RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W QRI5P32344 111 aa1.64□□□□□ -2.15
RPL40AYIL148W SGE1P33335 543 aa1.64□□□□□ -2.15
RPL40AYIL148W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
RPL40AYIL148W CAB3P36076 571 aa1.64□□□□□ -2.15
RPL40AYIL148W PRY2P36110 329 aa1.64□□□□□ -2.15
RPL40AYIL148W HMT1P38074 348 aa1.64□□□□□ -2.15
RPL40AYIL148W MAL32P38158 584 aa1.64□□□□□ -2.15
RPL40AYIL148W YBL081WP38180 368 aaKnown RBP1.64□□□□□ -2.15
RPL40AYIL148W TCD1P38756 429 aa1.64□□□□□ -2.15
RPL40AYIL148W SUR2P38992 349 aa1.64□□□□□ -2.15
RPL40AYIL148W DSN1P40568 576 aa1.64□□□□□ -2.15
RPL40AYIL148W NUP84P52891 726 aa1.64□□□□□ -2.15
RPL40AYIL148W MAL12P53341 584 aa1.64□□□□□ -2.15
RPL40AYIL148W YNL095CP53932 642 aa1.64□□□□□ -2.15
RPL40AYIL148W RHO3Q00245 231 aaKnown RBP1.64□□□□□ -2.15
RPL40AYIL148W YDR222WQ04925 415 aa1.64□□□□□ -2.15
RPL40AYIL148W YPR098CQ06089 161 aa1.64□□□□□ -2.15
RPL40AYIL148W YPR147CQ06522 304 aaKnown RBP1.64□□□□□ -2.15
RPL40AYIL148W SDO1Q07953 250 aaKnown RBP1.64□□□□□ -2.15
RPL40AYIL148W YOL019WQ08157 551 aa1.64□□□□□ -2.15
RPL40AYIL148W YPS3Q12303 508 aa1.64□□□□□ -2.15
RPL40AYIL148W ATG5Q12380 294 aa1.64□□□□□ -2.15
RPL40AYIL148W RPP0P05317 312 aaKnown RBP1.63□□□□□ -2.15
RPL40AYIL148W SFC1P33303 322 aa1.63□□□□□ -2.15
RPL40AYIL148W MSN4P33749 630 aa1.63□□□□□ -2.15
RPL40AYIL148W JEN1P36035 616 aa1.63□□□□□ -2.15
RPL40AYIL148W ARN2P38724 620 aa1.63□□□□□ -2.15
RPL40AYIL148W TEM1P38987 245 aa1.63□□□□□ -2.15
RPL40AYIL148W CPR7P47103 393 aa1.63□□□□□ -2.15
RPL40AYIL148W HSH155P49955 971 aaKnown RBP1.63□□□□□ -2.15
RPL40AYIL148W NBP1P52919 319 aaPredicted RBP1.63□□□□□ -2.15
RPL40AYIL148W NBP35P52920 328 aa1.63□□□□□ -2.15
RPL40AYIL148W AAH1P53909 347 aa1.63□□□□□ -2.15
RPL40AYIL148W SWS2P53937 143 aa1.63□□□□□ -2.15
RPL40AYIL148W CDC14Q00684 551 aa1.63□□□□□ -2.15
RPL40AYIL148W KRE28Q04431 385 aa1.63□□□□□ -2.15
RPL40AYIL148W GTO3Q04806 366 aa1.63□□□□□ -2.15
RPL40AYIL148W YOR029WQ12243 111 aa1.63□□□□□ -2.15
RPL40AYIL148W SNF8Q12483 233 aa1.63□□□□□ -2.15
RPL40AYIL148W YBL008W-AQ3E821 79 aa1.63□□□□□ -2.15
RPL40AYIL148W RNP1P32385 249 aa1.62□□□□□ -2.15
RPL40AYIL148W YKR032WP36127 104 aa1.62□□□□□ -2.15
RPL40AYIL148W MRX3P38172 270 aa1.62□□□□□ -2.15
RPL40AYIL148W YHL049CP38722 271 aa1.62□□□□□ -2.15
RPL40AYIL148W THO1P40040 218 aaKnown RBP1.62□□□□□ -2.15
RPL40AYIL148W YGL088WP53151 121 aa1.62□□□□□ -2.15
RPL40AYIL148W YPL039WQ03080 316 aa1.62□□□□□ -2.15
RPL40AYIL148W GOT1Q03554 138 aa1.62□□□□□ -2.15
RPL40AYIL148W YDR124WQ04608 324 aa1.62□□□□□ -2.15
RPL40AYIL148W BOP2Q06150 570 aa1.62□□□□□ -2.15
RPL40AYIL148W PLB3Q08108 686 aa1.62□□□□□ -2.15
RPL40AYIL148W CSM4Q08955 156 aa1.62□□□□□ -2.15
RPL40AYIL148W MSH5Q12175 901 aa1.62□□□□□ -2.15
RPL40AYIL148W RFM1Q12192 310 aa1.62□□□□□ -2.15
RPL40AYIL148W SMT3Q12306 101 aaKnown RBP1.62□□□□□ -2.15
RPL40AYIL148W MET2P08465 486 aa1.61□□□□□ -2.15
RPL40AYIL148W YKR104WP0CE69 306 aa1.61□□□□□ -2.15
RPL40AYIL148W ZWF1P11412 505 aaKnown RBP1.61□□□□□ -2.15
RPL40AYIL148W DPB2P24482 689 aaPredicted RBP1.61□□□□□ -2.15
RPL40AYIL148W RSA4P25382 515 aaKnown RBP1.61□□□□□ -2.15
RPL40AYIL148W IME2P32581 645 aa1.61□□□□□ -2.15
RPL40AYIL148W AGA2P32781 87 aa1.61□□□□□ -2.15
RPL40AYIL148W SMB1P40018 196 aaKnown RBP1.61□□□□□ -2.15
RPL40AYIL148W AGX1P43567 385 aa1.61□□□□□ -2.15
RPL40AYIL148W YJR141WP47172 347 aaPredicted RBP1.61□□□□□ -2.15
RPL40AYIL148W SYF2P53277 215 aaPredicted RBP1.61□□□□□ -2.15
RPL40AYIL148W SRL4Q03085 281 aa1.61□□□□□ -2.15
RPL40AYIL148W RRP40Q08285 240 aaKnown RBP1.61□□□□□ -2.15
RPL40AYIL148W TY3A-GQ12173 290 aa1.61□□□□□ -2.15
RPL40AYIL148W YCT1Q12235 531 aa1.61□□□□□ -2.15
RPL40AYIL148W ATG31Q12421 196 aa1.61□□□□□ -2.15
RPL40AYIL148W TY3A-IQ99219 290 aa1.61□□□□□ -2.15
RPL40AYIL148W CFT1Q06632 1357 aaKnown RBP1.6□□□□□ -2.15
RPL40AYIL148W MRPL25P23369 157 aa1.6□□□□□ -2.15
RPL40AYIL148W HOM6P31116 359 aaKnown RBP1.6□□□□□ -2.15
RPL40AYIL148W RPT5P33297 434 aaKnown RBP1.6□□□□□ -2.15
RPL40AYIL148W CUE1P38428 203 aa1.6□□□□□ -2.15
RPL40AYIL148W YGP1P38616 354 aaKnown RBP1.6□□□□□ -2.15
RPL40AYIL148W YHB1P39676 399 aaKnown RBP1.6□□□□□ -2.15
RPL40AYIL148W YJL144WP47009 104 aa1.6□□□□□ -2.15
RPL40AYIL148W YJL028WP47062 111 aa1.6□□□□□ -2.15
RPL40AYIL148W YMR166CQ03829 368 aa1.6□□□□□ -2.15
RPL40AYIL148W SPG4Q04438 115 aa1.6□□□□□ -2.15
RPL40AYIL148W RUD3Q12234 484 aaKnown RBP1.6□□□□□ -2.15
RPL40AYIL148W HIS3P06633 220 aa1.59□□□□□ -2.15
RPL40AYIL148W MIG1P27705 504 aa1.59□□□□□ -2.15
RPL40AYIL148W BMH2P34730 273 aaKnown RBP1.59□□□□□ -2.15
RPL40AYIL148W DRE2P36152 348 aa1.59□□□□□ -2.15
RPL40AYIL148W YHR127WP38833 243 aaKnown RBP1.59□□□□□ -2.15
RPL40AYIL148W BFR1P38934 470 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
RPL40AYIL148W COX15P40086 486 aa1.59□□□□□ -2.15
RPL40AYIL148W YMR144WP40214 342 aaKnown RBP1.59□□□□□ -2.15
RPL40AYIL148W SNZ3P43545 298 aa1.59□□□□□ -2.15
RPL40AYIL148W LOA1Q06508 300 aa1.59□□□□□ -2.15
RPL40AYIL148W SYC1Q08553 188 aaPredicted RBP1.59□□□□□ -2.15
RPL40AYIL148W YPR011CQ12251 326 aa1.59□□□□□ -2.15
RPL40AYIL148W RAD10P06838 210 aa1.58□□□□□ -2.16
RPL40AYIL148W RPL24BP24000 155 aaKnown RBP1.58□□□□□ -2.16
RPL40AYIL148W PPA2P28239 310 aa1.58□□□□□ -2.16
RPL40AYIL148W LDB7P38210 180 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms