RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C GCN1P33892 2672 aaKnown RBP2.27□□□□□ -2.05
CTK2YJL006C ILV1P00927 576 aaKnown RBP2.27□□□□□ -2.05
CTK2YJL006C GAL7P08431 366 aa2.27□□□□□ -2.05
CTK2YJL006C CUP1-1P0CX80 61 aa2.27□□□□□ -2.05
CTK2YJL006C CUP1-2P0CX81 61 aa2.27□□□□□ -2.05
CTK2YJL006C RSA4P25382 515 aaKnown RBP2.27□□□□□ -2.05
CTK2YJL006C PPQ1P32945 549 aa2.27□□□□□ -2.05
CTK2YJL006C SEN34P39707 275 aa2.27□□□□□ -2.05
CTK2YJL006C PCL7P40186 285 aa2.27□□□□□ -2.05
CTK2YJL006C YGL185CP53100 379 aa2.27□□□□□ -2.05
CTK2YJL006C COG7P53195 279 aa2.27□□□□□ -2.05
CTK2YJL006C RSM27P53305 110 aa2.27□□□□□ -2.05
CTK2YJL006C YLR413WQ06689 675 aa2.27□□□□□ -2.05
CTK2YJL006C ATG5Q12380 294 aa2.27□□□□□ -2.05
CTK2YJL006C VPS13Q07878 3144 aa2.27□□□□□ -2.05
CTK2YJL006C PET494P07390 489 aaPredicted RBP2.26□□□□□ -2.05
CTK2YJL006C FRS2P15625 503 aaKnown RBP2.26□□□□□ -2.05
CTK2YJL006C KRE1P17260 313 aa2.26□□□□□ -2.05
CTK2YJL006C COT1P32798 439 aa2.26□□□□□ -2.05
CTK2YJL006C TRM7P38238 310 aaKnown RBP2.26□□□□□ -2.05
CTK2YJL006C MIG2P53035 382 aa2.26□□□□□ -2.05
CTK2YJL006C SWT21P53873 357 aaPredicted RBP2.26□□□□□ -2.05
CTK2YJL006C ERV25P54837 211 aaKnown RBP2.26□□□□□ -2.05
CTK2YJL006C EGD1Q02642 157 aaKnown RBP2.26□□□□□ -2.05
CTK2YJL006C TIM22Q12328 207 aa2.26□□□□□ -2.05
CTK2YJL006C YPK9Q12697 1472 aa2.26□□□□□ -2.05
CTK2YJL006C ATG15P25641 520 aa2.25□□□□□ -2.05
CTK2YJL006C KRE6P32486 720 aa2.25□□□□□ -2.05
CTK2YJL006C UTR5P32630 166 aa2.25□□□□□ -2.05
CTK2YJL006C YKL070WP36087 169 aa2.25□□□□□ -2.05
CTK2YJL006C YER084WP40057 128 aa2.25□□□□□ -2.05
CTK2YJL006C CPD1P53314 239 aa2.25□□□□□ -2.05
CTK2YJL006C ALG9P53868 555 aaKnown RBP2.25□□□□□ -2.05
CTK2YJL006C YNL050CP53952 270 aa2.25□□□□□ -2.05
CTK2YJL006C YLL007CQ07799 665 aa2.25□□□□□ -2.05
CTK2YJL006C FEX1Q08913 375 aa2.25□□□□□ -2.05
CTK2YJL006C FEX2Q08991 375 aa2.25□□□□□ -2.05
CTK2YJL006C MRPL23Q12487 163 aaPredicted RBP2.25□□□□□ -2.05
CTK2YJL006C RPC40P07703 335 aaKnown RBP2.24□□□□□ -2.05
CTK2YJL006C ZWF1P11412 505 aaKnown RBP2.24□□□□□ -2.05
CTK2YJL006C ICL1P28240 557 aaPredicted RBP2.24□□□□□ -2.05
CTK2YJL006C CAT2P32796 670 aaKnown RBP2.24□□□□□ -2.05
CTK2YJL006C CAB3P36076 571 aa2.24□□□□□ -2.05
CTK2YJL006C YKR032WP36127 104 aa2.24□□□□□ -2.05
CTK2YJL006C POP8P38208 133 aa2.24□□□□□ -2.05
CTK2YJL006C SPL2P38839 148 aa2.24□□□□□ -2.05
CTK2YJL006C SUR2P38992 349 aa2.24□□□□□ -2.05
CTK2YJL006C IBA57P47158 497 aa2.24□□□□□ -2.05
CTK2YJL006C OST3P48439 350 aa2.24□□□□□ -2.05
CTK2YJL006C GPI8P49018 411 aa2.24□□□□□ -2.05
CTK2YJL006C MND1P53102 219 aa2.24□□□□□ -2.05
CTK2YJL006C VPS60Q03390 229 aa2.24□□□□□ -2.05
CTK2YJL006C CHD1P32657 1468 aa2.24□□□□□ -2.05
CTK2YJL006C DNF3Q12674 1656 aa2.24□□□□□ -2.05
CTK2YJL006C VPS15P22219 1454 aa2.23□□□□□ -2.05
CTK2YJL006C TDH1P00360 332 aaKnown RBP2.23□□□□□ -2.05
CTK2YJL006C HIS3P06633 220 aa2.23□□□□□ -2.05
CTK2YJL006C YSR3P23501 404 aa2.23□□□□□ -2.05
CTK2YJL006C PHO89P38361 574 aa2.23□□□□□ -2.05
CTK2YJL006C RPE1P46969 238 aa2.23□□□□□ -2.05
CTK2YJL006C VBA1Q04301 562 aa2.23□□□□□ -2.05
CTK2YJL006C LOA1Q06508 300 aa2.23□□□□□ -2.05
CTK2YJL006C CLP1Q08685 445 aaPredicted RBP2.23□□□□□ -2.05
CTK2YJL006C FMP16Q12497 93 aa2.23□□□□□ -2.05
CTK2YJL006C PDR10P51533 1564 aa2.23□□□□□ -2.05
CTK2YJL006C UTP20P35194 2493 aaKnown RBP2.23□□□□□ -2.05
CTK2YJL006C ERG2P32352 222 aa2.22□□□□□ -2.05
CTK2YJL006C EBP2P36049 427 aaKnown RBP2.22□□□□□ -2.05
CTK2YJL006C YHI9P38765 294 aa2.22□□□□□ -2.05
CTK2YJL006C SCC4P40090 624 aa2.22□□□□□ -2.05
CTK2YJL006C MEP1P40260 492 aa2.22□□□□□ -2.05
CTK2YJL006C FMP33P46998 180 aa2.22□□□□□ -2.05
CTK2YJL006C MRX5P47007 382 aa2.22□□□□□ -2.05
CTK2YJL006C PEX31P53203 462 aa2.22□□□□□ -2.05
CTK2YJL006C TRM44Q02648 567 aaKnown RBP2.22□□□□□ -2.05
CTK2YJL006C PRP8P33334 2413 aaKnown RBP2.22□□□□□ -2.05
CTK2YJL006C TY1B-BRQ12193 1756 aa2.21□□□□□ -2.06
CTK2YJL006C TY1B-GR3Q12316 1755 aa2.21□□□□□ -2.06
CTK2YJL006C TY1B-ORQ92393 1755 aa2.21□□□□□ -2.06
CTK2YJL006C YMR316C-AI2HB70 103 aa2.21□□□□□ -2.06
CTK2YJL006C YAL064W-BO13512 126 aa2.21□□□□□ -2.06
CTK2YJL006C RPS3P05750 240 aaKnown RBP2.21□□□□□ -2.06
CTK2YJL006C TOR2P32600 2474 aaKnown RBP2.21□□□□□ -2.06
CTK2YJL006C PEX18P38855 283 aa2.21□□□□□ -2.06
CTK2YJL006C LSB1P53281 241 aa2.21□□□□□ -2.06
CTK2YJL006C FMP41P53889 259 aaKnown RBP2.21□□□□□ -2.06
CTK2YJL006C YNL095CP53932 642 aa2.21□□□□□ -2.06
CTK2YJL006C SDC1Q03323 175 aa2.21□□□□□ -2.06
CTK2YJL006C MIX17Q03667 156 aa2.21□□□□□ -2.06
CTK2YJL006C SFH1Q06168 426 aa2.21□□□□□ -2.06
CTK2YJL006C SEC10Q06245 871 aa2.21□□□□□ -2.06
CTK2YJL006C YPL150WQ12152 901 aa2.21□□□□□ -2.06
CTK2YJL006C TRM732Q03496 1420 aa2.2□□□□□ -2.06
CTK2YJL006C SSA3P09435 649 aaKnown RBP2.2□□□□□ -2.06
CTK2YJL006C CAM1P29547 415 aaKnown RBP2.2□□□□□ -2.06
CTK2YJL006C CDC14Q00684 551 aa2.2□□□□□ -2.06
CTK2YJL006C SPP2Q02521 185 aa2.2□□□□□ -2.06
CTK2YJL006C TEL1P38110 2787 aa2.19□□□□□ -2.06
CTK2YJL006C PEX3P28795 441 aa2.19□□□□□ -2.06
CTK2YJL006C HMT1P38074 348 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms