RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W CAM1P29547 415 aaKnown RBP4.06□□□□□ -1.76
SPC42YKL042W SRB4P32569 687 aa4.06□□□□□ -1.76
SPC42YKL042W ALK2P32789 676 aaPredicted RBP4.06□□□□□ -1.76
SPC42YKL042W MRX3P38172 270 aa4.06□□□□□ -1.76
SPC42YKL042W YER085CP40058 173 aa4.06□□□□□ -1.76
SPC42YKL042W COQ5P49017 307 aa4.06□□□□□ -1.76
SPC42YKL042W MRS2Q01926 470 aa4.06□□□□□ -1.76
SPC42YKL042W EBS1Q03466 884 aaKnown RBP4.06□□□□□ -1.76
SPC42YKL042W COX10P21592 462 aa4.05□□□□□ -1.76
SPC42YKL042W RNA15P25299 296 aaPredicted RBP4.05□□□□□ -1.76
SPC42YKL042W ASP1P38986 381 aaPredicted RBP4.05□□□□□ -1.76
SPC42YKL042W FRT2P39734 528 aa4.05□□□□□ -1.76
SPC42YKL042W YER184CP39961 794 aa4.05□□□□□ -1.76
SPC42YKL042W SWS2P53937 143 aa4.05□□□□□ -1.76
SPC42YKL042W MYO5Q04439 1219 aaKnown RBP4.05□□□□□ -1.76
SPC42YKL042W LOA1Q06508 300 aa4.05□□□□□ -1.76
SPC42YKL042W NOP1P15646 327 aaKnown RBP4.04□□□□□ -1.76
SPC42YKL042W RPB9P27999 122 aa4.04□□□□□ -1.76
SPC42YKL042W QRI5P32344 111 aa4.04□□□□□ -1.76
SPC42YKL042W KRE6P32486 720 aa4.04□□□□□ -1.76
SPC42YKL042W TCD1P38756 429 aa4.04□□□□□ -1.76
SPC42YKL042W BDH1P39714 382 aa4.04□□□□□ -1.76
SPC42YKL042W RTR1P40084 226 aaPredicted RBP4.04□□□□□ -1.76
SPC42YKL042W DSN1P40568 576 aa4.04□□□□□ -1.76
SPC42YKL042W NBP35P52920 328 aa4.04□□□□□ -1.76
SPC42YKL042W CAX4P53223 239 aa4.04□□□□□ -1.76
SPC42YKL042W YGR067CP53243 804 aa4.04□□□□□ -1.76
SPC42YKL042W ACT1P60010 375 aaKnown RBP4.04□□□□□ -1.76
SPC42YKL042W DIB1Q06819 143 aaPredicted RBP4.04□□□□□ -1.76
SPC42YKL042W SOD1P00445 154 aaKnown RBP4.03□□□□□ -1.76
SPC42YKL042W RPL4AP10664 362 aaKnown RBP4.03□□□□□ -1.76
SPC42YKL042W NTG1P31378 399 aa4.03□□□□□ -1.76
SPC42YKL042W CAT2P32796 670 aaKnown RBP4.03□□□□□ -1.76
SPC42YKL042W BMH2P34730 273 aaKnown RBP4.03□□□□□ -1.76
SPC42YKL042W RPL4BP49626 362 aaKnown RBP4.03□□□□□ -1.76
SPC42YKL042W SDC1Q03323 175 aa4.03□□□□□ -1.76
SPC42YKL042W KRE28Q04431 385 aa4.03□□□□□ -1.76
SPC42YKL042W MRX8Q05473 314 aa4.03□□□□□ -1.76
SPC42YKL042W YLR283WQ05867 314 aa4.03□□□□□ -1.76
SPC42YKL042W PIN3Q06449 215 aa4.03□□□□□ -1.76
SPC42YKL042W YDL144CQ07589 356 aa4.03□□□□□ -1.76
SPC42YKL042W YPL119C-AQ3E751 87 aa4.03□□□□□ -1.76
SPC42YKL042W AI5_BETAQ9ZZX0 354 aa4.03□□□□□ -1.76
SPC42YKL042W TDH2P00358 332 aaKnown RBP4.02□□□□□ -1.77
SPC42YKL042W CKA2P19454 339 aa4.02□□□□□ -1.77
SPC42YKL042W VPS3P23643 1011 aa4.02□□□□□ -1.77
SPC42YKL042W HEK2P38199 381 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SPC42YKL042W POP8P38208 133 aa4.02□□□□□ -1.77
SPC42YKL042W LDB7P38210 180 aa4.02□□□□□ -1.77
SPC42YKL042W MED8P38304 223 aa4.02□□□□□ -1.77
SPC42YKL042W SMB1P40018 196 aaKnown RBP4.02□□□□□ -1.77
SPC42YKL042W AVT6P40074 448 aa4.02□□□□□ -1.77
SPC42YKL042W GCN20P43535 752 aaKnown RBP4.02□□□□□ -1.77
SPC42YKL042W GLG2P47011 380 aa4.02□□□□□ -1.77
SPC42YKL042W FMP41P53889 259 aaKnown RBP4.02□□□□□ -1.77
SPC42YKL042W ASI3P53983 676 aa4.02□□□□□ -1.77
SPC42YKL042W GRX3Q03835 250 aa4.02□□□□□ -1.77
SPC42YKL042W CSM4Q08955 156 aa4.02□□□□□ -1.77
SPC42YKL042W YDL211CQ12121 372 aa4.02□□□□□ -1.77
SPC42YKL042W FUS3P16892 353 aaKnown RBP4.01□□□□□ -1.77
SPC42YKL042W PHO80P20052 293 aa4.01□□□□□ -1.77
SPC42YKL042W OSM1P21375 501 aaKnown RBP4.01□□□□□ -1.77
SPC42YKL042W MID2P36027 376 aa4.01□□□□□ -1.77
SPC42YKL042W CWC21Q03375 135 aaKnown RBP4.01□□□□□ -1.77
SPC42YKL042W ECM11Q04110 302 aa4.01□□□□□ -1.77
SPC42YKL042W MATALPHA1P0CY06 175 aa4□□□□□ -1.77
SPC42YKL042W HMLALPHA1P0CY07 175 aa4□□□□□ -1.77
SPC42YKL042W PHO89P38361 574 aa4□□□□□ -1.77
SPC42YKL042W BFR1P38934 470 aaKnown RBP RIP-Chip data4□□□□□ -1.77 RIP-Chip
SPC42YKL042W HSH155P49955 971 aaKnown RBP4□□□□□ -1.77
SPC42YKL042W USE1P53146 245 aa4□□□□□ -1.77
SPC42YKL042W YNL095CP53932 642 aa4□□□□□ -1.77
SPC42YKL042W PEX10Q05568 337 aa4□□□□□ -1.77
SPC42YKL042W SNF8Q12483 233 aa4□□□□□ -1.77
SPC42YKL042W TCP1P12612 559 aaKnown RBP3.99□□□□□ -1.77
SPC42YKL042W HOM6P31116 359 aaKnown RBP3.99□□□□□ -1.77
SPC42YKL042W JEN1P36035 616 aa3.99□□□□□ -1.77
SPC42YKL042W UFD1P53044 361 aa3.99□□□□□ -1.77
SPC42YKL042W FLC3P53121 802 aa3.99□□□□□ -1.77
SPC42YKL042W SWT21P53873 357 aaPredicted RBP3.99□□□□□ -1.77
SPC42YKL042W SMD1Q02260 146 aaPredicted RBP3.99□□□□□ -1.77
SPC42YKL042W CPT1P17898 393 aa3.98□□□□□ -1.77
SPC42YKL042W MSS2P40990 351 aa3.98□□□□□ -1.77
SPC42YKL042W OTU1P43558 301 aa3.98□□□□□ -1.77
SPC42YKL042W HOC1P47124 396 aa3.98□□□□□ -1.77
SPC42YKL042W NOP13P53883 403 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
SPC42YKL042W NNT1Q05874 261 aa3.98□□□□□ -1.77
SPC42YKL042W SGT2Q12118 346 aaKnown RBP3.98□□□□□ -1.77
SPC42YKL042W POX1P13711 748 aa3.97□□□□□ -1.77
SPC42YKL042W RPS5P26783 225 aaKnown RBP3.97□□□□□ -1.77
SPC42YKL042W ERG2P32352 222 aa3.97□□□□□ -1.77
SPC42YKL042W YHL049CP38722 271 aa3.97□□□□□ -1.77
SPC42YKL042W SYS1P41544 203 aa3.97□□□□□ -1.77
SPC42YKL042W SLX9P53251 210 aaPredicted RBP3.97□□□□□ -1.77
SPC42YKL042W YPR098CQ06089 161 aa3.97□□□□□ -1.77
SPC42YKL042W ATG17Q06410 417 aa3.97□□□□□ -1.77
SPC42YKL042W YHL044WP38727 235 aa3.96□□□□□ -1.78
SPC42YKL042W TRR2P38816 342 aa3.96□□□□□ -1.78
SPC42YKL042W RPE1P46969 238 aa3.96□□□□□ -1.78
SPC42YKL042W JHD2P47156 728 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms