RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C ECM19Q06011 112 aa1.13□□□□□ -2.23
RPL40BYKR094C YPR098CQ06089 161 aa1.13□□□□□ -2.23
RPL40BYKR094C YPR147CQ06522 304 aaKnown RBP1.13□□□□□ -2.23
RPL40BYKR094C YDL144CQ07589 356 aa1.13□□□□□ -2.23
RPL40BYKR094C SGT2Q12118 346 aaKnown RBP1.13□□□□□ -2.23
RPL40BYKR094C IES3Q12345 250 aa1.13□□□□□ -2.23
RPL40BYKR094C ATG31Q12421 196 aa1.13□□□□□ -2.23
RPL40BYKR094C SNF8Q12483 233 aa1.13□□□□□ -2.23
RPL40BYKR094C AI5_BETAQ9ZZX0 354 aa1.13□□□□□ -2.23
RPL40BYKR094C YAK1P14680 807 aa1.12□□□□□ -2.23
RPL40BYKR094C CUP2P15315 225 aa1.12□□□□□ -2.23
RPL40BYKR094C RPB4P20433 221 aaPredicted RBP1.12□□□□□ -2.23
RPL40BYKR094C COX10P21592 462 aa1.12□□□□□ -2.23
RPL40BYKR094C YCR025CP25352 136 aa1.12□□□□□ -2.23
RPL40BYKR094C JEN1P36035 616 aa1.12□□□□□ -2.23
RPL40BYKR094C MRX3P38172 270 aa1.12□□□□□ -2.23
RPL40BYKR094C TRR2P38816 342 aa1.12□□□□□ -2.23
RPL40BYKR094C DSN1P40568 576 aa1.12□□□□□ -2.23
RPL40BYKR094C ECO1P43605 281 aa1.12□□□□□ -2.23
RPL40BYKR094C HSH155P49955 971 aaKnown RBP1.12□□□□□ -2.23
RPL40BYKR094C NIF3P53081 288 aa1.12□□□□□ -2.23
RPL40BYKR094C SMD1Q02260 146 aaPredicted RBP1.12□□□□□ -2.23
RPL40BYKR094C BNA7Q04066 261 aa1.12□□□□□ -2.23
RPL40BYKR094C GTO3Q04806 366 aa1.12□□□□□ -2.23
RPL40BYKR094C YLR283WQ05867 314 aa1.12□□□□□ -2.23
RPL40BYKR094C DXO1Q06349 442 aa1.12□□□□□ -2.23
RPL40BYKR094C CSM4Q08955 156 aa1.12□□□□□ -2.23
RPL40BYKR094C YCT1Q12235 531 aa1.12□□□□□ -2.23
RPL40BYKR094C TDH2P00358 332 aaKnown RBP1.11□□□□□ -2.23
RPL40BYKR094C RPP0P05317 312 aaKnown RBP1.11□□□□□ -2.23
RPL40BYKR094C MATALPHA1P0CY06 175 aa1.11□□□□□ -2.23
RPL40BYKR094C HMLALPHA1P0CY07 175 aa1.11□□□□□ -2.23
RPL40BYKR094C NHP6BP11633 99 aaKnown RBP1.11□□□□□ -2.23
RPL40BYKR094C ATG15P25641 520 aa1.11□□□□□ -2.23
RPL40BYKR094C RPB9P27999 122 aa1.11□□□□□ -2.23
RPL40BYKR094C BMH1P29311 267 aaKnown RBP1.11□□□□□ -2.23
RPL40BYKR094C HOM6P31116 359 aaKnown RBP1.11□□□□□ -2.23
RPL40BYKR094C SSO1P32867 290 aa1.11□□□□□ -2.23
RPL40BYKR094C MAL32P38158 584 aa1.11□□□□□ -2.23
RPL40BYKR094C YMR144WP40214 342 aaKnown RBP1.11□□□□□ -2.23
RPL40BYKR094C SER33P40510 469 aa1.11□□□□□ -2.23
RPL40BYKR094C YIL059CP40520 121 aa1.11□□□□□ -2.23
RPL40BYKR094C SYS1P41544 203 aa1.11□□□□□ -2.23
RPL40BYKR094C BUD13P46947 266 aaPredicted RBP1.11□□□□□ -2.23
RPL40BYKR094C NBP35P52920 328 aa1.11□□□□□ -2.23
RPL40BYKR094C MAL12P53341 584 aa1.11□□□□□ -2.23
RPL40BYKR094C FMP41P53889 259 aaKnown RBP1.11□□□□□ -2.23
RPL40BYKR094C PGA2P53903 129 aa1.11□□□□□ -2.23
RPL40BYKR094C AAH1P53909 347 aa1.11□□□□□ -2.23
RPL40BYKR094C CDC14Q00684 551 aa1.11□□□□□ -2.23
RPL40BYKR094C SDC1Q03323 175 aa1.11□□□□□ -2.23
RPL40BYKR094C GOT1Q03554 138 aa1.11□□□□□ -2.23
RPL40BYKR094C TVP15Q03860 143 aa1.11□□□□□ -2.23
RPL40BYKR094C YDR114CQ04597 100 aa1.11□□□□□ -2.23
RPL40BYKR094C YDR124WQ04608 324 aa1.11□□□□□ -2.23
RPL40BYKR094C DIB1Q06819 143 aaPredicted RBP1.11□□□□□ -2.23
RPL40BYKR094C PLB3Q08108 686 aa1.11□□□□□ -2.23
RPL40BYKR094C RRP40Q08285 240 aaKnown RBP1.11□□□□□ -2.23
RPL40BYKR094C YPR063CQ12160 140 aa1.11□□□□□ -2.23
RPL40BYKR094C PST1Q12355 444 aa1.11□□□□□ -2.23
RPL40BYKR094C YAL063C-AQ3E791 96 aa1.11□□□□□ -2.23
RPL40BYKR094C YBL008W-AQ3E821 79 aa1.11□□□□□ -2.23
RPL40BYKR094C ISD11Q6Q560 94 aa1.11□□□□□ -2.23
RPL40BYKR094C DRS2P39524 1355 aa1.1□□□□□ -2.23
RPL40BYKR094C THP2O13539 261 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C YKR104WP0CE69 306 aa1.1□□□□□ -2.23
RPL40BYKR094C YOL163WP0CF20 169 aa1.1□□□□□ -2.23
RPL40BYKR094C TCP1P12612 559 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C STE18P18852 110 aa1.1□□□□□ -2.23
RPL40BYKR094C COQ1P18900 473 aa1.1□□□□□ -2.23
RPL40BYKR094C VMA6P32366 345 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C DOA4P32571 926 aa1.1□□□□□ -2.23
RPL40BYKR094C CSG2P35206 410 aa1.1□□□□□ -2.23
RPL40BYKR094C YKT6P36015 200 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C DRE2P36152 348 aa1.1□□□□□ -2.23
RPL40BYKR094C HMT1P38074 348 aa1.1□□□□□ -2.23
RPL40BYKR094C YHL049CP38722 271 aa1.1□□□□□ -2.23
RPL40BYKR094C ARN2P38724 620 aa1.1□□□□□ -2.23
RPL40BYKR094C YHL044WP38727 235 aa1.1□□□□□ -2.23
RPL40BYKR094C YHR127WP38833 243 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C SPL2P38839 148 aa1.1□□□□□ -2.23
RPL40BYKR094C YHB1P39676 399 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C SMB1P40018 196 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C PRE6P40303 254 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C MSS2P40990 351 aa1.1□□□□□ -2.23
RPL40BYKR094C COS4P43542 379 aa1.1□□□□□ -2.23
RPL40BYKR094C SNZ3P43545 298 aa1.1□□□□□ -2.23
RPL40BYKR094C OTU1P43558 301 aa1.1□□□□□ -2.23
RPL40BYKR094C HOC1P47124 396 aa1.1□□□□□ -2.23
RPL40BYKR094C YJR079WP47126 109 aa1.1□□□□□ -2.23
RPL40BYKR094C UFD1P53044 361 aa1.1□□□□□ -2.23
RPL40BYKR094C NSA1P53136 463 aaPredicted RBP1.1□□□□□ -2.23
RPL40BYKR094C SNZ2P53824 298 aa1.1□□□□□ -2.23
RPL40BYKR094C ALG9P53868 555 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C NOP13P53883 403 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
RPL40BYKR094C SWS2P53937 143 aa1.1□□□□□ -2.23
RPL40BYKR094C ACT1P60010 375 aaKnown RBP1.1□□□□□ -2.23
RPL40BYKR094C SPG4Q04438 115 aa1.1□□□□□ -2.23
RPL40BYKR094C HEM25Q07534 307 aa1.1□□□□□ -2.23
RPL40BYKR094C SEY1Q99287 776 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms