RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 HOC1P47124 396 aa2.33□□□□□ -2.04
snR35snR35 AAH1P53909 347 aa2.33□□□□□ -2.04
snR35snR35 YCT1Q12235 531 aa2.33□□□□□ -2.04
snR35snR35 IES3Q12345 250 aa2.33□□□□□ -2.04
snR35snR35 ATG5Q12380 294 aa2.33□□□□□ -2.04
snR35snR35 RPO26P20435 155 aa2.32□□□□□ -2.04
snR35snR35 RPS5P26783 225 aaKnown RBP2.32□□□□□ -2.04
snR35snR35 BMH1P29311 267 aaKnown RBP2.32□□□□□ -2.04
snR35snR35 BMH2P34730 273 aaKnown RBP2.32□□□□□ -2.04
snR35snR35 AST1P35183 429 aa2.32□□□□□ -2.04
snR35snR35 CSG2P35206 410 aa2.32□□□□□ -2.04
snR35snR35 JEN1P36035 616 aa2.32□□□□□ -2.04
snR35snR35 LDB7P38210 180 aa2.32□□□□□ -2.04
snR35snR35 RTR1P40084 226 aaPredicted RBP2.32□□□□□ -2.04
snR35snR35 YPR098CQ06089 161 aa2.32□□□□□ -2.04
snR35snR35 PRR2Q12310 699 aa2.32□□□□□ -2.04
snR35snR35 SNU23Q12368 194 aaPredicted RBP2.32□□□□□ -2.04
snR35snR35 CFT1Q06632 1357 aaKnown RBP2.32□□□□□ -2.04
snR35snR35 YEL009C-AA0A023PZF2 135 aa2.31□□□□□ -2.04
snR35snR35 COS2P0CX12 379 aa2.31□□□□□ -2.04
snR35snR35 COS3P0CX13 379 aa2.31□□□□□ -2.04
snR35snR35 ZWF1P11412 505 aaKnown RBP2.31□□□□□ -2.04
snR35snR35 MRPL25P23369 157 aa2.31□□□□□ -2.04
snR35snR35 NTG1P31378 399 aa2.31□□□□□ -2.04
snR35snR35 ARN2P38724 620 aa2.31□□□□□ -2.04
snR35snR35 BFR1P38934 470 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
snR35snR35 SUR2P38992 349 aa2.31□□□□□ -2.04
snR35snR35 THO1P40040 218 aaKnown RBP2.31□□□□□ -2.04
snR35snR35 OTU1P43558 301 aa2.31□□□□□ -2.04
snR35snR35 YJR079WP47126 109 aa2.31□□□□□ -2.04
snR35snR35 CWC21Q03375 135 aaKnown RBP2.31□□□□□ -2.04
snR35snR35 MYO5Q04439 1219 aaKnown RBP2.31□□□□□ -2.04
snR35snR35 YDR222WQ04925 415 aa2.31□□□□□ -2.04
snR35snR35 COQ10Q08058 207 aa2.31□□□□□ -2.04
snR35snR35 YPL150WQ12152 901 aa2.31□□□□□ -2.04
snR35snR35 YPR063CQ12160 140 aa2.31□□□□□ -2.04
snR35snR35 SMT3Q12306 101 aaKnown RBP2.31□□□□□ -2.04
snR35snR35 YDL012CQ12489 107 aa2.31□□□□□ -2.04
snR35snR35 ISD11Q6Q560 94 aa2.31□□□□□ -2.04
snR35snR35 YKR104WP0CE69 306 aa2.3□□□□□ -2.04
snR35snR35 DPB2P24482 689 aaPredicted RBP2.3□□□□□ -2.04
snR35snR35 EHD3P28817 500 aa2.3□□□□□ -2.04
snR35snR35 YBL081WP38180 368 aaKnown RBP2.3□□□□□ -2.04
snR35snR35 ECM14P38836 430 aa2.3□□□□□ -2.04
snR35snR35 SPL2P38839 148 aa2.3□□□□□ -2.04
snR35snR35 MSS2P40990 351 aa2.3□□□□□ -2.04
snR35snR35 BUD13P46947 266 aaPredicted RBP2.3□□□□□ -2.04
snR35snR35 RPC17P47076 161 aa2.3□□□□□ -2.04
snR35snR35 JHD2P47156 728 aaPredicted RBP2.3□□□□□ -2.04
snR35snR35 OST3P48439 350 aa2.3□□□□□ -2.04
snR35snR35 MRH4P53166 561 aa2.3□□□□□ -2.04
snR35snR35 NOP13P53883 403 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
snR35snR35 SPO77Q06134 477 aa2.3□□□□□ -2.04
snR35snR35 YPR147CQ06522 304 aaKnown RBP2.3□□□□□ -2.04
snR35snR35 PLB3Q08108 686 aa2.3□□□□□ -2.04
snR35snR35 NUP157P40064 1391 aaKnown RBP2.3□□□□□ -2.04
snR35snR35 MATALPHA1P0CY06 175 aa2.29□□□□□ -2.04
snR35snR35 HMLALPHA1P0CY07 175 aa2.29□□□□□ -2.04
snR35snR35 TCP1P12612 559 aaKnown RBP2.29□□□□□ -2.04
snR35snR35 RPL24BP24000 155 aaKnown RBP2.29□□□□□ -2.04
snR35snR35 SGE1P33335 543 aa2.29□□□□□ -2.04
snR35snR35 YKL075CP36083 450 aa2.29□□□□□ -2.04
snR35snR35 YBR096WP38256 230 aa2.29□□□□□ -2.04
snR35snR35 GOS1P38736 223 aa2.29□□□□□ -2.04
snR35snR35 TEM1P38987 245 aa2.29□□□□□ -2.04
snR35snR35 YIL059CP40520 121 aa2.29□□□□□ -2.04
snR35snR35 ECO1P43605 281 aa2.29□□□□□ -2.04
snR35snR35 YPL039WQ03080 316 aa2.29□□□□□ -2.04
snR35snR35 YMR166CQ03829 368 aa2.29□□□□□ -2.04
snR35snR35 SPG4Q04438 115 aa2.29□□□□□ -2.04
snR35snR35 YDR124WQ04608 324 aa2.29□□□□□ -2.04
snR35snR35 GTO3Q04806 366 aa2.29□□□□□ -2.04
snR35snR35 RRP40Q08285 240 aaKnown RBP2.29□□□□□ -2.04
snR35snR35 RRS1Q08746 203 aaKnown RBP2.29□□□□□ -2.04
snR35snR35 YPS3Q12303 508 aa2.29□□□□□ -2.04
snR35snR35 PAN1P32521 1480 aa2.28□□□□□ -2.04
snR35snR35 RPB4P20433 221 aaPredicted RBP2.28□□□□□ -2.04
snR35snR35 FMT1P32785 401 aa2.28□□□□□ -2.04
snR35snR35 SFC1P33303 322 aa2.28□□□□□ -2.04
snR35snR35 TKL2P33315 681 aa2.28□□□□□ -2.04
snR35snR35 VPS21P36017 210 aaKnown RBP2.28□□□□□ -2.04
snR35snR35 DRE2P36152 348 aa2.28□□□□□ -2.04
snR35snR35 MRPL39P36533 70 aa2.28□□□□□ -2.04
snR35snR35 CUE1P38428 203 aa2.28□□□□□ -2.04
snR35snR35 YHB1P39676 399 aaKnown RBP2.28□□□□□ -2.04
snR35snR35 NIF3P53081 288 aa2.28□□□□□ -2.04
snR35snR35 ALG9P53868 555 aaKnown RBP2.28□□□□□ -2.04
snR35snR35 RHO3Q00245 231 aaKnown RBP2.28□□□□□ -2.04
snR35snR35 CTF19Q02732 369 aa2.28□□□□□ -2.04
snR35snR35 SYC1Q08553 188 aaPredicted RBP2.28□□□□□ -2.04
snR35snR35 NOP1P15646 327 aaKnown RBP2.27□□□□□ -2.05
snR35snR35 YCR102CP25608 368 aa2.27□□□□□ -2.05
snR35snR35 PPA2P28239 310 aa2.27□□□□□ -2.05
snR35snR35 VMA6P32366 345 aaKnown RBP2.27□□□□□ -2.05
snR35snR35 AGA2P32781 87 aa2.27□□□□□ -2.05
snR35snR35 PRY2P36110 329 aa2.27□□□□□ -2.05
snR35snR35 ECM13P38195 257 aa2.27□□□□□ -2.05
snR35snR35 YHR127WP38833 243 aaKnown RBP2.27□□□□□ -2.05
snR35snR35 COX15P40086 486 aa2.27□□□□□ -2.05
snR35snR35 PRE6P40303 254 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms