RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C CAT2P32796 670 aaKnown RBP1.18□□□□□ -2.22
VPS55YJR044C ARC19P33204 171 aaKnown RBP1.18□□□□□ -2.22
VPS55YJR044C GDH2P33327 1092 aaKnown RBP1.18□□□□□ -2.22
VPS55YJR044C VPS51P36116 164 aa1.18□□□□□ -2.22
VPS55YJR044C ECM4P36156 370 aa1.18□□□□□ -2.22
VPS55YJR044C MRPL3P36516 390 aa1.18□□□□□ -2.22
VPS55YJR044C GPI18P38211 433 aa1.18□□□□□ -2.22
VPS55YJR044C MED8P38304 223 aa1.18□□□□□ -2.22
VPS55YJR044C ECM34P38728 170 aa1.18□□□□□ -2.22
VPS55YJR044C CHL4P38907 458 aa1.18□□□□□ -2.22
VPS55YJR044C GGC1P38988 300 aa1.18□□□□□ -2.22
VPS55YJR044C MIG3P39943 394 aa1.18□□□□□ -2.22
VPS55YJR044C SMB1P40018 196 aaKnown RBP1.18□□□□□ -2.22
VPS55YJR044C RPE1P46969 238 aa1.18□□□□□ -2.22
VPS55YJR044C YJR054WP47114 497 aa1.18□□□□□ -2.22
VPS55YJR044C JHD2P47156 728 aaPredicted RBP1.18□□□□□ -2.22
VPS55YJR044C BNS1P50084 137 aa1.18□□□□□ -2.22
VPS55YJR044C CWC23P52868 283 aaPredicted RBP1.18□□□□□ -2.22
VPS55YJR044C TPN1P53099 579 aa1.18□□□□□ -2.22
VPS55YJR044C YGL118CP53132 145 aa1.18□□□□□ -2.22
VPS55YJR044C SDS23P53172 527 aa1.18□□□□□ -2.22
VPS55YJR044C YGR015CP53208 328 aa1.18□□□□□ -2.22
VPS55YJR044C GTR2P53290 341 aa1.18□□□□□ -2.22
VPS55YJR044C FYV6P53913 173 aa1.18□□□□□ -2.22
VPS55YJR044C TPS1Q00764 495 aaKnown RBP1.18□□□□□ -2.22
VPS55YJR044C GOT1Q03554 138 aa1.18□□□□□ -2.22
VPS55YJR044C FAR10Q06001 478 aa1.18□□□□□ -2.22
VPS55YJR044C MCT1Q12283 360 aa1.18□□□□□ -2.22
VPS55YJR044C YEL009C-AA0A023PZF2 135 aa1.17□□□□□ -2.22
VPS55YJR044C SAL1D6W196 494 aa1.17□□□□□ -2.22
VPS55YJR044C YKR104WP0CE69 306 aa1.17□□□□□ -2.22
VPS55YJR044C YCR102CP25608 368 aa1.17□□□□□ -2.22
VPS55YJR044C RPS5P26783 225 aaKnown RBP1.17□□□□□ -2.22
VPS55YJR044C ATP7P30902 174 aa1.17□□□□□ -2.22
VPS55YJR044C VPH2P32341 215 aa1.17□□□□□ -2.22
VPS55YJR044C YKL187CP34231 750 aa1.17□□□□□ -2.22
VPS55YJR044C PRY2P36110 329 aa1.17□□□□□ -2.22
VPS55YJR044C CAF4P36130 643 aa1.17□□□□□ -2.22
VPS55YJR044C FRM2P37261 193 aa1.17□□□□□ -2.22
VPS55YJR044C RCK1P38622 512 aa1.17□□□□□ -2.22
VPS55YJR044C RTC3P38804 111 aaPredicted RBP1.17□□□□□ -2.22
VPS55YJR044C IKI1P38874 309 aa1.17□□□□□ -2.22
VPS55YJR044C BAT1P38891 393 aaKnown RBP1.17□□□□□ -2.22
VPS55YJR044C PTI1P39927 425 aaPredicted RBP1.17□□□□□ -2.22
VPS55YJR044C YER184CP39961 794 aa1.17□□□□□ -2.22
VPS55YJR044C VAB2P40003 282 aa1.17□□□□□ -2.22
VPS55YJR044C EDC2P40023 145 aaPredicted RBP1.17□□□□□ -2.22
VPS55YJR044C AVT7P40501 490 aa1.17□□□□□ -2.22
VPS55YJR044C YFL064CP43540 174 aa1.17□□□□□ -2.22
VPS55YJR044C SNZ3P43545 298 aa1.17□□□□□ -2.22
VPS55YJR044C GLG2P47011 380 aa1.17□□□□□ -2.22
VPS55YJR044C HAM1P47119 197 aaKnown RBP1.17□□□□□ -2.22
VPS55YJR044C ILM1P47155 203 aa1.17□□□□□ -2.22
VPS55YJR044C IBA57P47158 497 aa1.17□□□□□ -2.22
VPS55YJR044C NUP57P48837 541 aa1.17□□□□□ -2.22
VPS55YJR044C TRM9P49957 279 aa1.17□□□□□ -2.22
VPS55YJR044C RMR1P53060 241 aa1.17□□□□□ -2.22
VPS55YJR044C EFM5P53200 248 aaKnown RBP1.17□□□□□ -2.22
VPS55YJR044C TPC1P53257 314 aa1.17□□□□□ -2.22
VPS55YJR044C SNZ2P53824 298 aa1.17□□□□□ -2.22
VPS55YJR044C SWT21P53873 357 aaPredicted RBP1.17□□□□□ -2.22
VPS55YJR044C CDC14Q00684 551 aa1.17□□□□□ -2.22
VPS55YJR044C YPL113CQ02961 396 aa1.17□□□□□ -2.22
VPS55YJR044C SNZ1Q03148 297 aa1.17□□□□□ -2.22
VPS55YJR044C API2Q04413 109 aa1.17□□□□□ -2.22
VPS55YJR044C SPG4Q04438 115 aa1.17□□□□□ -2.22
VPS55YJR044C YDR124WQ04608 324 aa1.17□□□□□ -2.22
VPS55YJR044C INM2Q05533 292 aa1.17□□□□□ -2.22
VPS55YJR044C DIB1Q06819 143 aaPredicted RBP1.17□□□□□ -2.22
VPS55YJR044C YOL029CQ08187 201 aa1.17□□□□□ -2.22
VPS55YJR044C ABP140Q08641 628 aaKnown RBP1.17□□□□□ -2.22
VPS55YJR044C MDM32Q12171 622 aa1.17□□□□□ -2.22
VPS55YJR044C RFM1Q12192 310 aa1.17□□□□□ -2.22
VPS55YJR044C WTM1Q12363 437 aaKnown RBP1.17□□□□□ -2.22
VPS55YJR044C DCN1Q12395 269 aa1.17□□□□□ -2.22
VPS55YJR044C YKL183C-AQ3E765 70 aa1.17□□□□□ -2.22
VPS55YJR044C YBL008W-AQ3E821 79 aa1.17□□□□□ -2.22
VPS55YJR044C FLO11P08640 1367 aa1.17□□□□□ -2.22
VPS55YJR044C NUP157P40064 1391 aaKnown RBP1.17□□□□□ -2.22
VPS55YJR044C QCR6P00127 147 aa1.16□□□□□ -2.22
VPS55YJR044C IPP1P00817 287 aaKnown RBP1.16□□□□□ -2.22
VPS55YJR044C ZWF1P11412 505 aaKnown RBP1.16□□□□□ -2.22
VPS55YJR044C URA6P15700 204 aa1.16□□□□□ -2.22
VPS55YJR044C SNF6P18888 332 aa1.16□□□□□ -2.22
VPS55YJR044C APA2P22108 325 aa1.16□□□□□ -2.22
VPS55YJR044C RME1P32338 300 aaKnown RBP1.16□□□□□ -2.22
VPS55YJR044C ERG2P32352 222 aa1.16□□□□□ -2.22
VPS55YJR044C GPX1P36014 167 aa1.16□□□□□ -2.22
VPS55YJR044C SHE1P38200 338 aa1.16□□□□□ -2.22
VPS55YJR044C POP8P38208 133 aa1.16□□□□□ -2.22
VPS55YJR044C YBR062CP38239 180 aa1.16□□□□□ -2.22
VPS55YJR044C SHE3P38272 425 aaKnown RBP1.16□□□□□ -2.22
VPS55YJR044C OM14P38325 134 aa1.16□□□□□ -2.22
VPS55YJR044C SPL2P38839 148 aa1.16□□□□□ -2.22
VPS55YJR044C EGD2P38879 174 aaKnown RBP1.16□□□□□ -2.22
VPS55YJR044C AVT6P40074 448 aa1.16□□□□□ -2.22
VPS55YJR044C UTP18P40362 594 aaPredicted RBP1.16□□□□□ -2.22
VPS55YJR044C SER33P40510 469 aa1.16□□□□□ -2.22
VPS55YJR044C MIC26P50087 233 aa1.16□□□□□ -2.22
VPS55YJR044C YGL262WP53054 175 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms