RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W PAM18Q07914 168 aa2.5□□□□□ -2.01
SIN3YOL004W SIA1Q12212 622 aa2.5□□□□□ -2.01
SIN3YOL004W TY1A-BLQ12266 440 aa2.5□□□□□ -2.01
SIN3YOL004W TDH2P00358 332 aaKnown RBP2.49□□□□□ -2.01
SIN3YOL004W TDH3P00359 332 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SIN3YOL004W RPB8P20436 146 aa2.49□□□□□ -2.01
SIN3YOL004W HXT2P23585 541 aa2.49□□□□□ -2.01
SIN3YOL004W VMA5P31412 392 aaKnown RBP2.49□□□□□ -2.01
SIN3YOL004W LOS1P33418 1100 aaPredicted RBP2.49□□□□□ -2.01
SIN3YOL004W TIP20P33891 701 aa2.49□□□□□ -2.01
SIN3YOL004W GPX1P36014 167 aa2.49□□□□□ -2.01
SIN3YOL004W YER184CP39961 794 aa2.49□□□□□ -2.01
SIN3YOL004W ATG27P46989 271 aa2.49□□□□□ -2.01
SIN3YOL004W MTL1P53214 551 aa2.49□□□□□ -2.01
SIN3YOL004W ROT1Q03691 256 aa2.49□□□□□ -2.01
SIN3YOL004W BER1Q06688 274 aaKnown RBP2.49□□□□□ -2.01
SIN3YOL004W RDL1Q12305 139 aaKnown RBP2.49□□□□□ -2.01
SIN3YOL004W ADE17P38009 592 aaKnown RBP2.49□□□□□ -2.01
SIN3YOL004W PHM8P40025 321 aa2.49□□□□□ -2.01
SIN3YOL004W ARG2P40360 574 aa2.49□□□□□ -2.01
SIN3YOL004W AIF1P52923 378 aa2.49□□□□□ -2.01
SIN3YOL004W IRC15Q02733 499 aa2.49□□□□□ -2.01
SIN3YOL004W CTS2Q06350 511 aa2.49□□□□□ -2.01
SIN3YOL004W YPR174CQ06616 221 aaPredicted RBP2.49□□□□□ -2.01
SIN3YOL004W RTR2Q12378 196 aa2.49□□□□□ -2.01
SIN3YOL004W NPC2Q12408 173 aa2.49□□□□□ -2.01
SIN3YOL004W MEK1P24719 497 aaPredicted RBP2.49□□□□□ -2.01
SIN3YOL004W SWD2P36104 329 aaPredicted RBP2.49□□□□□ -2.01
SIN3YOL004W AIM29P36154 155 aa2.49□□□□□ -2.01
SIN3YOL004W MNN2P38069 597 aa2.49□□□□□ -2.01
SIN3YOL004W YBR241CP38142 488 aa2.49□□□□□ -2.01
SIN3YOL004W INM1P38710 295 aa2.49□□□□□ -2.01
SIN3YOL004W RIF1P29539 1916 aa2.49□□□□□ -2.01
SIN3YOL004W CDC33P07260 213 aaKnown RBP2.49□□□□□ -2.01
SIN3YOL004W CNE1P27825 502 aa2.49□□□□□ -2.01
SIN3YOL004W IDH1P28834 360 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SIN3YOL004W APE2P32454 952 aaKnown RBP2.49□□□□□ -2.01
SIN3YOL004W FZO1P38297 855 aa2.49□□□□□ -2.01
SIN3YOL004W TFG2P41896 400 aaPredicted RBP2.49□□□□□ -2.01
SIN3YOL004W YNL140CP53910 189 aa2.49□□□□□ -2.01
SIN3YOL004W SPP2Q02521 185 aa2.49□□□□□ -2.01
SIN3YOL004W YMR209CQ03648 457 aa2.49□□□□□ -2.01
SIN3YOL004W COQ11Q05892 277 aa2.49□□□□□ -2.01
SIN3YOL004W ARO10Q06408 635 aa2.49□□□□□ -2.01
SIN3YOL004W RKI1Q12189 258 aa2.49□□□□□ -2.01
SIN3YOL004W MATALPHA2P0CY08 210 aa2.48□□□□□ -2.01
SIN3YOL004W HMLALPHA2P0CY09 210 aa2.48□□□□□ -2.01
SIN3YOL004W FBA1P14540 359 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W RAD57P25301 460 aa2.48□□□□□ -2.01
SIN3YOL004W CHA1P25379 360 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W EMP70P32802 667 aa2.48□□□□□ -2.01
SIN3YOL004W CLB6P32943 380 aa2.48□□□□□ -2.01
SIN3YOL004W YGL185CP53100 379 aa2.48□□□□□ -2.01
SIN3YOL004W ATG4P53867 494 aa2.48□□□□□ -2.01
SIN3YOL004W RSM23Q01163 450 aa2.48□□□□□ -2.01
SIN3YOL004W ARR3Q06598 404 aa2.48□□□□□ -2.01
SIN3YOL004W PFA4Q12006 378 aa2.48□□□□□ -2.01
SIN3YOL004W TRP3P00937 484 aa2.48□□□□□ -2.01
SIN3YOL004W AAC1P04710 309 aa2.48□□□□□ -2.01
SIN3YOL004W RPL18AP0CX49 186 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W RPL18BP0CX50 186 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W ZRC1P20107 442 aa2.48□□□□□ -2.01
SIN3YOL004W HXT1P32465 570 aa2.48□□□□□ -2.01
SIN3YOL004W YKL187CP34231 750 aa2.48□□□□□ -2.01
SIN3YOL004W VBA2P38358 474 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W PCL6P40038 420 aa2.48□□□□□ -2.01
SIN3YOL004W THO1P40040 218 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W YER079WP40052 210 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W GAB1P41733 394 aa2.48□□□□□ -2.01
SIN3YOL004W YJR149WP47177 404 aa2.48□□□□□ -2.01
SIN3YOL004W SIP18P50263 79 aa2.48□□□□□ -2.01
SIN3YOL004W RIB4P50861 169 aaPredicted RBP2.48□□□□□ -2.01
SIN3YOL004W AVT4P50944 713 aa2.48□□□□□ -2.01
SIN3YOL004W YDR132CQ03900 495 aa2.48□□□□□ -2.01
SIN3YOL004W GPI17Q04080 534 aa2.48□□□□□ -2.01
SIN3YOL004W BI2P03873 423 aa2.48□□□□□ -2.01
SIN3YOL004W MSK1P32048 576 aa2.48□□□□□ -2.01
SIN3YOL004W ECM15P35195 104 aa2.48□□□□□ -2.01
SIN3YOL004W YOR062CP36025 268 aa2.48□□□□□ -2.01
SIN3YOL004W BNA4P38169 460 aa2.48□□□□□ -2.01
SIN3YOL004W YGL117WP53133 265 aa2.48□□□□□ -2.01
SIN3YOL004W BUD17P53727 317 aa2.48□□□□□ -2.01
SIN3YOL004W SPC2Q04969 178 aa2.48□□□□□ -2.01
SIN3YOL004W SDO1Q07953 250 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W AHA1Q12449 350 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W CMC4Q3E7A9 73 aa2.48□□□□□ -2.01
SIN3YOL004W ISN1Q99312 450 aa2.48□□□□□ -2.01
SIN3YOL004W CBF1P17106 351 aa2.48□□□□□ -2.01
SIN3YOL004W CAT2P32796 670 aaKnown RBP2.48□□□□□ -2.01
SIN3YOL004W ELF1P36053 145 aa2.48□□□□□ -2.01
SIN3YOL004W PEX7P39108 375 aa2.48□□□□□ -2.01
SIN3YOL004W ACO2P39533 789 aa2.48□□□□□ -2.01
SIN3YOL004W YPT11P48559 417 aa2.48□□□□□ -2.01
SIN3YOL004W BIO3P50277 480 aa2.48□□□□□ -2.01
SIN3YOL004W SHR3Q02774 210 aa2.48□□□□□ -2.01
SIN3YOL004W RCE1Q03530 315 aa2.48□□□□□ -2.01
SIN3YOL004W KRE28Q04431 385 aa2.48□□□□□ -2.01
SIN3YOL004W LDS2Q08218 356 aa2.48□□□□□ -2.01
SIN3YOL004W YDL009CQ12210 107 aa2.48□□□□□ -2.01
SIN3YOL004W ANB1P19211 157 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms