RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C GAL1P04385 528 aa9.96□□□□□ -0.81
SPT8YLR055C MRPL15P36523 253 aa9.96□□□□□ -0.81
SPT8YLR055C SMK1P41808 388 aa9.96□□□□□ -0.81
SPT8YLR055C NSE4P43124 402 aa9.96□□□□□ -0.81
SPT8YLR055C CIN2P46670 268 aa9.96□□□□□ -0.81
SPT8YLR055C FMP41P53889 259 aaKnown RBP9.96□□□□□ -0.81
SPT8YLR055C LUC7Q07508 261 aaPredicted RBP9.96□□□□□ -0.81
SPT8YLR055C CDC34P14682 295 aa9.96□□□□□ -0.82
SPT8YLR055C MDH3P32419 343 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
SPT8YLR055C YIL086CP40503 102 aa9.96□□□□□ -0.82
SPT8YLR055C SRB7P47822 140 aa9.96□□□□□ -0.82
SPT8YLR055C CTF19Q02732 369 aa9.96□□□□□ -0.82
SPT8YLR055C SNO1Q03144 224 aa9.96□□□□□ -0.82
SPT8YLR055C YPR091CQ06833 770 aa9.96□□□□□ -0.82
SPT8YLR055C FUR4P05316 633 aaKnown RBP9.95□□□□□ -0.82
SPT8YLR055C CHO1P08456 276 aa9.95□□□□□ -0.82
SPT8YLR055C SED4P25365 1065 aa9.95□□□□□ -0.82
SPT8YLR055C DBF20P32328 564 aa9.95□□□□□ -0.82
SPT8YLR055C GIP2P40036 548 aa9.95□□□□□ -0.82
SPT8YLR055C NAM2P11325 894 aa9.94□□□□□ -0.82
SPT8YLR055C STE4P18851 423 aa9.94□□□□□ -0.82
SPT8YLR055C YPK2P18961 677 aa9.94□□□□□ -0.82
SPT8YLR055C NFS1P25374 497 aa9.94□□□□□ -0.82
SPT8YLR055C VBA2P38358 474 aaKnown RBP9.94□□□□□ -0.82
SPT8YLR055C RPP1P38786 293 aa9.94□□□□□ -0.82
SPT8YLR055C CHS7P38843 316 aa9.94□□□□□ -0.82
SPT8YLR055C SKN7P38889 622 aa9.94□□□□□ -0.82
SPT8YLR055C PRP39P39682 629 aaKnown RBP9.94□□□□□ -0.82
SPT8YLR055C CCC1P47818 322 aa9.94□□□□□ -0.82
SPT8YLR055C OGG1P53397 376 aaPredicted RBP9.94□□□□□ -0.82
SPT8YLR055C CRR1Q05790 422 aa9.94□□□□□ -0.82
SPT8YLR055C YPR172WQ06608 200 aa9.94□□□□□ -0.82
SPT8YLR055C SCP1Q08873 200 aa9.94□□□□□ -0.82
SPT8YLR055C CYR1P08678 2026 aaKnown RBP9.94□□□□□ -0.82
SPT8YLR055C IRA1P18963 3092 aa9.94□□□□□ -0.82
SPT8YLR055C RPS31P05759 152 aaKnown RBP9.93□□□□□ -0.82
SPT8YLR055C UBI4P0CG63 381 aaKnown RBP9.93□□□□□ -0.82
SPT8YLR055C SIP1P32578 815 aa9.93□□□□□ -0.82
SPT8YLR055C PTR2P32901 601 aa9.93□□□□□ -0.82
SPT8YLR055C MRPL27P36526 146 aaPredicted RBP9.93□□□□□ -0.82
SPT8YLR055C SHM2P37291 469 aaKnown RBP9.93□□□□□ -0.82
SPT8YLR055C CDS1P38221 457 aa9.93□□□□□ -0.82
SPT8YLR055C ANS1P38832 159 aa9.93□□□□□ -0.82
SPT8YLR055C POG1P40473 351 aa9.93□□□□□ -0.82
SPT8YLR055C EMC5P40540 141 aa9.93□□□□□ -0.82
SPT8YLR055C LRS4Q04087 347 aaKnown RBP9.93□□□□□ -0.82
SPT8YLR055C ORT1Q12375 292 aa9.93□□□□□ -0.82
SPT8YLR055C GPI14P47088 403 aaKnown RBP9.93□□□□□ -0.82
SPT8YLR055C SSN8P47821 323 aa9.93□□□□□ -0.82
SPT8YLR055C PNC1P53184 216 aaKnown RBP9.93□□□□□ -0.82
SPT8YLR055C PEX25Q02969 394 aa9.93□□□□□ -0.82
SPT8YLR055C BER1Q06688 274 aaKnown RBP9.93□□□□□ -0.82
SPT8YLR055C SDO1Q07953 250 aaKnown RBP9.93□□□□□ -0.82
SPT8YLR055C YOL073CQ08232 322 aa9.93□□□□□ -0.82
SPT8YLR055C TPI1P00942 248 aaKnown RBP9.92□□□□□ -0.82
SPT8YLR055C PPZ2P33329 710 aa9.92□□□□□ -0.82
SPT8YLR055C APD1P38281 316 aa9.92□□□□□ -0.82
SPT8YLR055C YPC1P38298 316 aa9.92□□□□□ -0.82
SPT8YLR055C TRR2P38816 342 aa9.92□□□□□ -0.82
SPT8YLR055C LNP1P38878 278 aa9.92□□□□□ -0.82
SPT8YLR055C TIF11P38912 153 aaKnown RBP9.92□□□□□ -0.82
SPT8YLR055C VPS52P39904 641 aa9.92□□□□□ -0.82
SPT8YLR055C AVT7P40501 490 aa9.92□□□□□ -0.82
SPT8YLR055C YIR035CP40579 254 aa9.92□□□□□ -0.82
SPT8YLR055C TPC1P53257 314 aa9.92□□□□□ -0.82
SPT8YLR055C TEL1P38110 2787 aa9.92□□□□□ -0.82
SPT8YLR055C MXR2P25566 168 aa9.91□□□□□ -0.82
SPT8YLR055C MSK1P32048 576 aa9.91□□□□□ -0.82
SPT8YLR055C RPS27AP35997 82 aaKnown RBP9.91□□□□□ -0.82
SPT8YLR055C YKL071WP36086 256 aa9.91□□□□□ -0.82
SPT8YLR055C RPS27BP38711 82 aa9.91□□□□□ -0.82
SPT8YLR055C QRI1P43123 477 aaKnown RBP9.91□□□□□ -0.82
SPT8YLR055C MRPL22P53881 309 aa9.91□□□□□ -0.82
SPT8YLR055C ERG13P54839 491 aaKnown RBP9.91□□□□□ -0.82
SPT8YLR055C HDA2Q06629 674 aa9.91□□□□□ -0.82
SPT8YLR055C URA6P15700 204 aa9.91□□□□□ -0.82
SPT8YLR055C ATG8P38182 117 aaRIP-Chip data9.91□□□□□ -0.82not detected
SPT8YLR055C YHR210CP38893 341 aa9.91□□□□□ -0.82
SPT8YLR055C YGR012WP53206 393 aa9.91□□□□□ -0.82
SPT8YLR055C ACT1P60010 375 aaKnown RBP9.91□□□□□ -0.82
SPT8YLR055C FCF2Q12035 217 aaPredicted RBP9.91□□□□□ -0.82
SPT8YLR055C YPR145C-AQ2V2P0 78 aa9.91□□□□□ -0.82
SPT8YLR055C YFR010W-AP0C5N0 62 aa9.9□□□□□ -0.82
SPT8YLR055C CPR2P23285 205 aa9.9□□□□□ -0.82
SPT8YLR055C SPT10P35208 640 aa9.9□□□□□ -0.82
SPT8YLR055C IMD2P38697 523 aaKnown RBP9.9□□□□□ -0.82
SPT8YLR055C AGX1P43567 385 aa9.9□□□□□ -0.82
SPT8YLR055C NIF3P53081 288 aa9.9□□□□□ -0.82
SPT8YLR055C YIP4P53093 235 aa9.9□□□□□ -0.82
SPT8YLR055C RNH70P53331 553 aa9.9□□□□□ -0.82
SPT8YLR055C APM1Q00776 475 aaPredicted RBP9.9□□□□□ -0.82
SPT8YLR055C EST3Q03096 181 aa9.9□□□□□ -0.82
SPT8YLR055C RRT7Q07829 113 aa9.9□□□□□ -0.82
SPT8YLR055C HRT1Q08273 121 aa9.9□□□□□ -0.82
SPT8YLR055C MATALPHA1P0CY06 175 aa9.89□□□□□ -0.83
SPT8YLR055C HMLALPHA1P0CY07 175 aa9.89□□□□□ -0.83
SPT8YLR055C FRS1P15624 595 aaKnown RBP9.89□□□□□ -0.83
SPT8YLR055C HNM1P19807 563 aa9.89□□□□□ -0.83
SPT8YLR055C FMT1P32785 401 aa9.89□□□□□ -0.83
SPT8YLR055C COS9P36034 407 aa9.89□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms