RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C ABM1P47146 123 aa4.01□□□□□ -1.77
CCS1YMR038C DUO1P53168 247 aaKnown RBP4.01□□□□□ -1.77
CCS1YMR038C SRL2Q12020 392 aa4.01□□□□□ -1.77
CCS1YMR038C ATP6P00854 259 aa4□□□□□ -1.77
CCS1YMR038C HSP30P25619 332 aa4□□□□□ -1.77
CCS1YMR038C IST2P38250 946 aa4□□□□□ -1.77
CCS1YMR038C NOP16P40007 231 aaKnown RBP4□□□□□ -1.77
CCS1YMR038C YER121WP40076 114 aa4□□□□□ -1.77
CCS1YMR038C COG3P40094 801 aa4□□□□□ -1.77
CCS1YMR038C MET28P40573 187 aa4□□□□□ -1.77
CCS1YMR038C YIR020CP40575 100 aa4□□□□□ -1.77
CCS1YMR038C IAH1P41734 238 aa4□□□□□ -1.77
CCS1YMR038C TPS1Q00764 495 aaKnown RBP4□□□□□ -1.77
CCS1YMR038C SCS7Q03529 384 aa4□□□□□ -1.77
CCS1YMR038C SPO77Q06134 477 aa4□□□□□ -1.77
CCS1YMR038C NDL1Q06568 189 aa4□□□□□ -1.77
CCS1YMR038C MFG1Q07684 458 aa4□□□□□ -1.77
CCS1YMR038C IRC19Q07843 230 aa4□□□□□ -1.77
CCS1YMR038C GRC3Q07845 632 aa4□□□□□ -1.77
CCS1YMR038C RNH203Q12338 110 aa4□□□□□ -1.77
CCS1YMR038C YOR343CQ12484 108 aa4□□□□□ -1.77
CCS1YMR038C YBR126W-AQ8TGU7 68 aa4□□□□□ -1.77
CCS1YMR038C THP2O13539 261 aaKnown RBP3.99□□□□□ -1.77
CCS1YMR038C HNM1P19807 563 aa3.99□□□□□ -1.77
CCS1YMR038C DBP3P20447 523 aaKnown RBP3.99□□□□□ -1.77
CCS1YMR038C ITR2P30606 609 aa3.99□□□□□ -1.77
CCS1YMR038C TIM12P32830 109 aa3.99□□□□□ -1.77
CCS1YMR038C CHK1P38147 527 aa3.99□□□□□ -1.77
CCS1YMR038C ECM14P38836 430 aa3.99□□□□□ -1.77
CCS1YMR038C KRE29P40026 464 aa3.99□□□□□ -1.77
CCS1YMR038C YGR201CP42936 225 aa3.99□□□□□ -1.77
CCS1YMR038C BRR6P53062 197 aa3.99□□□□□ -1.77
CCS1YMR038C RBG2P53295 368 aaKnown RBP3.99□□□□□ -1.77
CCS1YMR038C CRZ1P53968 678 aa3.99□□□□□ -1.77
CCS1YMR038C SKO1Q02100 647 aa3.99□□□□□ -1.77
CCS1YMR038C MMT1Q03218 510 aa3.99□□□□□ -1.77
CCS1YMR038C RCE1Q03530 315 aa3.99□□□□□ -1.77
CCS1YMR038C YTH1Q06102 208 aaPredicted RBP3.99□□□□□ -1.77
CCS1YMR038C PIN3Q06449 215 aa3.99□□□□□ -1.77
CCS1YMR038C YPR202WQ08993 238 aa3.99□□□□□ -1.77
CCS1YMR038C RTR2Q12378 196 aa3.99□□□□□ -1.77
CCS1YMR038C MHF1Q3E835 90 aa3.99□□□□□ -1.77
CCS1YMR038C YPK2P18961 677 aa3.98□□□□□ -1.77
CCS1YMR038C YCR100CP25606 316 aa3.98□□□□□ -1.77
CCS1YMR038C POL4P25615 582 aa3.98□□□□□ -1.77
CCS1YMR038C DAL80P26343 269 aa3.98□□□□□ -1.77
CCS1YMR038C DEP1P31385 405 aa3.98□□□□□ -1.77
CCS1YMR038C ARC19P33204 171 aaKnown RBP3.98□□□□□ -1.77
CCS1YMR038C RFC3P38629 340 aa3.98□□□□□ -1.77
CCS1YMR038C YER084WP40057 128 aa3.98□□□□□ -1.77
CCS1YMR038C YIL029CP40538 142 aa3.98□□□□□ -1.77
CCS1YMR038C NAS2P40555 220 aa3.98□□□□□ -1.77
CCS1YMR038C NCA3P46955 337 aa3.98□□□□□ -1.77
CCS1YMR038C SIP18P50263 79 aa3.98□□□□□ -1.77
CCS1YMR038C USE1P53146 245 aa3.98□□□□□ -1.77
CCS1YMR038C MPC1P53157 130 aaKnown RBP3.98□□□□□ -1.77
CCS1YMR038C MRPL19P53875 158 aa3.98□□□□□ -1.77
CCS1YMR038C CIK1Q01649 594 aa3.98□□□□□ -1.77
CCS1YMR038C HSP31Q04432 237 aa3.98□□□□□ -1.77
CCS1YMR038C DPB4Q04603 196 aaKnown RBP3.98□□□□□ -1.77
CCS1YMR038C DYN3Q04949 312 aa3.98□□□□□ -1.77
CCS1YMR038C FMP42Q04991 504 aa3.98□□□□□ -1.77
CCS1YMR038C YPR147CQ06522 304 aaKnown RBP3.98□□□□□ -1.77
CCS1YMR038C NSL1Q12143 216 aa3.98□□□□□ -1.77
CCS1YMR038C RLM1Q12224 676 aa3.98□□□□□ -1.77
CCS1YMR038C HMS1Q12398 434 aa3.98□□□□□ -1.77
CCS1YMR038C YHR214C-EQ8TGK0 99 aa3.98□□□□□ -1.77
CCS1YMR038C GIT1P25346 518 aa3.97□□□□□ -1.77
CCS1YMR038C CSM1P25651 190 aa3.97□□□□□ -1.77
CCS1YMR038C GDH2P33327 1092 aaKnown RBP3.97□□□□□ -1.77
CCS1YMR038C ICS2P38284 255 aa3.97□□□□□ -1.77
CCS1YMR038C TRS85P46944 698 aa3.97□□□□□ -1.77
CCS1YMR038C NUP57P48837 541 aa3.97□□□□□ -1.77
CCS1YMR038C YNR062CP53748 327 aa3.97□□□□□ -1.77
CCS1YMR038C RSM23Q01163 450 aa3.97□□□□□ -1.77
CCS1YMR038C SED1Q01589 338 aa3.97□□□□□ -1.77
CCS1YMR038C YDR102CQ03864 110 aa3.97□□□□□ -1.77
CCS1YMR038C RNH202Q05635 350 aa3.97□□□□□ -1.77
CCS1YMR038C ATG38Q05789 226 aaKnown RBP3.97□□□□□ -1.77
CCS1YMR038C YLR281CQ05863 155 aa3.97□□□□□ -1.77
CCS1YMR038C LUC7Q07508 261 aaPredicted RBP3.97□□□□□ -1.77
CCS1YMR038C HRT1Q08273 121 aa3.97□□□□□ -1.77
CCS1YMR038C SKI7Q08491 747 aaPredicted RBP3.97□□□□□ -1.77
CCS1YMR038C NIP7Q08962 181 aaKnown RBP3.97□□□□□ -1.77
CCS1YMR038C RTN2Q12443 393 aa3.97□□□□□ -1.77
CCS1YMR038C PEP4P07267 405 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C RPS16AP0CX51 143 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C RPS16BP0CX52 143 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C MSI1P13712 422 aa3.96□□□□□ -1.78
CCS1YMR038C CDC23P16522 626 aa3.96□□□□□ -1.78
CCS1YMR038C UGA1P17649 471 aa3.96□□□□□ -1.78
CCS1YMR038C PET9P18239 318 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C EXG1P23776 448 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C RHB1P25378 209 aa3.96□□□□□ -1.78
CCS1YMR038C RPN2P32565 945 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C HCS1P34243 683 aa3.96□□□□□ -1.78
CCS1YMR038C ISC1P40015 477 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C EGT2P42835 1041 aa3.96□□□□□ -1.78
CCS1YMR038C GCN20P43535 752 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C ATG27P46989 271 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms