RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C YOR343CQ12484 108 aa3.24□□□□□ -1.89
OTU1YFL044C RPL6BP05739 176 aaKnown RBP3.23□□□□□ -1.89
OTU1YFL044C YOL163WP0CF20 169 aa3.23□□□□□ -1.89
OTU1YFL044C RPL35AP0CX84 120 aaKnown RBP3.23□□□□□ -1.89
OTU1YFL044C RPL35BP0CX85 120 aaKnown RBP3.23□□□□□ -1.89
OTU1YFL044C RPB8P20436 146 aa3.23□□□□□ -1.89
OTU1YFL044C CCA1P21269 546 aa3.23□□□□□ -1.89
OTU1YFL044C CNA1P23287 553 aa3.23□□□□□ -1.89
OTU1YFL044C HSP30P25619 332 aa3.23□□□□□ -1.89
OTU1YFL044C CAM1P29547 415 aaKnown RBP3.23□□□□□ -1.89
OTU1YFL044C TIM12P32830 109 aa3.23□□□□□ -1.89
OTU1YFL044C PEX18P38855 283 aa3.23□□□□□ -1.89
OTU1YFL044C MLH1P38920 769 aa3.23□□□□□ -1.89
OTU1YFL044C ALP1P38971 573 aa3.23□□□□□ -1.89
OTU1YFL044C RCY1P39531 840 aa3.23□□□□□ -1.89
OTU1YFL044C YER188WP40103 239 aa3.23□□□□□ -1.89
OTU1YFL044C YIL024CP40543 189 aa3.23□□□□□ -1.89
OTU1YFL044C YIR020CP40575 100 aa3.23□□□□□ -1.89
OTU1YFL044C NUP57P48837 541 aa3.23□□□□□ -1.89
OTU1YFL044C YGL235WP53071 178 aa3.23□□□□□ -1.89
OTU1YFL044C RMD9P53140 646 aaKnown RBP3.23□□□□□ -1.89
OTU1YFL044C MPC1P53157 130 aaKnown RBP3.23□□□□□ -1.89
OTU1YFL044C CRZ1P53968 678 aa3.23□□□□□ -1.89
OTU1YFL044C YML122CQ03207 126 aa3.23□□□□□ -1.89
OTU1YFL044C SEC13Q04491 297 aaKnown RBP3.23□□□□□ -1.89
OTU1YFL044C YTH1Q06102 208 aaPredicted RBP3.23□□□□□ -1.89
OTU1YFL044C SFH1Q06168 426 aa3.23□□□□□ -1.89
OTU1YFL044C YPR127WQ06494 345 aa3.23□□□□□ -1.89
OTU1YFL044C SYO1Q07395 620 aa3.23□□□□□ -1.89
OTU1YFL044C APC2Q12440 853 aa3.23□□□□□ -1.89
OTU1YFL044C THP2O13539 261 aaKnown RBP3.22□□□□□ -1.89
OTU1YFL044C UGA1P17649 471 aa3.22□□□□□ -1.89
OTU1YFL044C MDM10P18409 493 aa3.22□□□□□ -1.89
OTU1YFL044C RPS5P26783 225 aaKnown RBP3.22□□□□□ -1.89
OTU1YFL044C FUN19P28003 413 aaPredicted RBP3.22□□□□□ -1.89
OTU1YFL044C SNC1P31109 117 aa3.22□□□□□ -1.89
OTU1YFL044C YKL102CP34249 101 aa3.22□□□□□ -1.89
OTU1YFL044C YPT53P36019 220 aa3.22□□□□□ -1.89
OTU1YFL044C MRPL4P36517 319 aa3.22□□□□□ -1.89
OTU1YFL044C FLO5P38894 1075 aa3.22□□□□□ -1.89
OTU1YFL044C VHS2P40463 436 aa3.22□□□□□ -1.89
OTU1YFL044C SYG1P40528 902 aa3.22□□□□□ -1.89
OTU1YFL044C EGT2P42835 1041 aa3.22□□□□□ -1.89
OTU1YFL044C NCA3P46955 337 aa3.22□□□□□ -1.89
OTU1YFL044C YIP5P53108 310 aa3.22□□□□□ -1.89
OTU1YFL044C KRE28Q04431 385 aa3.22□□□□□ -1.89
OTU1YFL044C HSP31Q04432 237 aa3.22□□□□□ -1.89
OTU1YFL044C BTS1Q12051 335 aa3.22□□□□□ -1.89
OTU1YFL044C RTC5Q12108 567 aaKnown RBP3.22□□□□□ -1.89
OTU1YFL044C YHR214C-EQ8TGK0 99 aa3.22□□□□□ -1.89
OTU1YFL044C MES1P00958 751 aaKnown RBP3.21□□□□□ -1.9
OTU1YFL044C PDE2P06776 526 aa3.21□□□□□ -1.9
OTU1YFL044C YPK2P18961 677 aa3.21□□□□□ -1.9
OTU1YFL044C RHB1P25378 209 aa3.21□□□□□ -1.9
OTU1YFL044C RPS2P25443 254 aaKnown RBP3.21□□□□□ -1.9
OTU1YFL044C MDH3P32419 343 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
OTU1YFL044C MNS1P32906 549 aa3.21□□□□□ -1.9
OTU1YFL044C JEN1P36035 616 aa3.21□□□□□ -1.9
OTU1YFL044C YKL071WP36086 256 aa3.21□□□□□ -1.9
OTU1YFL044C YBR096WP38256 230 aa3.21□□□□□ -1.9
OTU1YFL044C LAG1P38703 411 aa3.21□□□□□ -1.9
OTU1YFL044C ECM14P38836 430 aa3.21□□□□□ -1.9
OTU1YFL044C MTW1P39731 289 aa3.21□□□□□ -1.9
OTU1YFL044C KRE29P40026 464 aa3.21□□□□□ -1.9
OTU1YFL044C PCL7P40186 285 aa3.21□□□□□ -1.9
OTU1YFL044C SHE4P51534 789 aa3.21□□□□□ -1.9
OTU1YFL044C MTM1P53320 366 aa3.21□□□□□ -1.9
OTU1YFL044C YNL046WP53956 172 aa3.21□□□□□ -1.9
OTU1YFL044C SED1Q01589 338 aa3.21□□□□□ -1.9
OTU1YFL044C PRM15Q03262 622 aa3.21□□□□□ -1.9
OTU1YFL044C PRP3Q03338 469 aaPredicted RBP3.21□□□□□ -1.9
OTU1YFL044C ARP10Q04549 284 aa3.21□□□□□ -1.9
OTU1YFL044C FIT3Q08907 204 aa3.21□□□□□ -1.9
OTU1YFL044C RKM1Q08961 583 aaPredicted RBP3.21□□□□□ -1.9
OTU1YFL044C YPR202WQ08993 238 aa3.21□□□□□ -1.9
OTU1YFL044C MED2Q12124 431 aa3.21□□□□□ -1.9
OTU1YFL044C SIA1Q12212 622 aa3.21□□□□□ -1.9
OTU1YFL044C RTR2Q12378 196 aa3.21□□□□□ -1.9
OTU1YFL044C IZH2Q12442 317 aa3.21□□□□□ -1.9
OTU1YFL044C FSH3Q99369 266 aa3.21□□□□□ -1.9
OTU1YFL044C RPS23AP0CX29 145 aaKnown RBP3.2□□□□□ -1.9
OTU1YFL044C RPS23BP0CX30 145 aa3.2□□□□□ -1.9
OTU1YFL044C RPS16AP0CX51 143 aaKnown RBP3.2□□□□□ -1.9
OTU1YFL044C RPS16BP0CX52 143 aaKnown RBP3.2□□□□□ -1.9
OTU1YFL044C PMR1P13586 950 aa3.2□□□□□ -1.9
OTU1YFL044C ATP7P30902 174 aa3.2□□□□□ -1.9
OTU1YFL044C PRP21P32524 280 aaPredicted RBP3.2□□□□□ -1.9
OTU1YFL044C CLB6P32943 380 aa3.2□□□□□ -1.9
OTU1YFL044C SUR1P33300 382 aa3.2□□□□□ -1.9
OTU1YFL044C RFC3P38629 340 aa3.2□□□□□ -1.9
OTU1YFL044C PHO90P39535 881 aa3.2□□□□□ -1.9
OTU1YFL044C YER184CP39961 794 aa3.2□□□□□ -1.9
OTU1YFL044C GCN20P43535 752 aaKnown RBP3.2□□□□□ -1.9
OTU1YFL044C COS1P53822 381 aa3.2□□□□□ -1.9
OTU1YFL044C MRP51Q02950 344 aa3.2□□□□□ -1.9
OTU1YFL044C YMR102CQ03177 834 aa3.2□□□□□ -1.9
OTU1YFL044C GMC1Q04399 608 aa3.2□□□□□ -1.9
OTU1YFL044C DYN3Q04949 312 aa3.2□□□□□ -1.9
OTU1YFL044C RNH202Q05635 350 aa3.2□□□□□ -1.9
OTU1YFL044C SNT309Q06091 175 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms