RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C SDH4P37298 181 aa1.64□□□□□ -2.15
RPB5YBR154C POP8P38208 133 aa1.64□□□□□ -2.15
RPB5YBR154C LDB7P38210 180 aa1.64□□□□□ -2.15
RPB5YBR154C MED8P38304 223 aa1.64□□□□□ -2.15
RPB5YBR154C YHI9P38765 294 aa1.64□□□□□ -2.15
RPB5YBR154C AVT6P40074 448 aa1.64□□□□□ -2.15
RPB5YBR154C MSS2P40990 351 aa1.64□□□□□ -2.15
RPB5YBR154C HOC1P47124 396 aa1.64□□□□□ -2.15
RPB5YBR154C HSH155P49955 971 aaKnown RBP1.64□□□□□ -2.15
RPB5YBR154C USE1P53146 245 aa1.64□□□□□ -2.15
RPB5YBR154C CAX4P53223 239 aa1.64□□□□□ -2.15
RPB5YBR154C NOP13P53883 403 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
RPB5YBR154C FMP41P53889 259 aaKnown RBP1.64□□□□□ -2.15
RPB5YBR154C ASI3P53983 676 aa1.64□□□□□ -2.15
RPB5YBR154C YPL119C-AQ3E751 87 aa1.64□□□□□ -2.15
RPB5YBR154C RPS23AP0CX29 145 aaKnown RBP1.63□□□□□ -2.15
RPB5YBR154C RPS23BP0CX30 145 aa1.63□□□□□ -2.15
RPB5YBR154C MRPL25P23369 157 aa1.63□□□□□ -2.15
RPB5YBR154C RPL24BP24000 155 aaKnown RBP1.63□□□□□ -2.15
RPB5YBR154C ERG2P32352 222 aa1.63□□□□□ -2.15
RPB5YBR154C DOA4P32571 926 aa1.63□□□□□ -2.15
RPB5YBR154C YKT6P36015 200 aaKnown RBP1.63□□□□□ -2.15
RPB5YBR154C JEN1P36035 616 aa1.63□□□□□ -2.15
RPB5YBR154C FZO1P38297 855 aa1.63□□□□□ -2.15
RPB5YBR154C PHO89P38361 574 aa1.63□□□□□ -2.15
RPB5YBR154C THO1P40040 218 aaKnown RBP1.63□□□□□ -2.15
RPB5YBR154C SYS1P41544 203 aa1.63□□□□□ -2.15
RPB5YBR154C RPC17P47076 161 aa1.63□□□□□ -2.15
RPB5YBR154C UFD1P53044 361 aa1.63□□□□□ -2.15
RPB5YBR154C SLX9P53251 210 aaPredicted RBP1.63□□□□□ -2.15
RPB5YBR154C PGA2P53903 129 aa1.63□□□□□ -2.15
RPB5YBR154C YNL095CP53932 642 aa1.63□□□□□ -2.15
RPB5YBR154C YPR098CQ06089 161 aa1.63□□□□□ -2.15
RPB5YBR154C SPO77Q06134 477 aa1.63□□□□□ -2.15
RPB5YBR154C DXO1Q06349 442 aa1.63□□□□□ -2.15
RPB5YBR154C ATG17Q06410 417 aa1.63□□□□□ -2.15
RPB5YBR154C YCT1Q12235 531 aa1.63□□□□□ -2.15
RPB5YBR154C SNU23Q12368 194 aaPredicted RBP1.63□□□□□ -2.15
RPB5YBR154C NHP6BP11633 99 aaKnown RBP1.62□□□□□ -2.15
RPB5YBR154C TCP1P12612 559 aaKnown RBP1.62□□□□□ -2.15
RPB5YBR154C POX1P13711 748 aa1.62□□□□□ -2.15
RPB5YBR154C CPT1P17898 393 aa1.62□□□□□ -2.15
RPB5YBR154C EHD3P28817 500 aa1.62□□□□□ -2.15
RPB5YBR154C HMT1P38074 348 aa1.62□□□□□ -2.15
RPB5YBR154C HEK2P38199 381 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
RPB5YBR154C YHL049CP38722 271 aa1.62□□□□□ -2.15
RPB5YBR154C YHL044WP38727 235 aa1.62□□□□□ -2.15
RPB5YBR154C YJR079WP47126 109 aa1.62□□□□□ -2.15
RPB5YBR154C JHD2P47156 728 aaPredicted RBP1.62□□□□□ -2.15
RPB5YBR154C SWT21P53873 357 aaPredicted RBP1.62□□□□□ -2.15
RPB5YBR154C SMD1Q02260 146 aaPredicted RBP1.62□□□□□ -2.15
RPB5YBR154C GTO3Q04806 366 aa1.62□□□□□ -2.15
RPB5YBR154C PEX10Q05568 337 aa1.62□□□□□ -2.15
RPB5YBR154C NNT1Q05874 261 aa1.62□□□□□ -2.15
RPB5YBR154C COQ10Q08058 207 aa1.62□□□□□ -2.15
RPB5YBR154C ADF1Q2V2Q1 113 aa1.62□□□□□ -2.15
RPB5YBR154C BEM2P39960 2167 aaKnown RBP1.62□□□□□ -2.15
RPB5YBR154C RHO1P06780 209 aaKnown RBP1.61□□□□□ -2.15
RPB5YBR154C ARG80P07249 177 aa1.61□□□□□ -2.15
RPB5YBR154C COQ1P18900 473 aa1.61□□□□□ -2.15
RPB5YBR154C PBN1P25580 416 aa1.61□□□□□ -2.15
RPB5YBR154C PPA2P28239 310 aa1.61□□□□□ -2.15
RPB5YBR154C VMA6P32366 345 aaKnown RBP1.61□□□□□ -2.15
RPB5YBR154C VPS21P36017 210 aaKnown RBP1.61□□□□□ -2.15
RPB5YBR154C YKL075CP36083 450 aa1.61□□□□□ -2.15
RPB5YBR154C YBR096WP38256 230 aa1.61□□□□□ -2.15
RPB5YBR154C CUE1P38428 203 aa1.61□□□□□ -2.15
RPB5YBR154C GOS1P38736 223 aa1.61□□□□□ -2.15
RPB5YBR154C ECM14P38836 430 aa1.61□□□□□ -2.15
RPB5YBR154C RPE1P46969 238 aa1.61□□□□□ -2.15
RPB5YBR154C YGL088WP53151 121 aa1.61□□□□□ -2.15
RPB5YBR154C AAH1P53909 347 aa1.61□□□□□ -2.15
RPB5YBR154C OSH6Q02201 448 aa1.61□□□□□ -2.15
RPB5YBR154C CTF19Q02732 369 aa1.61□□□□□ -2.15
RPB5YBR154C YMR166CQ03829 368 aa1.61□□□□□ -2.15
RPB5YBR154C TVP15Q03860 143 aa1.61□□□□□ -2.15
RPB5YBR154C PLB3Q08108 686 aa1.61□□□□□ -2.15
RPB5YBR154C RRS1Q08746 203 aaKnown RBP1.61□□□□□ -2.15
RPB5YBR154C YPL264CQ08980 353 aa1.61□□□□□ -2.15
RPB5YBR154C ATG5Q12380 294 aa1.61□□□□□ -2.15
RPB5YBR154C THP2O13539 261 aaKnown RBP1.6□□□□□ -2.15
RPB5YBR154C YKR104WP0CE69 306 aa1.6□□□□□ -2.15
RPB5YBR154C COS2P0CX12 379 aa1.6□□□□□ -2.15
RPB5YBR154C COS3P0CX13 379 aa1.6□□□□□ -2.15
RPB5YBR154C YAK1P14680 807 aa1.6□□□□□ -2.15
RPB5YBR154C PRE7P23724 241 aaKnown RBP1.6□□□□□ -2.15
RPB5YBR154C DPB2P24482 689 aaPredicted RBP1.6□□□□□ -2.15
RPB5YBR154C YCR102CP25608 368 aa1.6□□□□□ -2.15
RPB5YBR154C SGE1P33335 543 aa1.6□□□□□ -2.15
RPB5YBR154C CSG2P35206 410 aa1.6□□□□□ -2.15
RPB5YBR154C ARN2P38724 620 aa1.6□□□□□ -2.15
RPB5YBR154C COX15P40086 486 aa1.6□□□□□ -2.15
RPB5YBR154C YRB1P41920 201 aaKnown RBP1.6□□□□□ -2.15
RPB5YBR154C SNZ3P43545 298 aa1.6□□□□□ -2.15
RPB5YBR154C CGR1P53188 120 aa1.6□□□□□ -2.15
RPB5YBR154C RSM27P53305 110 aa1.6□□□□□ -2.15
RPB5YBR154C RHO3Q00245 231 aaKnown RBP1.6□□□□□ -2.15
RPB5YBR154C DCR2Q05924 578 aa1.6□□□□□ -2.15
RPB5YBR154C YPR147CQ06522 304 aaKnown RBP1.6□□□□□ -2.15
RPB5YBR154C NCB2Q92317 146 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms