RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	SEC10	Q06245	871 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	YLR179C	Q06252	201 aa	Known RBP	0.51	□□□□□ -2.33
HMRA2	YCR096C	BER1	Q06688	274 aa	Known RBP	0.51	□□□□□ -2.33
HMRA2	YCR096C	REX3	Q12090	404 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	YPR011C	Q12251	326 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	SAS5	Q99314	248 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	YAL064W-B	O13512	126 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	YHR032W-A	P0C5N6	59 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	GCD2	P12754	651 aa	Predicted RBP	0.5	□□□□□ -2.33
HMRA2	YCR096C	FRS2	P15625	503 aa	Known RBP	0.5	□□□□□ -2.33
HMRA2	YCR096C	PEX3	P28795	441 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	SCM4	P32564	187 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	YHI9	P38765	294 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	GLE2	P40066	365 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	LOH1	P47055	219 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	NBP35	P52920	328 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	PNC1	P53184	216 aa	Known RBP	0.5	□□□□□ -2.33
HMRA2	YCR096C	SMT3	Q12306	101 aa	Known RBP	0.5	□□□□□ -2.33
HMRA2	YCR096C	YOS9	Q99220	542 aa		0.5	□□□□□ -2.33
HMRA2	YCR096C	CDC7	P06243	507 aa		0.49	□□□□□ -2.33
HMRA2	YCR096C	RPC40	P07703	335 aa	Known RBP	0.49	□□□□□ -2.33
HMRA2	YCR096C	PUT1	P09368	476 aa		0.49	□□□□□ -2.33
HMRA2	YCR096C	RPL4A	P10664	362 aa	Known RBP	0.49	□□□□□ -2.33
HMRA2	YCR096C	VMA2	P16140	517 aa	Known RBP	0.49	□□□□□ -2.33
HMRA2	YCR096C	SAR1	P20606	190 aa	Known RBP	0.49	□□□□□ -2.33
HMRA2	YCR096C	ICL1	P28240	557 aa	Predicted RBP	0.49	□□□□□ -2.33
HMRA2	YCR096C	CTR2	P38865	189 aa		0.49	□□□□□ -2.33
HMRA2	YCR096C	TEM1	P38987	245 aa		0.49	□□□□□ -2.33
HMRA2	YCR096C	RPL10	P41805	221 aa	Known RBP	0.49	□□□□□ -2.33
HMRA2	YCR096C	RPL4B	P49626	362 aa	Known RBP	0.49	□□□□□ -2.33
HMRA2	YCR096C	YNL050C	P53952	270 aa		0.49	□□□□□ -2.33
HMRA2	YCR096C	GPN3	Q06543	272 aa		0.49	□□□□□ -2.33
HMRA2	YCR096C	PST1	Q12355	444 aa		0.49	□□□□□ -2.33
HMRA2	YCR096C	SWI1	P09547	1314 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	UGA1	P17649	471 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	SEC22	P22214	214 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	DRE2	P36152	348 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	PRS4	P38063	326 aa	Predicted RBP	0.48	□□□□□ -2.33
HMRA2	YCR096C	TDA11	P38854	504 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	SPT8	P38915	602 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	VPS45	P38932	577 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	PRM9	P39551	298 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	LOC1	P43586	204 aa	Predicted RBP	0.48	□□□□□ -2.33
HMRA2	YCR096C	FMP33	P46998	180 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	LSB1	P53281	241 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	AAH1	P53909	347 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	TRM44	Q02648	567 aa	Known RBP	0.48	□□□□□ -2.33
HMRA2	YCR096C	SPO19	Q03029	223 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	MGR3	Q04472	501 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	MDY2	Q12285	212 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	MHT1	Q12525	324 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	BOL1	Q3E793	110 aa		0.48	□□□□□ -2.33
HMRA2	YCR096C	STH1	P32597	1359 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	SCL1	P21243	252 aa	Known RBP	0.47	□□□□□ -2.33
HMRA2	YCR096C	OPI1	P21957	404 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	YSR3	P23501	404 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	MEK1	P24719	497 aa	Predicted RBP	0.47	□□□□□ -2.33
HMRA2	YCR096C	YKR045C	P36138	183 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	PEP8	P40335	379 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	YNL260C	P53846	198 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	NUP49	Q02199	472 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	SLD7	Q08457	257 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	BBP1	Q12365	385 aa		0.47	□□□□□ -2.33
HMRA2	YCR096C	RAD3	P06839	778 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	YOL162W	P0CF19	215 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	CWP1	P28319	239 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	PEX4	P29340	183 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	RCN1	P36054	211 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	RCY1	P39531	840 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	YHB1	P39676	399 aa	Known RBP	0.46	□□□□□ -2.34
HMRA2	YCR096C	YER135C	P40082	130 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	OST2	P46964	130 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	SLX9	P53251	210 aa	Predicted RBP	0.46	□□□□□ -2.34
HMRA2	YCR096C	MNT4	P53745	580 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	DAD3	P69850	94 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	MRPS8	Q03799	155 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	ERV41	Q04651	352 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	PEX10	Q05568	337 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	CTR3	Q06686	241 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	PER33	Q12144	273 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	FMP16	Q12497	93 aa		0.46	□□□□□ -2.34
HMRA2	YCR096C	CCA1	P21269	546 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	EHD3	P28817	500 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	MSA2	P36157	363 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	HSM3	P38348	480 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	YHR125W	P38831	101 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	BMT5	P40493	336 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	CIS3	P47001	227 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	CYT2	Q00873	224 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	INM2	Q05533	292 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	ATO3	Q12359	275 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	EMP46	Q12396	444 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	MRPL23	Q12487	163 aa	Predicted RBP	0.45	□□□□□ -2.34
HMRA2	YCR096C	YBL008W-A	Q3E821	79 aa		0.45	□□□□□ -2.34
HMRA2	YCR096C	COX5A	P00424	153 aa		0.44	□□□□□ -2.34
HMRA2	YCR096C	Q0255	P03881	472 aa		0.44	□□□□□ -2.34
HMRA2	YCR096C	FBA1	P14540	359 aa	Known RBP	0.44	□□□□□ -2.34
HMRA2	YCR096C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.44	□□□□□ -2.34	not detected
HMRA2	YCR096C	YBR219C	P38317	127 aa		0.44	□□□□□ -2.34
HMRA2	YCR096C	DSE2	P38844	325 aa		0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 73.9 ms