RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 KIFC3Q9BVG8 833 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 GPR62Q9BZJ7 368 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 SSBP05455 408 aaKnown RBP eCLIP17.57■□□□□ 0.4
SGCE-208ENST00000450385 KCNE1P15382 129 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 RPL9P32969 192 aaKnown RBP17.57■□□□□ 0.4
SGCE-208ENST00000450385 DDIT3P35638 169 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 ZNF568Q3ZCX4 644 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 PIK3R5Q8WYR1 880 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 ACAP3Q96P50 834 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 TCHPQ9BT92 498 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 POMKQ9H5K3 350 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 PLEKHA5Q9HAU0 1116 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 ZDHHC7Q9NXF8 308 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 GDAQ9Y2T3 454 aa17.57■□□□□ 0.4
SGCE-208ENST00000450385 TECTAO75443 2155 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
SGCE-208ENST00000450385 C2CD2LO14523 706 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 SLC16A4O15374 487 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 CLDN3O15551 220 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 EDN1P05305 212 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 MAPTP10636 758 aaKnown RBP17.56■□□□□ 0.4
SGCE-208ENST00000450385 SYT1P21579 422 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 ZNF131P52739 623 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 SIGLEC14Q08ET2 396 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 PTPN21Q16825 1174 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 ARSHQ5FYA8 562 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 LILRA6Q6PI73 481 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
SGCE-208ENST00000450385 TRIM67Q6ZTA4 783 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 OTOP3Q7RTS5 596 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 TAS1R3Q7RTX0 852 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 STAMQ92783 540 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 SNX21Q969T3 373 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 CDT1Q9H211 546 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 PARVGQ9HBI0 331 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 POLD4Q9HCU8 107 aa17.56■□□□□ 0.4
SGCE-208ENST00000450385 SRPRBQ9Y5M8 271 aaKnown RBP17.56■□□□□ 0.4
SGCE-208ENST00000450385 DENND4AQ7Z401 1863 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 SMIM28A0A1B0GU29 152 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 K7ELQ4 463 aaPredicted RBP17.55■□□□□ 0.4
SGCE-208ENST00000450385 NCKAP1LP55160 1127 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 MCL1Q07820 350 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 UPP1Q16831 310 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 CCDC149Q6ZUS6 474 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 RIN2Q8WYP3 895 aaPredicted RBP17.55■□□□□ 0.4
SGCE-208ENST00000450385 NXPE3Q969Y0 559 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 PRRX2Q99811 253 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 TARS2Q9BW92 718 aaKnown RBP17.55■□□□□ 0.4
SGCE-208ENST00000450385 MAN1C1Q9NR34 630 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 CCDC39Q9UFE4 941 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 SORCS3Q9UPU3 1222 aa17.55■□□□□ 0.4
SGCE-208ENST00000450385 PLXNA3P51805 1871 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 C2orf16Q68DN1 1984 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 CCDC195A0A1B0GUA6 201 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 CASTOR2A6NHX0 329 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 SFI1A8K8P3 1242 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 ABLIM1O14639 778 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 B3GAT3O94766 335 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 TXLNAP40222 546 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 POU5F1Q01860 360 aaKnown RBP17.54■□□□□ 0.4
SGCE-208ENST00000450385 NOLC1Q14978 699 aaKnown RBP eCLIP17.54■□□□□ 0.4
SGCE-208ENST00000450385 UVSSAQ2YD98 709 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 FAM171A1Q5VUB5 890 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 TMC5Q6UXY8 1006 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 C12orf76Q8N812 135 aaPredicted RBP17.54■□□□□ 0.4
SGCE-208ENST00000450385 TDRD5Q8NAT2 981 aaKnown RBP17.54■□□□□ 0.4
SGCE-208ENST00000450385 RASSF8Q8NHQ8 419 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 RAD54LQ92698 747 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 APOL5Q9BWW9 433 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 BLOC1S4Q9NUP1 217 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 CNTN3Q9P232 1028 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 STK17AQ9UEE5 414 aa17.54■□□□□ 0.4
SGCE-208ENST00000450385 FAM86C2PA6NEL3 165 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 TMEM221A6NGB7 291 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 M0R296 226 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 TGM5O43548 720 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 KIF4AO95239 1232 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 PIGRP01833 764 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 POU2F2P09086 479 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 HNRNPA1P09651 372 aaKnown RBP eCLIP17.53■□□□□ 0.4
SGCE-208ENST00000450385 FGFR3P22607 806 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 PAX3P23760 479 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 HOXA9P31269 272 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 MTMR3Q13615 1198 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 PTPAQ15257 358 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 ANKS3Q6ZW76 656 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 HAUS6Q7Z4H7 955 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 GPBP1Q86WP2 473 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 LNX1Q8TBB1 728 aaPredicted RBP17.53■□□□□ 0.4
SGCE-208ENST00000450385 LARP4BQ92615 738 aaKnown RBP17.53■□□□□ 0.4
SGCE-208ENST00000450385 PAAF1Q9BRP4 392 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 ST6GALNAC4Q9H4F1 302 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 WDR6Q9NNW5 1121 aaKnown RBP17.53■□□□□ 0.4
SGCE-208ENST00000450385 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.53■□□□□ 0.4
SGCE-208ENST00000450385 USP20Q9Y2K6 914 aa17.53■□□□□ 0.4
SGCE-208ENST00000450385 ZFP37Q9Y6Q3 630 aaPredicted RBP17.53■□□□□ 0.4
SGCE-208ENST00000450385 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.4
SGCE-208ENST00000450385 C2CD4DB7Z1M9 353 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 STX6O43752 255 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms