RNA–Protein interactions for RNA: YBR274W

CHK1, Transcript of Serine/threonine kinase and DNA damage checkpoint effector, yeast

Gene CHK1, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHK1	YBR274W	STE18	P18852	110 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	GPI12	P23797	304 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	DBR1	P24309	405 aa	Known RBP	3.18	□□□□□ -1.9
CHK1	YBR274W	FUN19	P28003	413 aa	Predicted RBP	3.18	□□□□□ -1.9
CHK1	YBR274W	ITR1	P30605	584 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	APE2	P32454	952 aa	Known RBP	3.18	□□□□□ -1.9
CHK1	YBR274W	PTR2	P32901	601 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	LOS1	P33418	1100 aa	Predicted RBP	3.18	□□□□□ -1.9
CHK1	YBR274W	CAF4	P36130	643 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	OM14	P38325	134 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	TRR2	P38816	342 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	ANS1	P38832	159 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	FET3	P38993	636 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	SEC72	P39742	193 aa	Known RBP	3.18	□□□□□ -1.9
CHK1	YBR274W	SHO1	P40073	367 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	SAS2	P40963	338 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	YGR067C	P53243	804 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	HXT11	P54862	567 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	COX20	Q04935	205 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	SCW10	Q04951	389 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	VPS74	Q06385	345 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	LDS2	Q08218	356 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	SGT1	Q08446	395 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	BSC1	Q12140	328 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	NCA2	Q12374	616 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	PRP46	Q12417	451 aa	Predicted RBP	3.18	□□□□□ -1.9
CHK1	YBR274W	YOR032W-A	Q8TGS1	66 aa		3.18	□□□□□ -1.9
CHK1	YBR274W	COX2	P00410	251 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YSF3	P0C074	85 aa	Predicted RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	EXO70	P19658	623 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	ITR2	P30606	609 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	DEG1	P31115	442 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	VMA6	P32366	345 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	MSN2	P33748	704 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	COS9	P36034	407 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	PRS4	P38063	326 aa	Predicted RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	YBR062C	P38239	180 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	LAG1	P38703	411 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	RRP4	P38792	359 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	THO1	P40040	218 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	FMP32	P43557	207 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	FMP33	P46998	180 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	ALB1	P47019	175 aa	Predicted RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	YJR141W	P47172	347 aa	Predicted RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	SSU72	P53538	206 aa	Predicted RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	GOR1	P53839	350 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YIF1	P53845	314 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	REX2	P54964	269 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	YMR087W	Q04299	284 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YPR091C	Q06833	770 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	SDO1	Q07953	250 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	ESA1	Q08649	445 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YOR365C	Q08844	703 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	VIK1	Q12045	647 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	MDM32	Q12171	622 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	NOT5	Q12514	560 aa	Predicted RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	YAK1	P14680	807 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	SNC1	P31109	117 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	COX15	P40086	486 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YIL067C	P40514	678 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YIL060W	P40519	144 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	APS3	P47064	194 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	SEH1	P53011	349 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	TAF6	P53040	516 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	SMM1	P53720	384 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	YNL010W	P53981	241 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	RHO4	Q00246	291 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	RPM2	Q02773	1202 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YDR387C	Q04162	555 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YRA1	Q12159	226 aa	Known RBP	3.17	□□□□□ -1.9
CHK1	YBR274W	NCE102	Q12207	173 aa	RIP-Chip data	3.17	□□□□□ -1.9	not detected
CHK1	YBR274W	YLR108C	Q12259	485 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	YMR230W-A	Q3E7B5	62 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	SAS5	Q99314	248 aa		3.17	□□□□□ -1.9
CHK1	YBR274W	RPL20A	P0CX23	172 aa	Known RBP	3.16	□□□□□ -1.9
CHK1	YBR274W	RPL20B	P0CX24	172 aa	Predicted RBP	3.16	□□□□□ -1.9
CHK1	YBR274W	RPB5	P20434	215 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	UTR1	P21373	530 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	NUP2	P32499	720 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	SEC17	P32602	292 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	CAT2	P32796	670 aa	Known RBP	3.16	□□□□□ -1.9
CHK1	YBR274W	SSO1	P32867	290 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	GDH2	P33327	1092 aa	Known RBP	3.16	□□□□□ -1.9
CHK1	YBR274W	FRE2	P36033	711 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	FES1	P38260	290 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	AYR1	P40471	297 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	YJL118W	P47022	219 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
CHK1	YBR274W	SKI8	Q02793	397 aa	Predicted RBP	3.16	□□□□□ -1.9
CHK1	YBR274W	SPO77	Q06134	477 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	ATG17	Q06410	417 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	YEH2	Q07950	538 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	RNH203	Q12338	110 aa		3.16	□□□□□ -1.9
CHK1	YBR274W	AIM45	Q12480	344 aa	Known RBP	3.16	□□□□□ -1.9
CHK1	YBR274W	RAS2	P01120	322 aa	Known RBP	3.15	□□□□□ -1.91
CHK1	YBR274W	CMK2	P22517	447 aa		3.15	□□□□□ -1.91
CHK1	YBR274W	ERG9	P29704	444 aa		3.15	□□□□□ -1.91
CHK1	YBR274W	MKK1	P32490	508 aa		3.15	□□□□□ -1.91
CHK1	YBR274W	SWD2	P36104	329 aa	Predicted RBP	3.15	□□□□□ -1.91
CHK1	YBR274W	STP2	P38704	541 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms