RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C ERD1P16151 362 aa4.01□□□□□ -1.77
CDC42YLR229C FUR1P18562 216 aaKnown RBP4.01□□□□□ -1.77
CDC42YLR229C PRP2P20095 876 aaPredicted RBP4.01□□□□□ -1.77
CDC42YLR229C ZRC1P20107 442 aa4.01□□□□□ -1.77
CDC42YLR229C APN1P22936 367 aa4.01□□□□□ -1.77
CDC42YLR229C MRP17P28778 131 aa4.01□□□□□ -1.77
CDC42YLR229C SSH4P32343 579 aa4.01□□□□□ -1.77
CDC42YLR229C DOA4P32571 926 aa4.01□□□□□ -1.77
CDC42YLR229C TUL1P36096 758 aa4.01□□□□□ -1.77
CDC42YLR229C TCD2P36101 447 aaKnown RBP4.01□□□□□ -1.77
CDC42YLR229C SHG1P38337 142 aa4.01□□□□□ -1.77
CDC42YLR229C HTD2P38790 280 aaKnown RBP4.01□□□□□ -1.77
CDC42YLR229C ARO9P38840 513 aaPredicted RBP4.01□□□□□ -1.77
CDC42YLR229C YAL037WP39728 267 aa4.01□□□□□ -1.77
CDC42YLR229C SNM1P40993 198 aa4.01□□□□□ -1.77
CDC42YLR229C ZIM17P42844 174 aa4.01□□□□□ -1.77
CDC42YLR229C SNN1P48232 102 aa4.01□□□□□ -1.77
CDC42YLR229C PMT5P52867 743 aa4.01□□□□□ -1.77
CDC42YLR229C HOS2P53096 452 aaPredicted RBP4.01□□□□□ -1.77
CDC42YLR229C FHN1P53279 174 aa4.01□□□□□ -1.77
CDC42YLR229C YGR151CP53287 111 aa4.01□□□□□ -1.77
CDC42YLR229C OKP1P53298 406 aa4.01□□□□□ -1.77
CDC42YLR229C YGR250CP53316 781 aaKnown RBP4.01□□□□□ -1.77
CDC42YLR229C PAU12P53343 120 aa4.01□□□□□ -1.77
CDC42YLR229C ATG4P53867 494 aa4.01□□□□□ -1.77
CDC42YLR229C RHO3Q00245 231 aaKnown RBP4.01□□□□□ -1.77
CDC42YLR229C VBA1Q04301 562 aa4.01□□□□□ -1.77
CDC42YLR229C YMR310CQ04867 317 aaPredicted RBP4.01□□□□□ -1.77
CDC42YLR229C MDM30Q05930 598 aa4.01□□□□□ -1.77
CDC42YLR229C BOP2Q06150 570 aa4.01□□□□□ -1.77
CDC42YLR229C YPR172WQ06608 200 aa4.01□□□□□ -1.77
CDC42YLR229C YPD1Q07688 167 aa4.01□□□□□ -1.77
CDC42YLR229C DCI1Q08558 271 aa4.01□□□□□ -1.77
CDC42YLR229C SRO7Q12038 1033 aa4.01□□□□□ -1.77
CDC42YLR229C YPR022CQ12139 1133 aa4.01□□□□□ -1.77
CDC42YLR229C YPR063CQ12160 140 aa4.01□□□□□ -1.77
CDC42YLR229C YLR099W-AQ3E798 87 aa4.01□□□□□ -1.77
CDC42YLR229C PCC1Q3E833 88 aa4.01□□□□□ -1.77
CDC42YLR229C YDR034W-BQ6Q5X2 51 aa4.01□□□□□ -1.77
CDC42YLR229C GAL1P04385 528 aa4□□□□□ -1.77
CDC42YLR229C RPS18AP0CX55 146 aaKnown RBP4□□□□□ -1.77
CDC42YLR229C RPS18BP0CX56 146 aaPredicted RBP4□□□□□ -1.77
CDC42YLR229C PPH21P23594 369 aa4□□□□□ -1.77
CDC42YLR229C STE50P25344 346 aa4□□□□□ -1.77
CDC42YLR229C BUB3P26449 341 aa4□□□□□ -1.77
CDC42YLR229C FUN26P31381 517 aa4□□□□□ -1.77
CDC42YLR229C MCM10P32354 571 aa4□□□□□ -1.77
CDC42YLR229C CDC13P32797 924 aaKnown RBP4□□□□□ -1.77
CDC42YLR229C VPS17P32913 551 aa4□□□□□ -1.77
CDC42YLR229C MTH1P35198 433 aa4□□□□□ -1.77
CDC42YLR229C OAR1P35731 278 aa4□□□□□ -1.77
CDC42YLR229C DOA1P36037 715 aa4□□□□□ -1.77
CDC42YLR229C PAU24P38155 120 aa4□□□□□ -1.77
CDC42YLR229C PEX32P38292 413 aa4□□□□□ -1.77
CDC42YLR229C PRS3P38689 320 aaKnown RBP4□□□□□ -1.77
CDC42YLR229C BAT1P38891 393 aaKnown RBP4□□□□□ -1.77
CDC42YLR229C GCV3P39726 170 aaPredicted RBP4□□□□□ -1.77
CDC42YLR229C MRX5P47007 382 aa4□□□□□ -1.77
CDC42YLR229C NUP57P48837 541 aa4□□□□□ -1.77
CDC42YLR229C YGL101WP53144 215 aa4□□□□□ -1.77
CDC42YLR229C SYF2P53277 215 aaPredicted RBP4□□□□□ -1.77
CDC42YLR229C SMX3P54999 86 aaPredicted RBP4□□□□□ -1.77
CDC42YLR229C RHO4Q00246 291 aa4□□□□□ -1.77
CDC42YLR229C MSS11Q03825 758 aa4□□□□□ -1.77
CDC42YLR229C ELP6Q04868 273 aa4□□□□□ -1.77
CDC42YLR229C RSF1Q05043 376 aa4□□□□□ -1.77
CDC42YLR229C RNH202Q05635 350 aa4□□□□□ -1.77
CDC42YLR229C PEX30Q06169 523 aa4□□□□□ -1.77
CDC42YLR229C YPR127WQ06494 345 aa4□□□□□ -1.77
CDC42YLR229C ANT1Q06497 328 aa4□□□□□ -1.77
CDC42YLR229C NOC4Q06512 552 aaPredicted RBP4□□□□□ -1.77
CDC42YLR229C RRI1Q12468 440 aa4□□□□□ -1.77
CDC42YLR229C FRE6Q12473 712 aa4□□□□□ -1.77
CDC42YLR229C SKS1Q12505 502 aa4□□□□□ -1.77
CDC42YLR229C PNO1Q99216 274 aaKnown RBP4□□□□□ -1.77
CDC42YLR229C MEX67Q99257 599 aaKnown RBP4□□□□□ -1.77
CDC42YLR229C TAO3P40468 2376 aa3.99□□□□□ -1.77
CDC42YLR229C AAC1P04710 309 aa3.99□□□□□ -1.77
CDC42YLR229C GAL7P08431 366 aa3.99□□□□□ -1.77
CDC42YLR229C YOL163WP0CF20 169 aa3.99□□□□□ -1.77
CDC42YLR229C MRP1P10662 321 aaKnown RBP3.99□□□□□ -1.77
CDC42YLR229C ARO3P14843 370 aaKnown RBP3.99□□□□□ -1.77
CDC42YLR229C AAC3P18238 307 aa3.99□□□□□ -1.77
CDC42YLR229C MGR1P25573 417 aa3.99□□□□□ -1.77
CDC42YLR229C YCR061WP25639 631 aa3.99□□□□□ -1.77
CDC42YLR229C PAU2P32612 120 aa3.99□□□□□ -1.77
CDC42YLR229C SUI1P32911 108 aaKnown RBP3.99□□□□□ -1.77
CDC42YLR229C ECT1P33412 323 aa3.99□□□□□ -1.77
CDC42YLR229C COS9P36034 407 aa3.99□□□□□ -1.77
CDC42YLR229C YKL162CP36052 402 aa3.99□□□□□ -1.77
CDC42YLR229C ELF1P36053 145 aa3.99□□□□□ -1.77
CDC42YLR229C FMP46P36141 133 aaKnown RBP3.99□□□□□ -1.77
CDC42YLR229C DTR1P38125 572 aa3.99□□□□□ -1.77
CDC42YLR229C ERV15P38312 142 aa3.99□□□□□ -1.77
CDC42YLR229C ASP1P38986 381 aaPredicted RBP3.99□□□□□ -1.77
CDC42YLR229C SMB1P40018 196 aaKnown RBP3.99□□□□□ -1.77
CDC42YLR229C TIF34P40217 347 aaKnown RBP3.99□□□□□ -1.77
CDC42YLR229C CIN1P40987 1014 aa3.99□□□□□ -1.77
CDC42YLR229C MCM22P47167 239 aa3.99□□□□□ -1.77
CDC42YLR229C BAT2P47176 376 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms