RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W PLB3Q08108 686 aa2.11□□□□□ -2.07
SRP1YNL189W STH1P32597 1359 aa2.11□□□□□ -2.07
SRP1YNL189W NUP157P40064 1391 aaKnown RBP2.11□□□□□ -2.07
SRP1YNL189W EHD3P28817 500 aa2.1□□□□□ -2.07
SRP1YNL189W QRI5P32344 111 aa2.1□□□□□ -2.07
SRP1YNL189W COY1P34237 679 aa2.1□□□□□ -2.07
SRP1YNL189W BIG1P38813 335 aa2.1□□□□□ -2.07
SRP1YNL189W YJR012CP47087 207 aa2.1□□□□□ -2.07
SRP1YNL189W ALG11P53954 548 aaKnown RBP2.1□□□□□ -2.07
SRP1YNL189W NOT5Q12514 560 aaPredicted RBP2.1□□□□□ -2.07
SRP1YNL189W CWP1P28319 239 aa2.09□□□□□ -2.07
SRP1YNL189W PET100P38958 111 aa2.09□□□□□ -2.07
SRP1YNL189W YJL028WP47062 111 aa2.09□□□□□ -2.07
SRP1YNL189W NIF3P53081 288 aa2.09□□□□□ -2.07
SRP1YNL189W YPL119C-AQ3E751 87 aa2.09□□□□□ -2.07
SRP1YNL189W RAD10P06838 210 aa2.09□□□□□ -2.08
SRP1YNL189W MSF1P08425 469 aa2.09□□□□□ -2.08
SRP1YNL189W RRT12P25381 491 aa2.09□□□□□ -2.08
SRP1YNL189W YUH1P35127 236 aa2.09□□□□□ -2.08
SRP1YNL189W PRS2P38620 318 aaKnown RBP2.09□□□□□ -2.08
SRP1YNL189W SHC1P39000 512 aa2.09□□□□□ -2.08
SRP1YNL189W YGL034CP53186 121 aa2.09□□□□□ -2.08
SRP1YNL189W CTF19Q02732 369 aa2.09□□□□□ -2.08
SRP1YNL189W EMI1Q04406 187 aa2.09□□□□□ -2.08
SRP1YNL189W BTS1Q12051 335 aa2.09□□□□□ -2.08
SRP1YNL189W YPL247CQ12523 523 aa2.09□□□□□ -2.08
SRP1YNL189W ISD11Q6Q560 94 aa2.09□□□□□ -2.08
SRP1YNL189W RSR1P13856 272 aa2.08□□□□□ -2.08
SRP1YNL189W DAL82P21705 255 aa2.08□□□□□ -2.08
SRP1YNL189W RSA4P25382 515 aaKnown RBP2.08□□□□□ -2.08
SRP1YNL189W CAB3P36076 571 aa2.08□□□□□ -2.08
SRP1YNL189W YKR032WP36127 104 aa2.08□□□□□ -2.08
SRP1YNL189W YHI9P38765 294 aa2.08□□□□□ -2.08
SRP1YNL189W SMB1P40018 196 aaKnown RBP2.08□□□□□ -2.08
SRP1YNL189W DSN1P40568 576 aa2.08□□□□□ -2.08
SRP1YNL189W RPL10P41805 221 aaKnown RBP2.08□□□□□ -2.08
SRP1YNL189W MDM34P53083 459 aa2.08□□□□□ -2.08
SRP1YNL189W IGO1P53897 168 aa2.08□□□□□ -2.08
SRP1YNL189W PEX10Q05568 337 aa2.08□□□□□ -2.08
SRP1YNL189W RDS3Q06835 107 aaPredicted RBP2.08□□□□□ -2.08
SRP1YNL189W YOR268CQ08734 132 aa2.08□□□□□ -2.08
SRP1YNL189W YOR029WQ12243 111 aa2.08□□□□□ -2.08
SRP1YNL189W YEL009C-AA0A023PZF2 135 aa2.07□□□□□ -2.08
SRP1YNL189W MRP1P10662 321 aaKnown RBP2.07□□□□□ -2.08
SRP1YNL189W YBR096WP38256 230 aa2.07□□□□□ -2.08
SRP1YNL189W GLG2P47011 380 aa2.07□□□□□ -2.08
SRP1YNL189W SYF2P53277 215 aaPredicted RBP2.07□□□□□ -2.08
SRP1YNL189W YNL134CP53912 376 aaKnown RBP2.07□□□□□ -2.08
SRP1YNL189W ADH6Q04894 360 aaKnown RBP2.07□□□□□ -2.08
SRP1YNL189W SDO1Q07953 250 aaKnown RBP2.07□□□□□ -2.08
SRP1YNL189W YPR011CQ12251 326 aa2.07□□□□□ -2.08
SRP1YNL189W GDH2P33327 1092 aaKnown RBP2.06□□□□□ -2.08
SRP1YNL189W JEN1P36035 616 aa2.06□□□□□ -2.08
SRP1YNL189W AGX1P43567 385 aa2.06□□□□□ -2.08
SRP1YNL189W AAH1P53909 347 aa2.06□□□□□ -2.08
SRP1YNL189W DPB2P24482 689 aaPredicted RBP2.06□□□□□ -2.08
SRP1YNL189W YHR045WP38775 560 aa2.06□□□□□ -2.08
SRP1YNL189W GON7P46984 123 aa2.06□□□□□ -2.08
SRP1YNL189W YJR146WP47174 117 aa2.06□□□□□ -2.08
SRP1YNL189W SLX9P53251 210 aaPredicted RBP2.06□□□□□ -2.08
SRP1YNL189W CAB4P53332 305 aa2.06□□□□□ -2.08
SRP1YNL189W BOP2Q06150 570 aa2.06□□□□□ -2.08
SRP1YNL189W GEP5Q12393 293 aa2.06□□□□□ -2.08
SRP1YNL189W POX1P13711 748 aa2.05□□□□□ -2.08
SRP1YNL189W PPH21P23594 369 aa2.05□□□□□ -2.08
SRP1YNL189W UTR5P32630 166 aa2.05□□□□□ -2.08
SRP1YNL189W PRS4P38063 326 aaPredicted RBP2.05□□□□□ -2.08
SRP1YNL189W YLR179CQ06252 201 aaKnown RBP2.05□□□□□ -2.08
SRP1YNL189W RAD3P06839 778 aa2.04□□□□□ -2.08
SRP1YNL189W BMH1P29311 267 aaKnown RBP2.04□□□□□ -2.08
SRP1YNL189W SFC1P33303 322 aa2.04□□□□□ -2.08
SRP1YNL189W SNZ3P43545 298 aa2.04□□□□□ -2.08
SRP1YNL189W BNA6P43619 295 aa2.04□□□□□ -2.08
SRP1YNL189W YMR114CQ04471 368 aaKnown RBP2.04□□□□□ -2.08
SRP1YNL189W RNH1Q04740 348 aa2.04□□□□□ -2.08
SRP1YNL189W COQ10Q08058 207 aa2.04□□□□□ -2.08
SRP1YNL189W TCP1P12612 559 aaKnown RBP2.03□□□□□ -2.08
SRP1YNL189W VPS3P23643 1011 aa2.03□□□□□ -2.08
SRP1YNL189W MAL32P38158 584 aa2.03□□□□□ -2.08
SRP1YNL189W MRX3P38172 270 aa2.03□□□□□ -2.08
SRP1YNL189W ECM13P38195 257 aa2.03□□□□□ -2.08
SRP1YNL189W MAL12P53341 584 aa2.03□□□□□ -2.08
SRP1YNL189W GRH1Q04410 372 aaKnown RBP2.03□□□□□ -2.08
SRP1YNL189W MSH5Q12175 901 aa2.03□□□□□ -2.08
SRP1YNL189W SWI1P09547 1314 aa2.03□□□□□ -2.08
SRP1YNL189W DPM1P14020 267 aaKnown RBP2.02□□□□□ -2.09
SRP1YNL189W HOM6P31116 359 aaKnown RBP2.02□□□□□ -2.09
SRP1YNL189W TEM1P38987 245 aa2.02□□□□□ -2.09
SRP1YNL189W ASI3P53983 676 aa2.02□□□□□ -2.09
SRP1YNL189W YDR209CQ03480 137 aa2.02□□□□□ -2.09
SRP1YNL189W YLR173WQ06247 608 aa2.02□□□□□ -2.09
SRP1YNL189W SMT3Q12306 101 aaKnown RBP2.02□□□□□ -2.09
SRP1YNL189W YBL008W-AQ3E821 79 aa2.02□□□□□ -2.09
SRP1YNL189W YJR141WP47172 347 aaPredicted RBP2.02□□□□□ -2.09
SRP1YNL189W SNZ2P53824 298 aa2.02□□□□□ -2.09
SRP1YNL189W RSM10Q03201 203 aa2.02□□□□□ -2.09
SRP1YNL189W TLG1Q03322 224 aa2.02□□□□□ -2.09
SRP1YNL189W TY3A-GQ12173 290 aa2.02□□□□□ -2.09
SRP1YNL189W PST1Q12355 444 aa2.02□□□□□ -2.09
SRP1YNL189W ATG31Q12421 196 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms