RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C SAS5Q99314 248 aa1.33□□□□□ -2.2
UBX4YMR067C ECM13P38195 257 aa1.32□□□□□ -2.2
UBX4YMR067C MNN9P39107 395 aaKnown RBP1.32□□□□□ -2.2
UBX4YMR067C YHB1P39676 399 aaKnown RBP1.32□□□□□ -2.2
UBX4YMR067C PEP8P40335 379 aa1.32□□□□□ -2.2
UBX4YMR067C BOP2Q06150 570 aa1.32□□□□□ -2.2
UBX4YMR067C BCP1Q06338 283 aa1.32□□□□□ -2.2
UBX4YMR067C CUR1Q06469 252 aa1.32□□□□□ -2.2
UBX4YMR067C AI5_BETAQ9ZZX0 354 aa1.32□□□□□ -2.2
UBX4YMR067C POX1P13711 748 aa1.31□□□□□ -2.2
UBX4YMR067C SHC1P39000 512 aa1.31□□□□□ -2.2
UBX4YMR067C PRM9P39551 298 aa1.31□□□□□ -2.2
UBX4YMR067C YER135CP40082 130 aa1.31□□□□□ -2.2
UBX4YMR067C PRM15Q03262 622 aa1.31□□□□□ -2.2
UBX4YMR067C ATC1Q04005 294 aa1.31□□□□□ -2.2
UBX4YMR067C MHT1Q12525 324 aa1.31□□□□□ -2.2
UBX4YMR067C SGA1P08019 549 aa1.3□□□□□ -2.2
UBX4YMR067C RPL4AP10664 362 aaKnown RBP1.3□□□□□ -2.2
UBX4YMR067C TRX1P22217 103 aaKnown RBP1.3□□□□□ -2.2
UBX4YMR067C SER33P40510 469 aa1.3□□□□□ -2.2
UBX4YMR067C RPL4BP49626 362 aaKnown RBP1.3□□□□□ -2.2
UBX4YMR067C PEX31P53203 462 aa1.3□□□□□ -2.2
UBX4YMR067C CPD1P53314 239 aa1.3□□□□□ -2.2
UBX4YMR067C AAH1P53909 347 aa1.3□□□□□ -2.2
UBX4YMR067C ABZ2Q03266 374 aa1.3□□□□□ -2.2
UBX4YMR067C SFH1Q06168 426 aa1.3□□□□□ -2.2
UBX4YMR067C UBR2Q07963 1872 aa1.3□□□□□ -2.2
UBX4YMR067C CWP1P28319 239 aa1.29□□□□□ -2.2
UBX4YMR067C OST2P46964 130 aa1.29□□□□□ -2.2
UBX4YMR067C TIM21P53220 239 aa1.29□□□□□ -2.2
UBX4YMR067C YNL260CP53846 198 aa1.29□□□□□ -2.2
UBX4YMR067C SPO19Q03029 223 aa1.29□□□□□ -2.2
UBX4YMR067C SLD7Q08457 257 aa1.29□□□□□ -2.2
UBX4YMR067C CDC7P06243 507 aa1.28□□□□□ -2.2
UBX4YMR067C FBA1P14540 359 aaKnown RBP1.28□□□□□ -2.2
UBX4YMR067C FRS2P15625 503 aaKnown RBP1.28□□□□□ -2.2
UBX4YMR067C CSM1P25651 190 aa1.28□□□□□ -2.2
UBX4YMR067C DOG1P38774 246 aa1.28□□□□□ -2.2
UBX4YMR067C RSM10Q03201 203 aa1.28□□□□□ -2.2
UBX4YMR067C VBA1Q04301 562 aa1.28□□□□□ -2.2
UBX4YMR067C EMI1Q04406 187 aa1.28□□□□□ -2.2
UBX4YMR067C RCY1P39531 840 aa1.27□□□□□ -2.21
UBX4YMR067C NBP35P52920 328 aa1.27□□□□□ -2.21
UBX4YMR067C SWS2P53937 143 aa1.27□□□□□ -2.21
UBX4YMR067C PER33Q12144 273 aa1.27□□□□□ -2.21
UBX4YMR067C RPC40P07703 335 aaKnown RBP1.26□□□□□ -2.21
UBX4YMR067C STH1P32597 1359 aa1.25□□□□□ -2.21
UBX4YMR067C PEX4P29340 183 aa1.25□□□□□ -2.21
UBX4YMR067C HEK2P38199 381 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21 RIP-Chip
UBX4YMR067C YHL049CP38722 271 aa1.25□□□□□ -2.21
UBX4YMR067C OSW5P40219 148 aa1.25□□□□□ -2.21
UBX4YMR067C CTF19Q02732 369 aa1.25□□□□□ -2.21
UBX4YMR067C ERV41Q04651 352 aa1.25□□□□□ -2.21
UBX4YMR067C INM2Q05533 292 aa1.25□□□□□ -2.21
UBX4YMR067C EMP46Q12396 444 aa1.25□□□□□ -2.21
UBX4YMR067C RPP0P05317 312 aaKnown RBP1.24□□□□□ -2.21
UBX4YMR067C YOL162WP0CF19 215 aa1.24□□□□□ -2.21
UBX4YMR067C UGA1P17649 471 aa1.24□□□□□ -2.21
UBX4YMR067C SCL1P21243 252 aaKnown RBP1.24□□□□□ -2.21
UBX4YMR067C POF1P25576 258 aa1.24□□□□□ -2.21
UBX4YMR067C ARC15P40518 154 aaRIP-Chip data1.24□□□□□ -2.21not detected
UBX4YMR067C MZM1Q03429 123 aaPredicted RBP1.24□□□□□ -2.21
UBX4YMR067C PEX10Q05568 337 aa1.24□□□□□ -2.21
UBX4YMR067C RAS2P01120 322 aaKnown RBP1.23□□□□□ -2.21
UBX4YMR067C PRS4P38063 326 aaPredicted RBP1.23□□□□□ -2.21
UBX4YMR067C COS8P38723 381 aa1.23□□□□□ -2.21
UBX4YMR067C CIS3P47001 227 aa1.23□□□□□ -2.21
UBX4YMR067C MNT4P53745 580 aa1.23□□□□□ -2.21
UBX4YMR067C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
UBX4YMR067C REX3Q12090 404 aa1.23□□□□□ -2.21
UBX4YMR067C SEC22P22214 214 aa1.22□□□□□ -2.21
UBX4YMR067C RCN1P36054 211 aa1.22□□□□□ -2.21
UBX4YMR067C VTC1P40046 129 aaRIP-Chip data1.22□□□□□ -2.21not detected
UBX4YMR067C GCD14P46959 383 aaPredicted RBP1.22□□□□□ -2.21
UBX4YMR067C MRX5P47007 382 aa1.22□□□□□ -2.21
UBX4YMR067C YGR026WP53217 278 aa1.22□□□□□ -2.21
UBX4YMR067C ARP5P53946 755 aa1.22□□□□□ -2.21
UBX4YMR067C YMR279CQ03263 540 aa1.22□□□□□ -2.21
UBX4YMR067C MDY2Q12285 212 aa1.22□□□□□ -2.21
UBX4YMR067C SME1Q12330 94 aaPredicted RBP1.22□□□□□ -2.21
UBX4YMR067C DCN1Q12395 269 aa1.22□□□□□ -2.21
UBX4YMR067C MON2P48563 1636 aaPredicted RBP1.22□□□□□ -2.21
UBX4YMR067C CYR1P08678 2026 aaKnown RBP1.22□□□□□ -2.21
UBX4YMR067C Q0255P03881 472 aa1.21□□□□□ -2.22
UBX4YMR067C DSF1P0CX08 502 aa1.21□□□□□ -2.22
UBX4YMR067C YNR073CP0CX09 502 aa1.21□□□□□ -2.22
UBX4YMR067C MDH2P22133 377 aa1.21□□□□□ -2.22
UBX4YMR067C YSR3P23501 404 aa1.21□□□□□ -2.22
UBX4YMR067C KRR1P25586 316 aaPredicted RBP1.21□□□□□ -2.22
UBX4YMR067C MDH3P32419 343 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
UBX4YMR067C HSM3P38348 480 aa1.21□□□□□ -2.22
UBX4YMR067C BMT5P40493 336 aa1.21□□□□□ -2.22
UBX4YMR067C SMD3P43321 101 aaKnown RBP1.21□□□□□ -2.22
UBX4YMR067C LSB1P53281 241 aa1.21□□□□□ -2.22
UBX4YMR067C MRPS8Q03799 155 aa1.21□□□□□ -2.22
UBX4YMR067C ARV1Q06541 321 aa1.21□□□□□ -2.22
UBX4YMR067C AKR2Q12013 749 aa1.21□□□□□ -2.22
UBX4YMR067C YKR045CP36138 183 aa1.2□□□□□ -2.22
UBX4YMR067C ERG25P53045 309 aa1.2□□□□□ -2.22
UBX4YMR067C PNC1P53184 216 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 72 ms