RNA–Protein interactions for RNA: YBL002W

HTB2, Transcript of Histone H2B, yeast

Gene HTB2, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTB2	YBL002W	MDH2	P22133	377 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	PEX3	P28795	441 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	SMI1	P32566	505 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	PRM10	P42946	383 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	OST2	P46964	130 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	PEX31	P53203	462 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	CYT2	Q00873	224 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	PEX10	Q05568	337 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	YLR297W	Q05899	129 aa		0.42	□□□□□ -2.34
HTB2	YBL002W	FKS1	P38631	1876 aa	Known RBP	0.41	□□□□□ -2.34
HTB2	YBL002W	UBR2	Q07963	1872 aa		0.41	□□□□□ -2.34
HTB2	YBL002W	YHR032W-A	P0C5N6	59 aa		0.41	□□□□□ -2.34
HTB2	YBL002W	RPL2A	P0CX45	254 aa	Known RBP	0.41	□□□□□ -2.34
HTB2	YBL002W	RPL2B	P0CX46	254 aa	Known RBP	0.41	□□□□□ -2.34
HTB2	YBL002W	UIP5	P36137	443 aa		0.41	□□□□□ -2.34
HTB2	YBL002W	VTC1	P40046	129 aa	RIP-Chip data	0.41	□□□□□ -2.34	not detected
HTB2	YBL002W	AGP3	P43548	558 aa		0.41	□□□□□ -2.34
HTB2	YBL002W	SEC10	Q06245	871 aa		0.41	□□□□□ -2.34
HTB2	YBL002W	CSI2	Q08054	341 aa		0.41	□□□□□ -2.34
HTB2	YBL002W	SLD7	Q08457	257 aa		0.41	□□□□□ -2.34
HTB2	YBL002W	AI5_BETA	Q9ZZX0	354 aa		0.41	□□□□□ -2.34
HTB2	YBL002W	ILV1	P00927	576 aa	Known RBP	0.4	□□□□□ -2.35
HTB2	YBL002W	DDI2	P0CH63	225 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	DDI3	P0CH64	225 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	PET18	P25362	215 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	CWP1	P28319	239 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	SWI3	P32591	825 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	PHO88	P38264	188 aa	Predicted RBP	0.4	□□□□□ -2.35
HTB2	YBL002W	RCY1	P39531	840 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	SSO2	P39926	295 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	LOH1	P47055	219 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	TRM44	Q02648	567 aa	Known RBP	0.4	□□□□□ -2.35
HTB2	YBL002W	VPS20	Q04272	221 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.4	□□□□□ -2.35	not detected
HTB2	YBL002W	ATO3	Q12359	275 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	YOS9	Q99220	542 aa		0.4	□□□□□ -2.35
HTB2	YBL002W	RPL4A	P10664	362 aa	Known RBP	0.39	□□□□□ -2.35
HTB2	YBL002W	ICL1	P28240	557 aa	Predicted RBP	0.39	□□□□□ -2.35
HTB2	YBL002W	YHL049C	P38722	271 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	YHR022C	P38763	256 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	TDA11	P38854	504 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	CTR2	P38865	189 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	AVT2	P39981	480 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	RPL4B	P49626	362 aa	Known RBP	0.39	□□□□□ -2.35
HTB2	YBL002W	SLX9	P53251	210 aa	Predicted RBP	0.39	□□□□□ -2.35
HTB2	YBL002W	YNL050C	P53952	270 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	ASI3	P53983	676 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	GPN3	Q06543	272 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	CTR3	Q06686	241 aa		0.39	□□□□□ -2.35
HTB2	YBL002W	Q0255	P03881	472 aa		0.38	□□□□□ -2.35
HTB2	YBL002W	GPI12	P23797	304 aa		0.38	□□□□□ -2.35
HTB2	YBL002W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.38	□□□□□ -2.35	not detected
HTB2	YBL002W	RCN1	P36054	211 aa		0.38	□□□□□ -2.35
HTB2	YBL002W	PRS4	P38063	326 aa	Predicted RBP	0.38	□□□□□ -2.35
HTB2	YBL002W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.38	□□□□□ -2.35	not detected
HTB2	YBL002W	PRM9	P39551	298 aa		0.38	□□□□□ -2.35
HTB2	YBL002W	ERG25	P53045	309 aa		0.38	□□□□□ -2.35
HTB2	YBL002W	SFH1	Q06168	426 aa		0.38	□□□□□ -2.35
HTB2	YBL002W	YLR162W	Q06235	118 aa		0.38	□□□□□ -2.35
HTB2	YBL002W	YPR011C	Q12251	326 aa		0.38	□□□□□ -2.35
HTB2	YBL002W	RPP0	P05317	312 aa	Known RBP	0.37	□□□□□ -2.35
HTB2	YBL002W	UGA1	P17649	471 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	SEC22	P22214	214 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	ARC15	P40518	154 aa	RIP-Chip data	0.37	□□□□□ -2.35	not detected
HTB2	YBL002W	NBP35	P52920	328 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	VOA1	P53262	265 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	CPD1	P53314	239 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	SWS2	P53937	143 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	RRG8	Q06109	277 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	BER1	Q06688	274 aa	Known RBP	0.37	□□□□□ -2.35
HTB2	YBL002W	VAC14	Q06708	880 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	AKR2	Q12013	749 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	BBP1	Q12365	385 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	EMP46	Q12396	444 aa		0.37	□□□□□ -2.35
HTB2	YBL002W	SAR1	P20606	190 aa	Known RBP	0.36	□□□□□ -2.35
HTB2	YBL002W	UPS2	P35200	230 aa		0.36	□□□□□ -2.35
HTB2	YBL002W	HIS2	P38635	335 aa		0.36	□□□□□ -2.35
HTB2	YBL002W	APE4	P38821	490 aa		0.36	□□□□□ -2.35
HTB2	YBL002W	SHC1	P39000	512 aa		0.36	□□□□□ -2.35
HTB2	YBL002W	RPL13B	P40212	199 aa	Known RBP	0.36	□□□□□ -2.35
HTB2	YBL002W	BUD25	P85052	153 aa		0.36	□□□□□ -2.35
HTB2	YBL002W	CDC14	Q00684	551 aa		0.36	□□□□□ -2.35
HTB2	YBL002W	ABZ2	Q03266	374 aa		0.36	□□□□□ -2.35
HTB2	YBL002W	VBA1	Q04301	562 aa		0.36	□□□□□ -2.35
HTB2	YBL002W	RIO1	Q12196	484 aa	Known RBP	0.36	□□□□□ -2.35
HTB2	YBL002W	RPL13A	Q12690	199 aa	Predicted RBP	0.36	□□□□□ -2.35
HTB2	YBL002W	RPC40	P07703	335 aa	Known RBP	0.35	□□□□□ -2.35
HTB2	YBL002W	YER188C-A	P0C0V2	99 aa		0.35	□□□□□ -2.35
HTB2	YBL002W	RPC25	P35718	212 aa		0.35	□□□□□ -2.35
HTB2	YBL002W	COS8	P38723	381 aa		0.35	□□□□□ -2.35
HTB2	YBL002W	YHR125W	P38831	101 aa		0.35	□□□□□ -2.35
HTB2	YBL002W	RPL37A	P49166	88 aa	Known RBP	0.35	□□□□□ -2.35
HTB2	YBL002W	YGR026W	P53217	278 aa		0.35	□□□□□ -2.35
HTB2	YBL002W	CTF19	Q02732	369 aa		0.35	□□□□□ -2.35
HTB2	YBL002W	COX5A	P00424	153 aa		0.34	□□□□□ -2.36
HTB2	YBL002W	VAR1	P02381	398 aa		0.34	□□□□□ -2.36
HTB2	YBL002W	POF1	P25576	258 aa		0.34	□□□□□ -2.36
HTB2	YBL002W	OAC1	P32332	324 aa		0.34	□□□□□ -2.36
HTB2	YBL002W	ERV15	P38312	142 aa		0.34	□□□□□ -2.36
HTB2	YBL002W	TCD1	P38756	429 aa		0.34	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 131.9 ms