RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDB1	YBR221C	YKL075C	P36083	450 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	MRPL28	P36527	147 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	IPI1	P38803	334 aa	Predicted RBP	4.98	□□□□□ -1.61
PDB1	YBR221C	AZF1	P41696	914 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	YCH1	P42937	148 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	TRM9	P49957	279 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	SMM1	P53720	384 aa	Known RBP	4.98	□□□□□ -1.61
PDB1	YBR221C	DID2	P69771	204 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	STP1	Q00947	519 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	CCE1	Q03702	353 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	HNT1	Q04344	158 aa	Known RBP	4.98	□□□□□ -1.61
PDB1	YBR221C	YLR346C	Q06139	101 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	OPT2	Q06593	877 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	MCH4	Q08268	501 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	RTR2	Q12378	196 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	YOP1	Q12402	180 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	YDL199C	Q12407	687 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	NPC2	Q12408	173 aa		4.98	□□□□□ -1.61
PDB1	YBR221C	RAS1	P01119	309 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	YOL163W	P0CF20	169 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	TFS1	P14306	219 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	HEM15	P16622	393 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	PHO80	P20052	293 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	SCL1	P21243	252 aa	Known RBP	4.97	□□□□□ -1.61
PDB1	YBR221C	EXG1	P23776	448 aa	Known RBP	4.97	□□□□□ -1.61
PDB1	YBR221C	RPL16B	P26785	198 aa	Known RBP	4.97	□□□□□ -1.61
PDB1	YBR221C	OCH1	P31755	480 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	YBL010C	P32788	280 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	SUI1	P32911	108 aa	Known RBP	4.97	□□□□□ -1.61
PDB1	YBR221C	ROT2	P38138	954 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	ECM33	P38248	429 aa	Known RBP	4.97	□□□□□ -1.61
PDB1	YBR221C	SDS24	P38314	527 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	POP4	P38336	279 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	NVJ1	P38881	321 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	KRE29	P40026	464 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	MAM33	P40513	266 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	GAT1	P43574	510 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	AVT1	P47082	602 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	CPR7	P47103	393 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	GTF1	P53260	183 aa	Predicted RBP	4.97	□□□□□ -1.61
PDB1	YBR221C	BUD32	P53323	261 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	IMP4	P53941	290 aa	Known RBP	4.97	□□□□□ -1.61
PDB1	YBR221C	SWP1	Q02795	286 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	YMR166C	Q03829	368 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	YLR030W	Q07967	263 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	THP3	Q12049	470 aa	Known RBP	4.97	□□□□□ -1.61
PDB1	YBR221C	YLR049C	Q12110	428 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	ERV2	Q12284	196 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	RAX2	Q12465	1220 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	BI3	Q9ZZW7	517 aa		4.97	□□□□□ -1.61
PDB1	YBR221C	CYC1	P00044	109 aa	Predicted RBP	4.96	□□□□□ -1.62
PDB1	YBR221C	SUC2	P00724	532 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	SPO11	P23179	398 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	CLB2	P24869	491 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	RNA14	P25298	677 aa	Known RBP	4.96	□□□□□ -1.62
PDB1	YBR221C	YCR023C	P25351	611 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	TRX3	P25372	127 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	THI80	P35202	319 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	RIM2	P38127	377 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	RCK1	P38622	512 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	YPT35	P38815	214 aa	Known RBP	4.96	□□□□□ -1.62
PDB1	YBR221C	MNN10	P50108	393 aa	Known RBP	4.96	□□□□□ -1.62
PDB1	YBR221C	PCP1	P53259	346 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	RAV2	Q03956	351 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	BNA5	Q05979	453 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	YPR098C	Q06089	161 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	TDA6	Q06466	467 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	THI72	Q08579	599 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	TAF10	Q12030	206 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	YDL009C	Q12210	107 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	PST2	Q12335	198 aa	Known RBP	4.96	□□□□□ -1.62
PDB1	YBR221C	PEX11	Q12462	236 aa		4.96	□□□□□ -1.62
PDB1	YBR221C	FCY2	P17064	533 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	FUN26	P31381	517 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	MRPL3	P36516	390 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	FRM2	P37261	193 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	TRM7	P38238	310 aa	Known RBP	4.95	□□□□□ -1.62
PDB1	YBR221C	MTC4	P38335	694 aa	Known RBP	4.95	□□□□□ -1.62
PDB1	YBR221C	MED6	P38782	295 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	FAU1	P40099	211 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	RIO2	P40160	425 aa	Known RBP	4.95	□□□□□ -1.62
PDB1	YBR221C	PDS1	P40316	373 aa	Predicted RBP	4.95	□□□□□ -1.62
PDB1	YBR221C	MOB2	P43563	287 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	VPS25	P47142	202 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	CDH1	P53197	566 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	YGR151C	P53287	111 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	SAE3	P89114	91 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	RHO3	Q00245	231 aa	Known RBP	4.95	□□□□□ -1.62
PDB1	YBR221C	SPR6	Q01684	191 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	YDR476C	Q03362	224 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	PRP11	Q07350	266 aa	Predicted RBP	4.95	□□□□□ -1.62
PDB1	YBR221C	YOL024W	Q08172	172 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	YLR126C	Q12288	251 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	UTP23	Q12339	254 aa	Known RBP	4.95	□□□□□ -1.62
PDB1	YBR221C	NCA2	Q12374	616 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	YPR064W	Q12492	139 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	YIR021W-A	Q3E739	70 aa		4.95	□□□□□ -1.62
PDB1	YBR221C	DET1	Q99288	334 aa	Known RBP	4.95	□□□□□ -1.62
PDB1	YBR221C	BAR1	P12630	587 aa		4.94	□□□□□ -1.62
PDB1	YBR221C	STE4	P18851	423 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 109.1 ms