RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR60, Length 104 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR60snR60 TAD2P47058 250 aa0.31□□□□□ -2.36
snR60snR60 TRM44Q02648 567 aaKnown RBP0.31□□□□□ -2.36
snR60snR60 TAZ1Q06510 381 aa0.31□□□□□ -2.36
snR60snR60 RPL2AP0CX45 254 aaKnown RBP0.3□□□□□ -2.36
snR60snR60 RPL2BP0CX46 254 aaKnown RBP0.3□□□□□ -2.36
snR60snR60 RPL18AP0CX49 186 aaKnown RBP0.3□□□□□ -2.36
snR60snR60 RPL18BP0CX50 186 aaKnown RBP0.3□□□□□ -2.36
snR60snR60 MDH2P22133 377 aa0.3□□□□□ -2.36
snR60snR60 HMT1P38074 348 aa0.3□□□□□ -2.36
snR60snR60 MDM34P53083 459 aa0.3□□□□□ -2.36
snR60snR60 PRM15Q03262 622 aa0.3□□□□□ -2.36
snR60snR60 PEX10Q05568 337 aa0.3□□□□□ -2.36
snR60snR60 DBP9Q06218 594 aaKnown RBP0.3□□□□□ -2.36
snR60snR60 LOA1Q06508 300 aa0.3□□□□□ -2.36
snR60snR60 YOR114WQ12219 294 aa0.3□□□□□ -2.36
snR60snR60 GEP5Q12393 293 aa0.3□□□□□ -2.36
snR60snR60 YPR064WQ12492 139 aa0.3□□□□□ -2.36
snR60snR60 SAS5Q99314 248 aa0.3□□□□□ -2.36
snR60snR60 IZH4Q99393 312 aa0.3□□□□□ -2.36
snR60snR60 RAD3P06839 778 aa0.29□□□□□ -2.36
snR60snR60 DSF1P0CX08 502 aa0.29□□□□□ -2.36
snR60snR60 YNR073CP0CX09 502 aa0.29□□□□□ -2.36
snR60snR60 PEX4P29340 183 aa0.29□□□□□ -2.36
snR60snR60 SUA5P32579 426 aa0.29□□□□□ -2.36
snR60snR60 TEM1P38987 245 aa0.29□□□□□ -2.36
snR60snR60 BMT5P40493 336 aa0.29□□□□□ -2.36
snR60snR60 AGX1P43567 385 aa0.29□□□□□ -2.36
snR60snR60 NIF3P53081 288 aa0.29□□□□□ -2.36
snR60snR60 FMP41P53889 259 aaKnown RBP0.29□□□□□ -2.36
snR60snR60 EOS1P53938 366 aa0.29□□□□□ -2.36
snR60snR60 RSM10Q03201 203 aa0.29□□□□□ -2.36
snR60snR60 SDC1Q03323 175 aa0.29□□□□□ -2.36
snR60snR60 MHT1Q12525 324 aa0.29□□□□□ -2.36
snR60snR60 RNR2P09938 399 aaKnown RBP0.28□□□□□ -2.36
snR60snR60 VMA2P16140 517 aaKnown RBP0.28□□□□□ -2.36
snR60snR60 RNP1P32385 249 aa0.28□□□□□ -2.36
snR60snR60 UPS2P35200 230 aa0.28□□□□□ -2.36
snR60snR60 SIF2P38262 535 aa0.28□□□□□ -2.36
snR60snR60 YBR219CP38317 127 aa0.28□□□□□ -2.36
snR60snR60 LIN1P38852 340 aaPredicted RBP0.28□□□□□ -2.36
snR60snR60 AVT2P39981 480 aa0.28□□□□□ -2.36
snR60snR60 DPP1Q05521 289 aa0.28□□□□□ -2.36
snR60snR60 CSI2Q08054 341 aa0.28□□□□□ -2.36
snR60snR60 PET494P07390 489 aaPredicted RBP0.27□□□□□ -2.37
snR60snR60 TAL1P15019 335 aaKnown RBP0.27□□□□□ -2.37
snR60snR60 MSS116P15424 664 aaKnown RBP0.27□□□□□ -2.37
snR60snR60 RXT2P38255 430 aa0.27□□□□□ -2.37
snR60snR60 SHC1P39000 512 aa0.27□□□□□ -2.37
snR60snR60 RCY1P39531 840 aa0.27□□□□□ -2.37
snR60snR60 ASI3P53983 676 aa0.27□□□□□ -2.37
snR60snR60 APC9Q12107 265 aa0.27□□□□□ -2.37
snR60snR60 RIO1Q12196 484 aaKnown RBP0.27□□□□□ -2.37
snR60snR60 RRP42Q12277 265 aaPredicted RBP0.27□□□□□ -2.37
snR60snR60 YPR1Q12458 312 aa0.27□□□□□ -2.37
snR60snR60 VAR1P02381 398 aa0.26□□□□□ -2.37
snR60snR60 RPS3P05750 240 aaKnown RBP0.26□□□□□ -2.37
snR60snR60 CPA1P07258 411 aaKnown RBP0.26□□□□□ -2.37
snR60snR60 DDI2P0CH63 225 aa0.26□□□□□ -2.37
snR60snR60 DDI3P0CH64 225 aa0.26□□□□□ -2.37
snR60snR60 RPL13BP40212 199 aaKnown RBP0.26□□□□□ -2.37
snR60snR60 JEM1P40358 645 aa0.26□□□□□ -2.37
snR60snR60 SMD3P43321 101 aaKnown RBP0.26□□□□□ -2.37
snR60snR60 RPL37AP49166 88 aaKnown RBP0.26□□□□□ -2.37
snR60snR60 KEL2P50090 882 aa0.26□□□□□ -2.37
snR60snR60 VPS60Q03390 229 aa0.26□□□□□ -2.37
snR60snR60 MRPS8Q03799 155 aa0.26□□□□□ -2.37
snR60snR60 TAF9Q05027 157 aa0.26□□□□□ -2.37
snR60snR60 YLR162WQ06235 118 aa0.26□□□□□ -2.37
snR60snR60 MEU1Q07938 337 aaKnown RBP RIP-Chip data0.26□□□□□ -2.37not detected
snR60snR60 SAM4Q08985 325 aaKnown RBP0.26□□□□□ -2.37
snR60snR60 FRE6Q12473 712 aa0.26□□□□□ -2.37
snR60snR60 RPL13AQ12690 199 aaPredicted RBP0.26□□□□□ -2.37
snR60snR60 CYR1P08678 2026 aaKnown RBP0.25□□□□□ -2.37
snR60snR60 RPS0AP32905 252 aaKnown RBP0.25□□□□□ -2.37
snR60snR60 RPC37P36121 282 aa0.25□□□□□ -2.37
snR60snR60 ECM13P38195 257 aa0.25□□□□□ -2.37
snR60snR60 TCD1P38756 429 aa0.25□□□□□ -2.37
snR60snR60 VTC1P40046 129 aaRIP-Chip data0.25□□□□□ -2.37not detected
snR60snR60 OST2P46964 130 aa0.25□□□□□ -2.37
snR60snR60 YJL028WP47062 111 aa0.25□□□□□ -2.37
snR60snR60 CYT2Q00873 224 aa0.25□□□□□ -2.37
snR60snR60 YMR209CQ03648 457 aa0.25□□□□□ -2.37
snR60snR60 CTR3Q06686 241 aa0.25□□□□□ -2.37
snR60snR60 PBP4Q07362 185 aaKnown RBP0.25□□□□□ -2.37
snR60snR60 GAL3P13045 520 aa0.24□□□□□ -2.37
snR60snR60 SPT4P32914 102 aaPredicted RBP0.24□□□□□ -2.37
snR60snR60 YKL063CP35725 167 aa0.24□□□□□ -2.37
snR60snR60 PHO88P38264 188 aaPredicted RBP0.24□□□□□ -2.37
snR60snR60 YHR022CP38763 256 aa0.24□□□□□ -2.37
snR60snR60 PRM10P42946 383 aa0.24□□□□□ -2.37
snR60snR60 IBA57P47158 497 aa0.24□□□□□ -2.37
snR60snR60 ERG25P53045 309 aa0.24□□□□□ -2.37
snR60snR60 CUE3P53137 624 aaKnown RBP0.24□□□□□ -2.37
snR60snR60 BUD25P85052 153 aa0.24□□□□□ -2.37
snR60snR60 FKS1P38631 1876 aaKnown RBP0.24□□□□□ -2.37
snR60snR60 YMR316C-AI2HB70 103 aa0.23□□□□□ -2.37
snR60snR60 CAM1P29547 415 aaKnown RBP0.23□□□□□ -2.37
snR60snR60 MDH3P32419 343 aaKnown RBP RIP-Chip data0.23□□□□□ -2.37not detected
snR60snR60 YJR079WP47126 109 aa0.23□□□□□ -2.37
snR60snR60 YPL077CQ02831 240 aa0.23□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms