RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeast

Gene SGF11, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGF11	YPL047W	EMP46	Q12396	444 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	MHT1	Q12525	324 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	AI5_BETA	Q9ZZX0	354 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	CAR2	P07991	424 aa	Known RBP	0.43	□□□□□ -2.34
SGF11	YPL047W	DDI2	P0CH63	225 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	DDI3	P0CH64	225 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.43	□□□□□ -2.34	not detected
SGF11	YPL047W	UPS2	P35200	230 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	PRM9	P39551	298 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	SSO2	P39926	295 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	BMT5	P40493	336 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	AGP3	P43548	558 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	YJR079W	P47126	109 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	RIB4	P50861	169 aa	Predicted RBP	0.43	□□□□□ -2.34
SGF11	YPL047W	ERG25	P53045	309 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	SLX9	P53251	210 aa	Predicted RBP	0.43	□□□□□ -2.34
SGF11	YPL047W	BOP2	Q06150	570 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	ASR1	Q06834	288 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	RIO1	Q12196	484 aa	Known RBP	0.43	□□□□□ -2.34
SGF11	YPL047W	PST1	Q12355	444 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	YOS9	Q99220	542 aa		0.43	□□□□□ -2.34
SGF11	YPL047W	Q0255	P03881	472 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	RPL2A	P0CX45	254 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	RPL2B	P0CX46	254 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	RPL4A	P10664	362 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	FPR1	P20081	114 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	SAR1	P20606	190 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	KDX1	P36005	433 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	EBP2	P36049	427 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	MAL32	P38158	584 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	PHO88	P38264	188 aa	Predicted RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	COS8	P38723	381 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	SVP26	P38869	228 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	VTC1	P40046	129 aa	RIP-Chip data	0.42	□□□□□ -2.34	not detected
SGF11	YPL047W	RPL13B	P40212	199 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	SER33	P40510	469 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	YIA6	P40556	373 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	RPL4B	P49626	362 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	NBP35	P52920	328 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	YGR026W	P53217	278 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	MAL12	P53341	584 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	BUD25	P85052	153 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	CTF19	Q02732	369 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	YMR279C	Q03263	540 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	MRPS8	Q03799	155 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	EMI1	Q04406	187 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	YLR297W	Q05899	129 aa		0.42	□□□□□ -2.34
SGF11	YPL047W	BER1	Q06688	274 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	USB1	Q12208	290 aa	Known RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	RPL13A	Q12690	199 aa	Predicted RBP	0.42	□□□□□ -2.34
SGF11	YPL047W	ILV1	P00927	576 aa	Known RBP	0.41	□□□□□ -2.34
SGF11	YPL047W	CWP1	P28319	239 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	RPC25	P35718	212 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	YHL049C	P38722	271 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	YHR022C	P38763	256 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	TDA11	P38854	504 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	CTR2	P38865	189 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	END3	P39013	349 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	ARC15	P40518	154 aa	RIP-Chip data	0.41	□□□□□ -2.34	not detected
SGF11	YPL047W	YKE4	P40544	346 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	KEL2	P50090	882 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	VOA1	P53262	265 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	SWS2	P53937	143 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	RRG8	Q06109	277 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	YLR162W	Q06235	118 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	BCP1	Q06338	283 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	AKR2	Q12013	749 aa		0.41	□□□□□ -2.34
SGF11	YPL047W	CPA1	P07258	411 aa	Known RBP	0.4	□□□□□ -2.35
SGF11	YPL047W	SMI1	P32566	505 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	RCN1	P36054	211 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	PRS4	P38063	326 aa	Predicted RBP	0.4	□□□□□ -2.35
SGF11	YPL047W	YBR219C	P38317	127 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	HIS2	P38635	335 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	APE4	P38821	490 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	SHC1	P39000	512 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	PEX31	P53203	462 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	ARP5	P53946	755 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	PRO2	P54885	456 aa	Known RBP	0.4	□□□□□ -2.35
SGF11	YPL047W	CYT2	Q00873	224 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	VBA1	Q04301	562 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	YMR111C	Q04461	462 aa	Predicted RBP	0.4	□□□□□ -2.35
SGF11	YPL047W	SFH1	Q06168	426 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	CUR1	Q06469	252 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	VAC14	Q06708	880 aa		0.4	□□□□□ -2.35
SGF11	YPL047W	COX5A	P00424	153 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	VAR1	P02381	398 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	RPP0	P05317	312 aa	Known RBP	0.39	□□□□□ -2.35
SGF11	YPL047W	YER188C-A	P0C0V2	99 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	SWI3	P32591	825 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	TCD1	P38756	429 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	MNN9	P39107	395 aa	Known RBP	0.39	□□□□□ -2.35
SGF11	YPL047W	PRM10	P42946	383 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	TIM21	P53220	239 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	YGR219W	P53307	113 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	MNT4	P53745	580 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	CSI2	Q08054	341 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	SLD7	Q08457	257 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	POM33	Q12164	279 aa		0.39	□□□□□ -2.35
SGF11	YPL047W	SME1	Q12330	94 aa	Predicted RBP	0.39	□□□□□ -2.35
SGF11	YPL047W	UBR2	Q07963	1872 aa		0.38	□□□□□ -2.35

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