RNA–Protein interactions for RNA: YBL048W

RRT1, Transcript of Protein of unknown function, yeast

Gene RRT1, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT1	YBL048W	YGL034C	P53186	121 aa		0.83	□□□□□ -2.28
RRT1	YBL048W	RSM10	Q03201	203 aa		0.83	□□□□□ -2.28
RRT1	YBL048W	YDR209C	Q03480	137 aa		0.83	□□□□□ -2.28
RRT1	YBL048W	PEX12	Q04370	399 aa		0.83	□□□□□ -2.28
RRT1	YBL048W	YLR179C	Q06252	201 aa	Known RBP	0.83	□□□□□ -2.28
RRT1	YBL048W	ATG17	Q06410	417 aa		0.83	□□□□□ -2.28
RRT1	YBL048W	YPR147C	Q06522	304 aa	Known RBP	0.83	□□□□□ -2.28
RRT1	YBL048W	BTS1	Q12051	335 aa		0.83	□□□□□ -2.28
RRT1	YBL048W	RRP36	Q12481	300 aa	Predicted RBP	0.83	□□□□□ -2.28
RRT1	YBL048W	INO80	P53115	1489 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	SGA1	P08019	549 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	YKR104W	P0CE69	306 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
RRT1	YBL048W	YOR062C	P36025	268 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	JEN1	P36035	616 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	SSH1	P38353	490 aa	Known RBP	0.82	□□□□□ -2.28
RRT1	YBL048W	BIG1	P38813	335 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	SMB1	P40018	196 aa	Known RBP	0.82	□□□□□ -2.28
RRT1	YBL048W	ASI3	P53983	676 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	GOT1	Q03554	138 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	YDR124W	Q04608	324 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	INM2	Q05533	292 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	YPR098C	Q06089	161 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	KAP95	Q06142	861 aa	Known RBP	0.82	□□□□□ -2.28
RRT1	YBL048W	RRP40	Q08285	240 aa	Known RBP	0.82	□□□□□ -2.28
RRT1	YBL048W	YOL107W	Q12239	342 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	BBP1	Q12365	385 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	SNF8	Q12483	233 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	BOL1	Q3E793	110 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	SAS5	Q99314	248 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	SWI1	P09547	1314 aa		0.82	□□□□□ -2.28
RRT1	YBL048W	MSF1	P08425	469 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	RSR1	P13856	272 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	RNA15	P25299	296 aa	Predicted RBP	0.81	□□□□□ -2.28
RRT1	YBL048W	YCR102C	P25608	368 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	EHD3	P28817	500 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	HOM6	P31116	359 aa	Known RBP	0.81	□□□□□ -2.28
RRT1	YBL048W	SGE1	P33335	543 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	RCN1	P36054	211 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	PRS4	P38063	326 aa	Predicted RBP	0.81	□□□□□ -2.28
RRT1	YBL048W	MRX3	P38172	270 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	YBR096W	P38256	230 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	AYR1	P40471	297 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	SNZ3	P43545	298 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	OST2	P46964	130 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	GLG2	P47011	380 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	SNX4	P47057	423 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	USE1	P53146	245 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	MRH4	P53166	561 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	CTF19	Q02732	369 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	SPG4	Q04438	115 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	COQ10	Q08058	207 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	EMP46	Q12396	444 aa		0.81	□□□□□ -2.28
RRT1	YBL048W	SCM4	P32564	187 aa		0.8	□□□□□ -2.28
RRT1	YBL048W	RPT5	P33297	434 aa	Known RBP	0.8	□□□□□ -2.28
RRT1	YBL048W	GOS1	P38736	223 aa		0.8	□□□□□ -2.28
RRT1	YBL048W	YHB1	P39676	399 aa	Known RBP	0.8	□□□□□ -2.28
RRT1	YBL048W	YER189W	P40104	122 aa		0.8	□□□□□ -2.28
RRT1	YBL048W	ARC15	P40518	154 aa	RIP-Chip data	0.8	□□□□□ -2.28	not detected
RRT1	YBL048W	SNZ2	P53824	298 aa		0.8	□□□□□ -2.28
RRT1	YBL048W	RHO3	Q00245	231 aa	Known RBP	0.8	□□□□□ -2.28
RRT1	YBL048W	SDO1	Q07953	250 aa	Known RBP	0.8	□□□□□ -2.28
RRT1	YBL048W	RRT8	Q08219	342 aa		0.8	□□□□□ -2.28
RRT1	YBL048W	SYC1	Q08553	188 aa	Predicted RBP	0.8	□□□□□ -2.28
RRT1	YBL048W	MSH5	Q12175	901 aa		0.8	□□□□□ -2.28
RRT1	YBL048W	YOR029W	Q12243	111 aa		0.8	□□□□□ -2.28
RRT1	YBL048W	PUT1	P09368	476 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	YHR032W-A	P0C5N6	59 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	TCP1	P12612	559 aa	Known RBP	0.79	□□□□□ -2.28
RRT1	YBL048W	CCA1	P21269	546 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	DOA4	P32571	926 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	YUH1	P35127	236 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	MSA2	P36157	363 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	MRPL39	P36533	70 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	FZO1	P38297	855 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	COS8	P38723	381 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
RRT1	YBL048W	THO1	P40040	218 aa	Known RBP	0.79	□□□□□ -2.28
RRT1	YBL048W	SMD3	P43321	101 aa	Known RBP	0.79	□□□□□ -2.28
RRT1	YBL048W	BNA6	P43619	295 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	JHD2	P47156	728 aa	Predicted RBP	0.79	□□□□□ -2.28
RRT1	YBL048W	YGL159W	P53110	370 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	YNL134C	P53912	376 aa	Known RBP	0.79	□□□□□ -2.28
RRT1	YBL048W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
RRT1	YBL048W	YLR030W	Q07967	263 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	RRS1	Q08746	203 aa	Known RBP	0.79	□□□□□ -2.28
RRT1	YBL048W	CSM4	Q08955	156 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	YCT1	Q12235	531 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	SNU23	Q12368	194 aa	Predicted RBP	0.79	□□□□□ -2.28
RRT1	YBL048W	MHT1	Q12525	324 aa		0.79	□□□□□ -2.28
RRT1	YBL048W	YLR462W	O13556	202 aa		0.78	□□□□□ -2.28
RRT1	YBL048W	COX5A	P00424	153 aa		0.78	□□□□□ -2.28
RRT1	YBL048W	Q0255	P03881	472 aa		0.78	□□□□□ -2.28
RRT1	YBL048W	ERG24	P32462	438 aa	Known RBP	0.78	□□□□□ -2.28
RRT1	YBL048W	YHR125W	P38831	101 aa		0.78	□□□□□ -2.28
RRT1	YBL048W	YHR127W	P38833	243 aa	Known RBP	0.78	□□□□□ -2.28
RRT1	YBL048W	YEL075C	P39972	122 aa		0.78	□□□□□ -2.28
RRT1	YBL048W	YJR079W	P47126	109 aa		0.78	□□□□□ -2.28
RRT1	YBL048W	FAR8	Q05040	523 aa		0.78	□□□□□ -2.28
RRT1	YBL048W	YLR173W	Q06247	608 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms