RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C YGR015CP53208 328 aa3.55□□□□□ -1.84
VPS21YOR089C LSB1P53281 241 aa3.55□□□□□ -1.84
VPS21YOR089C EBS1Q03466 884 aaKnown RBP3.55□□□□□ -1.84
VPS21YOR089C ENT5Q03769 411 aaKnown RBP3.55□□□□□ -1.84
VPS21YOR089C FUS2Q05670 677 aa3.55□□□□□ -1.84
VPS21YOR089C LIP2Q06005 328 aa3.55□□□□□ -1.84
VPS21YOR089C YLR446WQ06204 433 aa3.55□□□□□ -1.84
VPS21YOR089C VIK1Q12045 647 aa3.55□□□□□ -1.84
VPS21YOR089C SGT2Q12118 346 aaKnown RBP3.55□□□□□ -1.84
VPS21YOR089C MCT1Q12283 360 aa3.55□□□□□ -1.84
VPS21YOR089C RPL21BQ12672 160 aaKnown RBP3.55□□□□□ -1.84
VPS21YOR089C LAG2Q92325 660 aa3.55□□□□□ -1.84
VPS21YOR089C PRB1P09232 635 aa3.54□□□□□ -1.84
VPS21YOR089C ASP3-2P0CX77 362 aa3.54□□□□□ -1.84
VPS21YOR089C ASP3-3P0CX78 362 aa3.54□□□□□ -1.84
VPS21YOR089C ASP3-4P0CX79 362 aa3.54□□□□□ -1.84
VPS21YOR089C ASP3-1P0CZ17 362 aa3.54□□□□□ -1.84
VPS21YOR089C SPS100P13130 326 aa3.54□□□□□ -1.84
VPS21YOR089C BGL2P15703 313 aaKnown RBP3.54□□□□□ -1.84
VPS21YOR089C MRPL20P22354 195 aaPredicted RBP3.54□□□□□ -1.84
VPS21YOR089C CMK2P22517 447 aa3.54□□□□□ -1.84
VPS21YOR089C IMP3P32899 183 aaPredicted RBP3.54□□□□□ -1.84
VPS21YOR089C CBF5P33322 483 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
VPS21YOR089C PHO88P38264 188 aaPredicted RBP3.54□□□□□ -1.84
VPS21YOR089C SHE3P38272 425 aaKnown RBP3.54□□□□□ -1.84
VPS21YOR089C CHL4P38907 458 aa3.54□□□□□ -1.84
VPS21YOR089C DDI1P40087 428 aa3.54□□□□□ -1.84
VPS21YOR089C COA1P40452 197 aa3.54□□□□□ -1.84
VPS21YOR089C GDS1P41913 522 aa3.54□□□□□ -1.84
VPS21YOR089C YJR054WP47114 497 aa3.54□□□□□ -1.84
VPS21YOR089C PAL1Q05518 499 aaKnown RBP3.54□□□□□ -1.84
VPS21YOR089C PER33Q12144 273 aa3.54□□□□□ -1.84
VPS21YOR089C BI3Q9ZZW7 517 aa3.54□□□□□ -1.84
VPS21YOR089C RPS14AP06367 137 aaKnown RBP3.53□□□□□ -1.84
VPS21YOR089C PFS1P38872 237 aa3.53□□□□□ -1.84
VPS21YOR089C BAT1P38891 393 aaKnown RBP3.53□□□□□ -1.84
VPS21YOR089C TIM17P39515 158 aa3.53□□□□□ -1.84
VPS21YOR089C RPS14BP39516 138 aaKnown RBP3.53□□□□□ -1.84
VPS21YOR089C NPT1P39683 429 aaKnown RBP3.53□□□□□ -1.84
VPS21YOR089C STB1P42845 420 aa3.53□□□□□ -1.84
VPS21YOR089C IGD1P43598 195 aa3.53□□□□□ -1.84
VPS21YOR089C YPT32P51996 222 aaKnown RBP3.53□□□□□ -1.84
VPS21YOR089C VHT1P53241 593 aa3.53□□□□□ -1.84
VPS21YOR089C GMC1Q04399 608 aa3.53□□□□□ -1.84
VPS21YOR089C PAM18Q07914 168 aa3.53□□□□□ -1.84
VPS21YOR089C TLG2Q08144 397 aa3.53□□□□□ -1.84
VPS21YOR089C BSC6Q08280 497 aa3.53□□□□□ -1.84
VPS21YOR089C ADH2P00331 348 aaKnown RBP3.52□□□□□ -1.85
VPS21YOR089C YCR016WP25617 290 aaKnown RBP3.52□□□□□ -1.85
VPS21YOR089C CWP1P28319 239 aa3.52□□□□□ -1.85
VPS21YOR089C CYM1P32898 989 aa3.52□□□□□ -1.85
VPS21YOR089C YKL187CP34231 750 aa3.52□□□□□ -1.85
VPS21YOR089C PRS4P38063 326 aaPredicted RBP3.52□□□□□ -1.85
VPS21YOR089C SHE1P38200 338 aa3.52□□□□□ -1.85
VPS21YOR089C GPI18P38211 433 aa3.52□□□□□ -1.85
VPS21YOR089C YPC1P38298 316 aa3.52□□□□□ -1.85
VPS21YOR089C RCK1P38622 512 aa3.52□□□□□ -1.85
VPS21YOR089C SIP3P38717 1229 aa3.52□□□□□ -1.85
VPS21YOR089C HEM14P40012 539 aa3.52□□□□□ -1.85
VPS21YOR089C BIO3P50277 480 aa3.52□□□□□ -1.85
VPS21YOR089C NBP1P52919 319 aaPredicted RBP3.52□□□□□ -1.85
VPS21YOR089C SDT1P53078 280 aa3.52□□□□□ -1.85
VPS21YOR089C PGA2P53903 129 aa3.52□□□□□ -1.85
VPS21YOR089C KTR6P54070 446 aa3.52□□□□□ -1.85
VPS21YOR089C VBA1Q04301 562 aa3.52□□□□□ -1.85
VPS21YOR089C CTR3Q06686 241 aa3.52□□□□□ -1.85
VPS21YOR089C HRT3Q12347 344 aa3.52□□□□□ -1.85
VPS21YOR089C FOL3Q12676 427 aaPredicted RBP3.52□□□□□ -1.85
VPS21YOR089C FKS1P38631 1876 aaKnown RBP3.52□□□□□ -1.85
VPS21YOR089C RPB4P20433 221 aaPredicted RBP3.51□□□□□ -1.85
VPS21YOR089C TPS2P31688 896 aaKnown RBP3.51□□□□□ -1.85
VPS21YOR089C SPT4P32914 102 aaPredicted RBP3.51□□□□□ -1.85
VPS21YOR089C YER085CP40058 173 aa3.51□□□□□ -1.85
VPS21YOR089C RPL10P41805 221 aaKnown RBP3.51□□□□□ -1.85
VPS21YOR089C TIS11P47977 285 aa3.51□□□□□ -1.85
VPS21YOR089C LIF1P53150 421 aa3.51□□□□□ -1.85
VPS21YOR089C SDS23P53172 527 aa3.51□□□□□ -1.85
VPS21YOR089C COG7P53195 279 aa3.51□□□□□ -1.85
VPS21YOR089C ADD37Q03233 198 aa3.51□□□□□ -1.85
VPS21YOR089C YDR209CQ03480 137 aa3.51□□□□□ -1.85
VPS21YOR089C KRE28Q04431 385 aa3.51□□□□□ -1.85
VPS21YOR089C YDR115WQ04598 105 aa3.51□□□□□ -1.85
VPS21YOR089C TAF9Q05027 157 aa3.51□□□□□ -1.85
VPS21YOR089C YLR283WQ05867 314 aa3.51□□□□□ -1.85
VPS21YOR089C YTH1Q06102 208 aaPredicted RBP3.51□□□□□ -1.85
VPS21YOR089C SDO1Q07953 250 aaKnown RBP3.51□□□□□ -1.85
VPS21YOR089C ARO4P32449 370 aaKnown RBP3.5□□□□□ -1.85
VPS21YOR089C SUA5P32579 426 aa3.5□□□□□ -1.85
VPS21YOR089C MSN4P33749 630 aa3.5□□□□□ -1.85
VPS21YOR089C SDS24P38314 527 aa3.5□□□□□ -1.85
VPS21YOR089C BIG1P38813 335 aa3.5□□□□□ -1.85
VPS21YOR089C FIS1P40515 155 aa3.5□□□□□ -1.85
VPS21YOR089C ASG7P46993 209 aa3.5□□□□□ -1.85
VPS21YOR089C YGL039WP53183 348 aaKnown RBP3.5□□□□□ -1.85
VPS21YOR089C TIM21P53220 239 aa3.5□□□□□ -1.85
VPS21YOR089C OST6Q03723 332 aa3.5□□□□□ -1.85
VPS21YOR089C SML1Q04964 104 aa3.5□□□□□ -1.85
VPS21YOR089C SFH1Q06168 426 aa3.5□□□□□ -1.85
VPS21YOR089C PEX30Q06169 523 aa3.5□□□□□ -1.85
VPS21YOR089C MMT2Q08970 484 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms