RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W SMB1P40018 196 aaKnown RBP1.55□□□□□ -2.16
YCL020WYCL020W DSN1P40568 576 aa1.55□□□□□ -2.16
YCL020WYCL020W SNZ3P43545 298 aa1.55□□□□□ -2.16
YCL020WYCL020W OM45P16547 393 aa1.54□□□□□ -2.16
YCL020WYCL020W JEN1P36035 616 aa1.54□□□□□ -2.16
YCL020WYCL020W DRE2P36152 348 aa1.54□□□□□ -2.16
YCL020WYCL020W YFR054CP43622 192 aa1.54□□□□□ -2.16
YCL020WYCL020W OST2P46964 130 aa1.54□□□□□ -2.16
YCL020WYCL020W YPR147CQ06522 304 aaKnown RBP1.54□□□□□ -2.16
YCL020WYCL020W EMP46Q12396 444 aa1.54□□□□□ -2.16
YCL020WYCL020W RAD3P06839 778 aa1.53□□□□□ -2.16
YCL020WYCL020W PRS2P38620 318 aaKnown RBP1.53□□□□□ -2.16
YCL020WYCL020W MEP1P40260 492 aa1.53□□□□□ -2.16
YCL020WYCL020W RPL10P41805 221 aaKnown RBP1.53□□□□□ -2.16
YCL020WYCL020W ALG11P53954 548 aaKnown RBP1.53□□□□□ -2.16
YCL020WYCL020W SCM4P32564 187 aa1.52□□□□□ -2.17
YCL020WYCL020W RIB7P33312 244 aa1.52□□□□□ -2.17
YCL020WYCL020W CTR2P38865 189 aa1.52□□□□□ -2.17
YCL020WYCL020W GLG2P47011 380 aa1.52□□□□□ -2.17
YCL020WYCL020W COQ10Q08058 207 aa1.52□□□□□ -2.17
YCL020WYCL020W MHT1Q12525 324 aa1.52□□□□□ -2.17
YCL020WYCL020W MRP1P10662 321 aaKnown RBP1.51□□□□□ -2.17
YCL020WYCL020W BIG1P38813 335 aa1.51□□□□□ -2.17
YCL020WYCL020W RTT105P40063 208 aa1.51□□□□□ -2.17
YCL020WYCL020W SNZ2P53824 298 aa1.51□□□□□ -2.17
YCL020WYCL020W YKR104WP0CE69 306 aa1.5□□□□□ -2.17
YCL020WYCL020W VPS3P23643 1011 aa1.5□□□□□ -2.17
YCL020WYCL020W SSH1P38353 490 aaKnown RBP1.5□□□□□ -2.17
YCL020WYCL020W YHR125WP38831 101 aa1.5□□□□□ -2.17
YCL020WYCL020W YAR1P46683 200 aa1.5□□□□□ -2.17
YCL020WYCL020W GPI8P49018 411 aa1.5□□□□□ -2.17
YCL020WYCL020W ASI3P53983 676 aa1.5□□□□□ -2.17
YCL020WYCL020W YLR030WQ07967 263 aa1.5□□□□□ -2.17
YCL020WYCL020W YOL107WQ12239 342 aa1.5□□□□□ -2.17
YCL020WYCL020W RPL24AP04449 155 aaKnown RBP1.49□□□□□ -2.17
YCL020WYCL020W ADH3P07246 375 aaKnown RBP1.49□□□□□ -2.17
YCL020WYCL020W PUT1P09368 476 aa1.49□□□□□ -2.17
YCL020WYCL020W GOS1P38736 223 aa1.49□□□□□ -2.17
YCL020WYCL020W YGL159WP53110 370 aa1.49□□□□□ -2.17
YCL020WYCL020W MRH4P53166 561 aa1.49□□□□□ -2.17
YCL020WYCL020W MPP6P53725 186 aaPredicted RBP1.49□□□□□ -2.17
YCL020WYCL020W YDR209CQ03480 137 aa1.49□□□□□ -2.17
YCL020WYCL020W GOT1Q03554 138 aa1.49□□□□□ -2.17
YCL020WYCL020W ADH6Q04894 360 aaKnown RBP1.49□□□□□ -2.17
YCL020WYCL020W Q0255P03881 472 aa1.48□□□□□ -2.17
YCL020WYCL020W DAL82P21705 255 aa1.48□□□□□ -2.17
YCL020WYCL020W ERG24P32462 438 aaKnown RBP1.48□□□□□ -2.17
YCL020WYCL020W ARC15P40518 154 aaRIP-Chip data1.48□□□□□ -2.17not detected
YCL020WYCL020W YDR124WQ04608 324 aa1.48□□□□□ -2.17
YCL020WYCL020W YPR098CQ06089 161 aa1.48□□□□□ -2.17
YCL020WYCL020W ATG17Q06410 417 aa1.48□□□□□ -2.17
YCL020WYCL020W RRP40Q08285 240 aaKnown RBP1.48□□□□□ -2.17
YCL020WYCL020W YOR029WQ12243 111 aa1.48□□□□□ -2.17
YCL020WYCL020W COX5AP00424 153 aa1.47□□□□□ -2.17
YCL020WYCL020W TCP1P12612 559 aaKnown RBP1.47□□□□□ -2.17
YCL020WYCL020W CCA1P21269 546 aa1.47□□□□□ -2.17
YCL020WYCL020W HOM6P31116 359 aaKnown RBP1.47□□□□□ -2.17
YCL020WYCL020W RPT5P33297 434 aaKnown RBP1.47□□□□□ -2.17
YCL020WYCL020W YER189WP40104 122 aa1.47□□□□□ -2.17
YCL020WYCL020W SPG4Q04438 115 aa1.47□□□□□ -2.17
YCL020WYCL020W BTS1Q12051 335 aa1.47□□□□□ -2.17
YCL020WYCL020W ATO3Q12359 275 aa1.47□□□□□ -2.17
YCL020WYCL020W RRP36Q12481 300 aaPredicted RBP1.47□□□□□ -2.17
YCL020WYCL020W SNF8Q12483 233 aa1.47□□□□□ -2.17
YCL020WYCL020W SGE1P33335 543 aa1.46□□□□□ -2.18
YCL020WYCL020W COS8P38723 381 aa1.46□□□□□ -2.18
YCL020WYCL020W SDO1Q07953 250 aaKnown RBP1.46□□□□□ -2.18
YCL020WYCL020W MSA1Q08471 629 aa1.46□□□□□ -2.18
YCL020WYCL020W SYC1Q08553 188 aaPredicted RBP1.46□□□□□ -2.18
YCL020WYCL020W YOR186WQ08560 144 aa1.46□□□□□ -2.18
YCL020WYCL020W AKR2Q12013 749 aa1.46□□□□□ -2.18
YCL020WYCL020W YLR462WO13556 202 aa1.45□□□□□ -2.18
YCL020WYCL020W SCL1P21243 252 aaKnown RBP1.45□□□□□ -2.18
YCL020WYCL020W YEL075CP39972 122 aa1.45□□□□□ -2.18
YCL020WYCL020W AYR1P40471 297 aa1.45□□□□□ -2.18
YCL020WYCL020W JHD2P47156 728 aaPredicted RBP1.45□□□□□ -2.18
YCL020WYCL020W USE1P53146 245 aa1.45□□□□□ -2.18
YCL020WYCL020W RHO3Q00245 231 aaKnown RBP1.45□□□□□ -2.18
YCL020WYCL020W MRPS8Q03799 155 aa1.45□□□□□ -2.18
YCL020WYCL020W KAP95Q06142 861 aaKnown RBP1.45□□□□□ -2.18
YCL020WYCL020W YPL229WQ99395 206 aa1.45□□□□□ -2.18
YCL020WYCL020W MSF1P08425 469 aa1.44□□□□□ -2.18
YCL020WYCL020W MRX3P38172 270 aa1.44□□□□□ -2.18
YCL020WYCL020W YHB1P39676 399 aaKnown RBP1.44□□□□□ -2.18
YCL020WYCL020W RRT8Q08219 342 aa1.44□□□□□ -2.18
YCL020WYCL020W RRS1Q08746 203 aaKnown RBP1.44□□□□□ -2.18
YCL020WYCL020W DSF1P0CX08 502 aa1.43□□□□□ -2.18
YCL020WYCL020W YNR073CP0CX09 502 aa1.43□□□□□ -2.18
YCL020WYCL020W RPS5P26783 225 aaKnown RBP1.43□□□□□ -2.18
YCL020WYCL020W PEX4P29340 183 aa1.43□□□□□ -2.18
YCL020WYCL020W VMA11P32842 164 aa1.43□□□□□ -2.18
YCL020WYCL020W MRPL39P36533 70 aa1.43□□□□□ -2.18
YCL020WYCL020W THO1P40040 218 aaKnown RBP1.43□□□□□ -2.18
YCL020WYCL020W YNL046WP53956 172 aa1.43□□□□□ -2.18
YCL020WYCL020W YHR139C-AO13536 103 aa1.42□□□□□ -2.18
YCL020WYCL020W EBP2P36049 427 aaKnown RBP1.42□□□□□ -2.18
YCL020WYCL020W CIS3P47001 227 aa1.42□□□□□ -2.18
YCL020WYCL020W YNL134CP53912 376 aaKnown RBP1.42□□□□□ -2.18
YCL020WYCL020W INM2Q05533 292 aa1.42□□□□□ -2.18
YCL020WYCL020W MSH5Q12175 901 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms