RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C PEX3P28795 441 aa3.58□□□□□ -1.84
CTF18YMR078C AST1P35183 429 aa3.58□□□□□ -1.84
CTF18YMR078C YFR045WP43617 309 aa3.58□□□□□ -1.84
CTF18YMR078C DXO1Q06349 442 aa3.58□□□□□ -1.84
CTF18YMR078C YOS9Q99220 542 aa3.58□□□□□ -1.84
CTF18YMR078C DDI1P40087 428 aa3.58□□□□□ -1.84
CTF18YMR078C YOL107WQ12239 342 aa3.58□□□□□ -1.84
CTF18YMR078C RSR1P13856 272 aa3.57□□□□□ -1.84
CTF18YMR078C RRT12P25381 491 aa3.57□□□□□ -1.84
CTF18YMR078C CAT2P32796 670 aaKnown RBP3.57□□□□□ -1.84
CTF18YMR078C YIR035CP40579 254 aa3.57□□□□□ -1.84
CTF18YMR078C ATC1Q04005 294 aa3.57□□□□□ -1.84
CTF18YMR078C YPR195CQ06594 109 aa3.57□□□□□ -1.84
CTF18YMR078C YIL059CP40520 121 aa3.56□□□□□ -1.84
CTF18YMR078C MAL13P53338 473 aa3.56□□□□□ -1.84
CTF18YMR078C PER33Q12144 273 aa3.56□□□□□ -1.84
CTF18YMR078C OSM1P21375 501 aaKnown RBP3.56□□□□□ -1.84
CTF18YMR078C SMC2P38989 1170 aaKnown RBP3.56□□□□□ -1.84
CTF18YMR078C SWT21P53873 357 aaPredicted RBP3.56□□□□□ -1.84
CTF18YMR078C YNL095CP53932 642 aa3.56□□□□□ -1.84
CTF18YMR078C CTR3Q06686 241 aa3.56□□□□□ -1.84
CTF18YMR078C SME1Q12330 94 aaPredicted RBP3.56□□□□□ -1.84
CTF18YMR078C AI5_BETAQ9ZZX0 354 aa3.56□□□□□ -1.84
CTF18YMR078C CWP1P28319 239 aa3.55□□□□□ -1.84
CTF18YMR078C KRE6P32486 720 aa3.55□□□□□ -1.84
CTF18YMR078C HIS1P00498 297 aaKnown RBP3.55□□□□□ -1.84
CTF18YMR078C COS2P0CX12 379 aa3.55□□□□□ -1.84
CTF18YMR078C COS3P0CX13 379 aa3.55□□□□□ -1.84
CTF18YMR078C YAK1P14680 807 aa3.55□□□□□ -1.84
CTF18YMR078C COY1P34237 679 aa3.55□□□□□ -1.84
CTF18YMR078C BIG1P38813 335 aa3.55□□□□□ -1.84
CTF18YMR078C ALG11P53954 548 aaKnown RBP3.55□□□□□ -1.84
CTF18YMR078C RRN5Q02983 363 aa3.55□□□□□ -1.84
CTF18YMR078C PRM7Q12459 698 aa3.55□□□□□ -1.84
CTF18YMR078C VPS1P21576 704 aaKnown RBP3.54□□□□□ -1.84
CTF18YMR078C HMT1P38074 348 aa3.54□□□□□ -1.84
CTF18YMR078C IES3Q12345 250 aa3.54□□□□□ -1.84
CTF18YMR078C YMR316C-AI2HB70 103 aa3.54□□□□□ -1.84
CTF18YMR078C YNL134CP53912 376 aaKnown RBP3.54□□□□□ -1.84
CTF18YMR078C YPL039WQ03080 316 aa3.54□□□□□ -1.84
CTF18YMR078C NNT1Q05874 261 aa3.54□□□□□ -1.84
CTF18YMR078C RPL4AP10664 362 aaKnown RBP3.53□□□□□ -1.84
CTF18YMR078C ALK2P32789 676 aaPredicted RBP3.53□□□□□ -1.84
CTF18YMR078C MED8P38304 223 aa3.53□□□□□ -1.84
CTF18YMR078C YHL049CP38722 271 aa3.53□□□□□ -1.84
CTF18YMR078C SHC1P39000 512 aa3.53□□□□□ -1.84
CTF18YMR078C RPL4BP49626 362 aaKnown RBP3.53□□□□□ -1.84
CTF18YMR078C ADH6Q04894 360 aaKnown RBP3.53□□□□□ -1.84
CTF18YMR078C SDO1Q07953 250 aaKnown RBP3.53□□□□□ -1.84
CTF18YMR078C PRR2Q12310 699 aa3.53□□□□□ -1.84
CTF18YMR078C YBL112CQ3E7Y4 105 aa3.53□□□□□ -1.84
CTF18YMR078C STH1P32597 1359 aa3.53□□□□□ -1.84
CTF18YMR078C YOL163WP0CF20 169 aa3.52□□□□□ -1.85
CTF18YMR078C EHD3P28817 500 aa3.52□□□□□ -1.85
CTF18YMR078C CAM1P29547 415 aaKnown RBP3.52□□□□□ -1.85
CTF18YMR078C PRS2P38620 318 aaKnown RBP3.52□□□□□ -1.85
CTF18YMR078C ARN2P38724 620 aa3.52□□□□□ -1.85
CTF18YMR078C DSN1P40568 576 aa3.52□□□□□ -1.85
CTF18YMR078C TVP15Q03860 143 aa3.52□□□□□ -1.85
CTF18YMR078C YLR173WQ06247 608 aa3.52□□□□□ -1.85
CTF18YMR078C YPR063CQ12160 140 aa3.52□□□□□ -1.85
CTF18YMR078C DAL82P21705 255 aa3.52□□□□□ -1.85
CTF18YMR078C PRS4P38063 326 aaPredicted RBP3.52□□□□□ -1.85
CTF18YMR078C PHO89P38361 574 aa3.52□□□□□ -1.85
CTF18YMR078C ECM14P38836 430 aa3.52□□□□□ -1.85
CTF18YMR078C GLG2P47011 380 aa3.52□□□□□ -1.85
CTF18YMR078C YMR166CQ03829 368 aa3.52□□□□□ -1.85
CTF18YMR078C BTS1Q12051 335 aa3.52□□□□□ -1.85
CTF18YMR078C QRI5P32344 111 aa3.51□□□□□ -1.85
CTF18YMR078C ERG2P32352 222 aa3.51□□□□□ -1.85
CTF18YMR078C CSG2P35206 410 aa3.51□□□□□ -1.85
CTF18YMR078C HEK2P38199 381 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
CTF18YMR078C SMB1P40018 196 aaKnown RBP3.51□□□□□ -1.85
CTF18YMR078C TIM21P53220 239 aa3.51□□□□□ -1.85
CTF18YMR078C EBS1Q03466 884 aaKnown RBP3.51□□□□□ -1.85
CTF18YMR078C YOR029WQ12243 111 aa3.51□□□□□ -1.85
CTF18YMR078C RAD3P06839 778 aa3.51□□□□□ -1.85
CTF18YMR078C PAN1P32521 1480 aa3.51□□□□□ -1.85
CTF18YMR078C TRM7P38238 310 aaKnown RBP3.51□□□□□ -1.85
CTF18YMR078C ECO1P43605 281 aa3.51□□□□□ -1.85
CTF18YMR078C OST3P48439 350 aa3.51□□□□□ -1.85
CTF18YMR078C APJ1P53940 528 aa3.51□□□□□ -1.85
CTF18YMR078C YJR012CP47087 207 aa3.5□□□□□ -1.85
CTF18YMR078C TY3A-GQ12173 290 aa3.5□□□□□ -1.85
CTF18YMR078C TY3A-IQ99219 290 aa3.5□□□□□ -1.85
CTF18YMR078C TKL2P33315 681 aa3.5□□□□□ -1.85
CTF18YMR078C RPL10P41805 221 aaKnown RBP3.5□□□□□ -1.85
CTF18YMR078C ATG31Q12421 196 aa3.5□□□□□ -1.85
CTF18YMR078C MRX3P38172 270 aa3.49□□□□□ -1.85
CTF18YMR078C SPO73P40031 143 aa3.49□□□□□ -1.85
CTF18YMR078C BNA6P43619 295 aa3.49□□□□□ -1.85
CTF18YMR078C PLB3Q08108 686 aa3.49□□□□□ -1.85
CTF18YMR078C IME2P32581 645 aa3.48□□□□□ -1.85
CTF18YMR078C RPE1P46969 238 aa3.48□□□□□ -1.85
CTF18YMR078C MRP1P10662 321 aaKnown RBP3.48□□□□□ -1.85
CTF18YMR078C YHR045WP38775 560 aa3.48□□□□□ -1.85
CTF18YMR078C SUR2P38992 349 aa3.48□□□□□ -1.85
CTF18YMR078C YER084WP40057 128 aa3.48□□□□□ -1.85
CTF18YMR078C CTF19Q02732 369 aa3.48□□□□□ -1.85
CTF18YMR078C ZWF1P11412 505 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms