RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W SCP1Q08873 200 aa7.07□□□□□ -1.28
ABP1YCR088W RPS31P05759 152 aaKnown RBP7.06□□□□□ -1.28
ABP1YCR088W UBI4P0CG63 381 aaKnown RBP7.06□□□□□ -1.28
ABP1YCR088W RPL40AP0CH08 128 aaKnown RBP7.06□□□□□ -1.28
ABP1YCR088W RPL40BP0CH09 128 aaKnown RBP7.06□□□□□ -1.28
ABP1YCR088W PCL1P24867 279 aa7.06□□□□□ -1.28
ABP1YCR088W TRR1P29509 319 aaKnown RBP7.06□□□□□ -1.28
ABP1YCR088W VMA5P31412 392 aaKnown RBP7.06□□□□□ -1.28
ABP1YCR088W UMP1P38293 148 aa7.06□□□□□ -1.28
ABP1YCR088W DLS1P40366 167 aa7.06□□□□□ -1.28
ABP1YCR088W EMC5P40540 141 aa7.06□□□□□ -1.28
ABP1YCR088W OYE3P41816 400 aaPredicted RBP7.06□□□□□ -1.28
ABP1YCR088W MTM1P53320 366 aa7.06□□□□□ -1.28
ABP1YCR088W SMX3P54999 86 aaPredicted RBP7.06□□□□□ -1.28
ABP1YCR088W APM1Q00776 475 aaPredicted RBP7.06□□□□□ -1.28
ABP1YCR088W SKO1Q02100 647 aa7.06□□□□□ -1.28
ABP1YCR088W ERP4Q12450 207 aa7.06□□□□□ -1.28
ABP1YCR088W YPR145C-AQ2V2P0 78 aa7.06□□□□□ -1.28
ABP1YCR088W YSF3P0C074 85 aaPredicted RBP7.05□□□□□ -1.28
ABP1YCR088W MCM1P11746 286 aa7.05□□□□□ -1.28
ABP1YCR088W APA2P22108 325 aa7.05□□□□□ -1.28
ABP1YCR088W MRS4P23500 304 aa7.05□□□□□ -1.28
ABP1YCR088W HSP150P32478 413 aa7.05□□□□□ -1.28
ABP1YCR088W SRX1P36077 127 aa7.05□□□□□ -1.28
ABP1YCR088W YJR141WP47172 347 aaPredicted RBP7.05□□□□□ -1.28
ABP1YCR088W ACT1P60010 375 aaKnown RBP7.05□□□□□ -1.28
ABP1YCR088W YDR248CQ03786 193 aa7.05□□□□□ -1.28
ABP1YCR088W STP3Q05937 343 aa7.05□□□□□ -1.28
ABP1YCR088W MCT1Q12283 360 aa7.05□□□□□ -1.28
ABP1YCR088W YLR358CO13565 187 aa7.05□□□□□ -1.28
ABP1YCR088W NUD1P32336 851 aa7.05□□□□□ -1.28
ABP1YCR088W EMP70P32802 667 aa7.05□□□□□ -1.28
ABP1YCR088W ERJ5P43613 295 aaPredicted RBP7.05□□□□□ -1.28
ABP1YCR088W SSN8P47821 323 aa7.05□□□□□ -1.28
ABP1YCR088W SRB7P47822 140 aa7.05□□□□□ -1.28
ABP1YCR088W CWC24P53769 259 aa7.05□□□□□ -1.28
ABP1YCR088W ALG9P53868 555 aaKnown RBP7.05□□□□□ -1.28
ABP1YCR088W HNT1Q04344 158 aaKnown RBP7.05□□□□□ -1.28
ABP1YCR088W THI73Q07904 523 aa7.05□□□□□ -1.28
ABP1YCR088W PRS5Q12265 496 aaKnown RBP7.05□□□□□ -1.28
ABP1YCR088W YLR146W-AQ2V2P1 62 aa7.05□□□□□ -1.28
ABP1YCR088W NAM2P11325 894 aa7.04□□□□□ -1.28
ABP1YCR088W MSK1P32048 576 aa7.04□□□□□ -1.28
ABP1YCR088W LNP1P38878 278 aa7.04□□□□□ -1.28
ABP1YCR088W QRI1P43123 477 aaKnown RBP7.04□□□□□ -1.28
ABP1YCR088W SEI1Q06058 285 aa7.04□□□□□ -1.28
ABP1YCR088W SDO1Q07953 250 aaKnown RBP7.04□□□□□ -1.28
ABP1YCR088W DGK1Q12382 290 aa7.04□□□□□ -1.28
ABP1YCR088W HMS1Q12398 434 aa7.04□□□□□ -1.28
ABP1YCR088W BRR2P32639 2163 aaKnown RBP7.04□□□□□ -1.28
ABP1YCR088W ARF1P11076 181 aaKnown RBP7.03□□□□□ -1.28
ABP1YCR088W RFA1P22336 621 aaKnown RBP7.03□□□□□ -1.28
ABP1YCR088W KRR1P25586 316 aaPredicted RBP7.03□□□□□ -1.28
ABP1YCR088W MCM10P32354 571 aa7.03□□□□□ -1.28
ABP1YCR088W YBL010CP32788 280 aa7.03□□□□□ -1.28
ABP1YCR088W FRM2P37261 193 aa7.03□□□□□ -1.28
ABP1YCR088W GPI16P38875 610 aa7.03□□□□□ -1.28
ABP1YCR088W PGD1P40356 397 aa7.03□□□□□ -1.28
ABP1YCR088W SNO3P43544 222 aa7.03□□□□□ -1.28
ABP1YCR088W RTT103Q05543 409 aa7.03□□□□□ -1.28
ABP1YCR088W MIM1Q08176 113 aa7.03□□□□□ -1.28
ABP1YCR088W FCF2Q12035 217 aaPredicted RBP7.03□□□□□ -1.28
ABP1YCR088W YRA1Q12159 226 aaKnown RBP7.03□□□□□ -1.28
ABP1YCR088W ERG3P32353 365 aa7.03□□□□□ -1.28
ABP1YCR088W ATG8P38182 117 aaRIP-Chip data7.03□□□□□ -1.28not detected
ABP1YCR088W YJR115WP47152 169 aa7.03□□□□□ -1.28
ABP1YCR088W SOL1P50278 321 aa7.03□□□□□ -1.28
ABP1YCR088W SUN4P53616 420 aa7.03□□□□□ -1.28
ABP1YCR088W AAH1P53909 347 aa7.03□□□□□ -1.28
ABP1YCR088W RNH201P53942 307 aa7.03□□□□□ -1.28
ABP1YCR088W CAB5Q03941 241 aa7.03□□□□□ -1.28
ABP1YCR088W NNT1Q05874 261 aa7.03□□□□□ -1.28
ABP1YCR088W YDR034W-BQ6Q5X2 51 aa7.03□□□□□ -1.28
ABP1YCR088W YML003WP0CF16 290 aa7.02□□□□□ -1.29
ABP1YCR088W FIG1P38224 298 aa7.02□□□□□ -1.29
ABP1YCR088W RFC2P40348 353 aa7.02□□□□□ -1.29
ABP1YCR088W GTT1P40582 234 aa7.02□□□□□ -1.29
ABP1YCR088W SPG5P42933 373 aa7.02□□□□□ -1.29
ABP1YCR088W YJR056CP47115 236 aa7.02□□□□□ -1.29
ABP1YCR088W ADO1P47143 340 aaKnown RBP7.02□□□□□ -1.29
ABP1YCR088W ASK10P48361 1146 aa7.02□□□□□ -1.29
ABP1YCR088W RHO5P53879 331 aaKnown RBP7.02□□□□□ -1.29
ABP1YCR088W SAM50P53969 484 aa7.02□□□□□ -1.29
ABP1YCR088W YLR460CP54007 376 aa7.02□□□□□ -1.29
ABP1YCR088W PRP46Q12417 451 aaPredicted RBP7.02□□□□□ -1.29
ABP1YCR088W YFR010W-AP0C5N0 62 aa7.01□□□□□ -1.29
ABP1YCR088W APD1P38281 316 aa7.01□□□□□ -1.29
ABP1YCR088W ARC40P38328 384 aaKnown RBP7.01□□□□□ -1.29
ABP1YCR088W PRE3P38624 215 aa7.01□□□□□ -1.29
ABP1YCR088W YJL193WP39542 402 aa7.01□□□□□ -1.29
ABP1YCR088W POG1P40473 351 aa7.01□□□□□ -1.29
ABP1YCR088W AIR1P40507 360 aaKnown RBP7.01□□□□□ -1.29
ABP1YCR088W IDP2P41939 412 aa7.01□□□□□ -1.29
ABP1YCR088W MOG1P47123 218 aa7.01□□□□□ -1.29
ABP1YCR088W CUZ1P53899 274 aa7.01□□□□□ -1.29
ABP1YCR088W YCL001W-AP87012 153 aa7.01□□□□□ -1.29
ABP1YCR088W YMR279CQ03263 540 aa7.01□□□□□ -1.29
ABP1YCR088W LRS4Q04087 347 aaKnown RBP7.01□□□□□ -1.29
ABP1YCR088W YMR253CQ04835 414 aa7.01□□□□□ -1.29
ABP1YCR088W GAL1P04385 528 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms