RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 HOXA9P31269 272 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 TXLNAP40222 546 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 NUBP1P53384 320 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 NCKAP1LP55160 1127 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 UVSSAQ2YD98 709 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 LONRF3Q496Y0 759 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 FUT10Q6P4F1 479 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 GPR149Q86SP6 731 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 CD302Q8IX05 232 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 UBALD2Q8IYN6 164 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 PIK3R5Q8WYR1 880 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 STAMQ92783 540 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 ACAP3Q96P50 834 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 PPP1R10Q96QC0 940 aaKnown RBP12.27□□□□□ -0.45
CDH3-206ENST00000567674 RUSC1Q9BVN2 902 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 PARVGQ9HBI0 331 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 PCDHGC5Q9Y5F6 944 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 TRIOO75962 3097 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 PP2D1A8MPX8 630 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 RBAK-RBAKDNI3L0D1 243 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 PTGESO14684 152 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 TEX28O15482 410 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 CLDN3O15551 220 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 B4GALT3O60512 393 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 GLUD1P00367 558 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 MCL1Q07820 350 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 SLC39A14Q15043 492 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 PTPAQ15257 358 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 LILRA6Q6PI73 481 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.26□□□□□ -0.45
CDH3-206ENST00000567674 KCNK18Q7Z418 384 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 ACSF2Q96CM8 615 aaPredicted RBP12.26□□□□□ -0.45
CDH3-206ENST00000567674 HVCN1Q96D96 273 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 TTPALQ9BTX7 342 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 LRRC27Q9C0I9 530 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 IRF2BPLQ9H1B7 796 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 CNTN3Q9P232 1028 aa12.26□□□□□ -0.45
CDH3-206ENST00000567674 ZFP37Q9Y6Q3 630 aaPredicted RBP12.26□□□□□ -0.45
CDH3-206ENST00000567674 ZNF318Q5VUA4 2279 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 SMIM28A0A1B0GU29 152 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 ABLIM1O14639 778 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 XPOTO43592 962 aaKnown RBP12.25□□□□□ -0.45
CDH3-206ENST00000567674 STX6O43752 255 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 ADRB2P07550 413 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 HNRNPA1P09651 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDH3-206ENST00000567674 CYP3A5P20815 502 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 GTF2BQ00403 316 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 TCF15Q12870 199 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 CLUL1Q15846 466 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 UPP1Q16831 310 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 ZNF568Q3ZCX4 644 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 ARSHQ5FYA8 562 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 IER5LQ5T953 404 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 CCDC73Q6ZRK6 1079 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 ANKS3Q6ZW76 656 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 OTOP3Q7RTS5 596 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 TAS1R3Q7RTX0 852 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 KRI1Q8N9T8 703 aaKnown RBP12.25□□□□□ -0.45
CDH3-206ENST00000567674 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
CDH3-206ENST00000567674 RAD54LQ92698 747 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 TCHPQ9BT92 498 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 GPR62Q9BZJ7 368 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 CDT1Q9H211 546 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 CUEDC2Q9H467 287 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 PRG3Q9Y2Y8 225 aaPredicted RBP12.25□□□□□ -0.45
CDH3-206ENST00000567674 BACE2Q9Y5Z0 518 aa12.25□□□□□ -0.45
CDH3-206ENST00000567674 TDRD15B5MCY1 1934 aaKnown RBP12.25□□□□□ -0.45
CDH3-206ENST00000567674 VPS37CA5D8V6 355 aaPredicted RBP12.24□□□□□ -0.45
CDH3-206ENST00000567674 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 SYN3O14994 580 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 SLC16A4O15374 487 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 TRAK2O60296 914 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 PPP6R2O75170 966 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 CLTAP09496 248 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 EPCAMP16422 314 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 FGFR3P22607 806 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 NASPP49321 788 aaPredicted RBP12.24□□□□□ -0.45
CDH3-206ENST00000567674 ZXDAP98168 799 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 RESTQ13127 1097 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 ALCAMQ13740 583 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 NOLC1Q14978 699 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDH3-206ENST00000567674 SLFN12LQ6IEE8 588 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 HAUS6Q7Z4H7 955 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 SUGP1Q8IWZ8 645 aaKnown RBP12.24□□□□□ -0.45
CDH3-206ENST00000567674 APOL6Q9BWW8 343 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 BLOC1S4Q9NUP1 217 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDH3-206ENST00000567674 MTMR6Q9Y217 621 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 DERAQ9Y315 318 aa12.24□□□□□ -0.45
CDH3-206ENST00000567674 ARHGEF37A1IGU5 675 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 EDN1P05305 212 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 SSBP05455 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH3-206ENST00000567674 GAP43P17677 238 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 CA8P35219 290 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 SIGLEC14Q08ET2 396 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 RAB33AQ14088 237 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 POSTNQ15063 836 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 PTPN21Q16825 1174 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 EEF1DP3Q658K8 133 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 LLGL2Q6P1M3 1020 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms