 aa1.92□□□□□ -2.1
CUP1-2YHR055C INM2Q05533 292 aa1.92□□□□□ -2.1
CUP1-2YHR055C SDO1Q07953 250 aaKnown RBP1.92□□□□□ -2.1
CUP1-2YHR055C IPP1P00817 287 aaKnown RBP1.91□□□□□ -2.1
CUP1-2YHR055C RPL9AP05738 191 aaKnown RBP1.91□□□□□ -2.1
CUP1-2YHR055C MSF1P08425 469 aa1.91□□□□□ -2.1
CUP1-2YHR055C DSF1P0CX08 502 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms