RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C WSC3Q12215 556 aa10.06□□□□□ -0.8
YKR040CYKR040C ENA5Q12691 1091 aa10.06□□□□□ -0.8
YKR040CYKR040C DSF1P0CX08 502 aa10.05□□□□□ -0.8
YKR040CYKR040C YNR073CP0CX09 502 aa10.05□□□□□ -0.8
YKR040CYKR040C SPT10P35208 640 aa10.05□□□□□ -0.8
YKR040CYKR040C PUG1P40100 303 aa10.05□□□□□ -0.8
YKR040CYKR040C SAM50P53969 484 aa10.05□□□□□ -0.8
YKR040CYKR040C YDR514CQ04408 483 aa10.05□□□□□ -0.8
YKR040CYKR040C SRL2Q12020 392 aa10.05□□□□□ -0.8
YKR040CYKR040C NAM2P11325 894 aa10.04□□□□□ -0.8
YKR040CYKR040C MDH1P17505 334 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
YKR040CYKR040C DAL80P26343 269 aa10.04□□□□□ -0.8
YKR040CYKR040C YKL107WP34251 309 aa10.04□□□□□ -0.8
YKR040CYKR040C FRM2P37261 193 aa10.04□□□□□ -0.8
YKR040CYKR040C THI2P38141 450 aa10.04□□□□□ -0.8
YKR040CYKR040C LSM4P40070 187 aaKnown RBP10.04□□□□□ -0.8
YKR040CYKR040C YOL114CQ12322 202 aa10.04□□□□□ -0.8
YKR040CYKR040C FUN26P31381 517 aa10.03□□□□□ -0.8
YKR040CYKR040C PUB1P32588 453 aaKnown RBP RIP-Chip data10.03□□□□□ -0.8not detected
YKR040CYKR040C GLC7P32598 312 aaKnown RBP10.03□□□□□ -0.8
YKR040CYKR040C TAT1P38085 619 aa10.03□□□□□ -0.8
YKR040CYKR040C ECM14P38836 430 aa10.03□□□□□ -0.8
YKR040CYKR040C FLX1P40464 311 aa10.03□□□□□ -0.8
YKR040CYKR040C YJL016WP47072 561 aa10.03□□□□□ -0.8
YKR040CYKR040C PXR1P53335 271 aaPredicted RBP10.03□□□□□ -0.8
YKR040CYKR040C SED1Q01589 338 aa10.03□□□□□ -0.8
YKR040CYKR040C RRS1Q08746 203 aaKnown RBP10.03□□□□□ -0.8
YKR040CYKR040C YPR1Q12458 312 aa10.03□□□□□ -0.8
YKR040CYKR040C Q0297Q9ZZV8 51 aa10.03□□□□□ -0.8
YKR040CYKR040C BPH1P25356 2167 aa10.02□□□□□ -0.8
YKR040CYKR040C TDH3P00359 332 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
YKR040CYKR040C MES1P00958 751 aaKnown RBP10.02□□□□□ -0.81
YKR040CYKR040C PAU12P53343 120 aa10.02□□□□□ -0.81
YKR040CYKR040C TEX1P53851 422 aaKnown RBP10.02□□□□□ -0.81
YKR040CYKR040C GAL83Q04739 417 aa10.02□□□□□ -0.81
YKR040CYKR040C MRX10Q05648 414 aa10.02□□□□□ -0.81
YKR040CYKR040C TSR2Q06672 205 aaKnown RBP10.02□□□□□ -0.81
YKR040CYKR040C YOR238WQ08634 303 aa10.02□□□□□ -0.81
YKR040CYKR040C FRE5Q08908 694 aa10.02□□□□□ -0.81
YKR040CYKR040C SPO24Q3E752 67 aa10.02□□□□□ -0.81
YKR040CYKR040C SOD2P00447 233 aa10.01□□□□□ -0.81
YKR040CYKR040C RPS23AP0CX29 145 aaKnown RBP10.01□□□□□ -0.81
YKR040CYKR040C RPS23BP0CX30 145 aa10.01□□□□□ -0.81
YKR040CYKR040C MRT4P33201 236 aaKnown RBP10.01□□□□□ -0.81
YKR040CYKR040C MTC2P34246 357 aa10.01□□□□□ -0.81
YKR040CYKR040C YKR015CP36111 568 aa10.01□□□□□ -0.81
YKR040CYKR040C PEX32P38292 413 aa10.01□□□□□ -0.81
YKR040CYKR040C ARO9P38840 513 aaPredicted RBP10.01□□□□□ -0.81
YKR040CYKR040C NVJ1P38881 321 aa10.01□□□□□ -0.81
YKR040CYKR040C YIL012WP40551 113 aa10.01□□□□□ -0.81
YKR040CYKR040C CTK2P46962 323 aa10.01□□□□□ -0.81
YKR040CYKR040C GPI17Q04080 534 aa10.01□□□□□ -0.81
YKR040CYKR040C GAT3Q07928 141 aa10.01□□□□□ -0.81
YKR040CYKR040C FRE6Q12473 712 aa10.01□□□□□ -0.81
YKR040CYKR040C RPL6BP05739 176 aaKnown RBP10□□□□□ -0.81
YKR040CYKR040C VPS17P32913 551 aa10□□□□□ -0.81
YKR040CYKR040C GOS1P38736 223 aa10□□□□□ -0.81
YKR040CYKR040C SLS1P42900 643 aa10□□□□□ -0.81
YKR040CYKR040C PMT6P42934 759 aa10□□□□□ -0.81
YKR040CYKR040C NRK1P53915 240 aa10□□□□□ -0.81
YKR040CYKR040C YLR152CP54072 576 aa10□□□□□ -0.81
YKR040CYKR040C NEJ1Q06148 342 aa10□□□□□ -0.81
YKR040CYKR040C YPR196WQ06595 470 aa10□□□□□ -0.81
YKR040CYKR040C LUC7Q07508 261 aaPredicted RBP10□□□□□ -0.81
YKR040CYKR040C FRE3Q08905 711 aa10□□□□□ -0.81
YKR040CYKR040C RBD2Q12270 262 aa10□□□□□ -0.81
YKR040CYKR040C YOR097CQ12274 175 aaPredicted RBP10□□□□□ -0.81
YKR040CYKR040C ISA2Q12425 185 aa10□□□□□ -0.81
YKR040CYKR040C MET3P08536 511 aa9.99□□□□□ -0.81
YKR040CYKR040C ARO3P14843 370 aaKnown RBP9.99□□□□□ -0.81
YKR040CYKR040C DBP2P24783 546 aaKnown RBP9.99□□□□□ -0.81
YKR040CYKR040C VMA6P32366 345 aaKnown RBP9.99□□□□□ -0.81
YKR040CYKR040C YER121WP40076 114 aa9.99□□□□□ -0.81
YKR040CYKR040C DLS1P40366 167 aa9.99□□□□□ -0.81
YKR040CYKR040C YNR048WP53740 393 aa9.99□□□□□ -0.81
YKR040CYKR040C AAH1P53909 347 aa9.99□□□□□ -0.81
YKR040CYKR040C YMR252CQ04814 134 aa9.99□□□□□ -0.81
YKR040CYKR040C COX9P07255 59 aa9.98□□□□□ -0.81
YKR040CYKR040C MSI1P13712 422 aa9.98□□□□□ -0.81
YKR040CYKR040C DEG1P31115 442 aaKnown RBP9.98□□□□□ -0.81
YKR040CYKR040C MNS1P32906 549 aa9.98□□□□□ -0.81
YKR040CYKR040C MCH2P36032 473 aa9.98□□□□□ -0.81
YKR040CYKR040C PAU24P38155 120 aa9.98□□□□□ -0.81
YKR040CYKR040C YHL044WP38727 235 aa9.98□□□□□ -0.81
YKR040CYKR040C OST1P41543 476 aaKnown RBP9.98□□□□□ -0.81
YKR040CYKR040C EGT2P42835 1041 aa9.98□□□□□ -0.81
YKR040CYKR040C SBH2P52871 88 aa9.98□□□□□ -0.81
YKR040CYKR040C SLI1P53304 468 aa9.98□□□□□ -0.81
YKR040CYKR040C HHT1P61830 136 aa9.98□□□□□ -0.81
YKR040CYKR040C TMA20P89886 181 aaPredicted RBP9.98□□□□□ -0.81
YKR040CYKR040C YMR279CQ03263 540 aa9.98□□□□□ -0.81
YKR040CYKR040C MAK3Q03503 176 aa9.98□□□□□ -0.81
YKR040CYKR040C USB1Q12208 290 aaKnown RBP9.98□□□□□ -0.81
YKR040CYKR040C GEP5Q12393 293 aa9.98□□□□□ -0.81
YKR040CYKR040C FAT1P38225 669 aa9.97□□□□□ -0.81
YKR040CYKR040C ATF1P40353 525 aa9.97□□□□□ -0.81
YKR040CYKR040C PAM16P42949 149 aa9.97□□□□□ -0.81
YKR040CYKR040C YGL204CP53089 101 aa9.97□□□□□ -0.81
YKR040CYKR040C MTL1P53214 551 aa9.97□□□□□ -0.81
YKR040CYKR040C CIK1Q01649 594 aa9.97□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms