RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C ZIP1P31111 875 aa2.34□□□□□ -2.03
SHG1YBR258C MCH2P36032 473 aa2.34□□□□□ -2.03
SHG1YBR258C TRR2P38816 342 aa2.34□□□□□ -2.03
SHG1YBR258C PET8P38921 284 aa2.34□□□□□ -2.03
SHG1YBR258C DSE1P40077 573 aa2.34□□□□□ -2.03
SHG1YBR258C RPC17P47076 161 aa2.34□□□□□ -2.03
SHG1YBR258C HST4P53688 370 aa2.34□□□□□ -2.03
SHG1YBR258C SNX41Q04053 625 aa2.34□□□□□ -2.03
SHG1YBR258C ECM19Q06011 112 aa2.34□□□□□ -2.03
SHG1YBR258C YLR030WQ07967 263 aa2.34□□□□□ -2.03
SHG1YBR258C TRM10Q12400 293 aa2.34□□□□□ -2.03
SHG1YBR258C YPR1Q12458 312 aa2.34□□□□□ -2.03
SHG1YBR258C Q0297Q9ZZV8 51 aa2.34□□□□□ -2.03
SHG1YBR258C CCW14O13547 238 aa2.33□□□□□ -2.04
SHG1YBR258C CAR2P07991 424 aaKnown RBP2.33□□□□□ -2.04
SHG1YBR258C YKR104WP0CE69 306 aa2.33□□□□□ -2.04
SHG1YBR258C SAR1P20606 190 aaKnown RBP2.33□□□□□ -2.04
SHG1YBR258C CDC13P32797 924 aaKnown RBP2.33□□□□□ -2.04
SHG1YBR258C URA8P38627 578 aaPredicted RBP2.33□□□□□ -2.04
SHG1YBR258C SIP3P38717 1229 aa2.33□□□□□ -2.04
SHG1YBR258C SLM1P40485 686 aa2.33□□□□□ -2.04
SHG1YBR258C COX16P47081 118 aa2.33□□□□□ -2.04
SHG1YBR258C YJR079WP47126 109 aa2.33□□□□□ -2.04
SHG1YBR258C HSH155P49955 971 aaKnown RBP2.33□□□□□ -2.04
SHG1YBR258C UBC13P52490 153 aa2.33□□□□□ -2.04
SHG1YBR258C VOA1P53262 265 aa2.33□□□□□ -2.04
SHG1YBR258C YNR066CP53752 436 aa2.33□□□□□ -2.04
SHG1YBR258C ACT1P60010 375 aaKnown RBP2.33□□□□□ -2.04
SHG1YBR258C SMD1Q02260 146 aaPredicted RBP2.33□□□□□ -2.04
SHG1YBR258C YPL080CQ02826 108 aa2.33□□□□□ -2.04
SHG1YBR258C YLR446WQ06204 433 aa2.33□□□□□ -2.04
SHG1YBR258C MSA1Q08471 629 aa2.33□□□□□ -2.04
SHG1YBR258C APC9Q12107 265 aa2.33□□□□□ -2.04
SHG1YBR258C DCP1Q12517 231 aaPredicted RBP2.33□□□□□ -2.04
SHG1YBR258C DBP3P20447 523 aaKnown RBP2.32□□□□□ -2.04
SHG1YBR258C DBF2P22204 572 aa2.32□□□□□ -2.04
SHG1YBR258C IFM1P25038 676 aa2.32□□□□□ -2.04
SHG1YBR258C RPB9P27999 122 aa2.32□□□□□ -2.04
SHG1YBR258C MAL32P38158 584 aa2.32□□□□□ -2.04
SHG1YBR258C TDA11P38854 504 aa2.32□□□□□ -2.04
SHG1YBR258C BDH1P39714 382 aa2.32□□□□□ -2.04
SHG1YBR258C GLG2P47011 380 aa2.32□□□□□ -2.04
SHG1YBR258C JHD2P47156 728 aaPredicted RBP2.32□□□□□ -2.04
SHG1YBR258C FMP48P53233 369 aa2.32□□□□□ -2.04
SHG1YBR258C ARP5P53946 755 aa2.32□□□□□ -2.04
SHG1YBR258C SPO19Q03029 223 aa2.32□□□□□ -2.04
SHG1YBR258C UTP15Q04305 513 aaKnown RBP2.32□□□□□ -2.04
SHG1YBR258C ECM18Q04623 453 aa2.32□□□□□ -2.04
SHG1YBR258C SIA1Q12212 622 aa2.32□□□□□ -2.04
SHG1YBR258C UTP23Q12339 254 aaKnown RBP2.32□□□□□ -2.04
SHG1YBR258C PFK27Q12471 397 aaPredicted RBP2.32□□□□□ -2.04
SHG1YBR258C BI3Q9ZZW7 517 aa2.32□□□□□ -2.04
SHG1YBR258C UBR1P19812 1950 aa2.31□□□□□ -2.04
SHG1YBR258C TDH3P00359 332 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SHG1YBR258C CUP2P15315 225 aa2.31□□□□□ -2.04
SHG1YBR258C MRPL20P22354 195 aaPredicted RBP2.31□□□□□ -2.04
SHG1YBR258C ZRT1P32804 376 aa2.31□□□□□ -2.04
SHG1YBR258C ZRT3P34240 503 aa2.31□□□□□ -2.04
SHG1YBR258C GDS1P41913 522 aa2.31□□□□□ -2.04
SHG1YBR258C GCD14P46959 383 aaPredicted RBP2.31□□□□□ -2.04
SHG1YBR258C HIT1P46973 164 aa2.31□□□□□ -2.04
SHG1YBR258C INP1Q03694 420 aa2.31□□□□□ -2.04
SHG1YBR258C YMR244WQ04018 355 aa2.31□□□□□ -2.04
SHG1YBR258C MRX8Q05473 314 aa2.31□□□□□ -2.04
SHG1YBR258C FUS2Q05670 677 aa2.31□□□□□ -2.04
SHG1YBR258C AKR2Q12013 749 aa2.31□□□□□ -2.04
SHG1YBR258C VIK1Q12045 647 aa2.31□□□□□ -2.04
SHG1YBR258C ATP6P00854 259 aa2.3□□□□□ -2.04
SHG1YBR258C RPL31AP0C2H8 113 aaKnown RBP2.3□□□□□ -2.04
SHG1YBR258C AGA2P32781 87 aa2.3□□□□□ -2.04
SHG1YBR258C RPC25P35718 212 aa2.3□□□□□ -2.04
SHG1YBR258C GPX1P36014 167 aa2.3□□□□□ -2.04
SHG1YBR258C PRY2P36110 329 aa2.3□□□□□ -2.04
SHG1YBR258C YIL086CP40503 102 aa2.3□□□□□ -2.04
SHG1YBR258C COS4P43542 379 aa2.3□□□□□ -2.04
SHG1YBR258C SWC4P53201 476 aa2.3□□□□□ -2.04
SHG1YBR258C ERV25P54837 211 aaKnown RBP2.3□□□□□ -2.04
SHG1YBR258C MZM1Q03429 123 aaPredicted RBP2.3□□□□□ -2.04
SHG1YBR258C SEC13Q04491 297 aaKnown RBP2.3□□□□□ -2.04
SHG1YBR258C ERV41Q04651 352 aa2.3□□□□□ -2.04
SHG1YBR258C TFC7Q12415 435 aa2.3□□□□□ -2.04
SHG1YBR258C LAG2Q92325 660 aa2.3□□□□□ -2.04
SHG1YBR258C IZH4Q99393 312 aa2.3□□□□□ -2.04
SHG1YBR258C FRS2P15625 503 aaKnown RBP2.29□□□□□ -2.04
SHG1YBR258C ERD1P16151 362 aa2.29□□□□□ -2.04
SHG1YBR258C RRT12P25381 491 aa2.29□□□□□ -2.04
SHG1YBR258C DAL80P26343 269 aa2.29□□□□□ -2.04
SHG1YBR258C GCG1P32656 232 aaKnown RBP2.29□□□□□ -2.04
SHG1YBR258C IMP3P32899 183 aaPredicted RBP2.29□□□□□ -2.04
SHG1YBR258C YPC1P38298 316 aa2.29□□□□□ -2.04
SHG1YBR258C YIL054WP40524 105 aa2.29□□□□□ -2.04
SHG1YBR258C PFS2P42841 465 aaKnown RBP2.29□□□□□ -2.04
SHG1YBR258C CPR7P47103 393 aa2.29□□□□□ -2.04
SHG1YBR258C MAL12P53341 584 aa2.29□□□□□ -2.04
SHG1YBR258C RNH1Q04740 348 aa2.29□□□□□ -2.04
SHG1YBR258C BCP1Q06338 283 aa2.29□□□□□ -2.04
SHG1YBR258C PBP4Q07362 185 aaKnown RBP2.29□□□□□ -2.04
SHG1YBR258C YOR292CQ08743 309 aa2.29□□□□□ -2.04
SHG1YBR258C VPS68Q12016 184 aa2.29□□□□□ -2.04
SHG1YBR258C TPO4Q12256 659 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms