RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W TIR3P40552 269 aa8.77□□□□□ -1.01
UBA4YHR111W PPT1P53043 513 aa8.77□□□□□ -1.01
UBA4YHR111W THP3Q12049 470 aaKnown RBP8.77□□□□□ -1.01
UBA4YHR111W SSZ1P38788 538 aaKnown RBP8.76□□□□□ -1.01
UBA4YHR111W PUG1P40100 303 aa8.76□□□□□ -1.01
UBA4YHR111W FLX1P40464 311 aa8.76□□□□□ -1.01
UBA4YHR111W MSS2P40990 351 aa8.76□□□□□ -1.01
UBA4YHR111W AAD14P42884 376 aa8.76□□□□□ -1.01
UBA4YHR111W SLS1P42900 643 aa8.76□□□□□ -1.01
UBA4YHR111W SAM50P53969 484 aa8.76□□□□□ -1.01
UBA4YHR111W YLR346CQ06139 101 aa8.76□□□□□ -1.01
UBA4YHR111W YLR173WQ06247 608 aa8.76□□□□□ -1.01
UBA4YHR111W RRS1Q08746 203 aaKnown RBP8.76□□□□□ -1.01
UBA4YHR111W TRM10Q12400 293 aa8.76□□□□□ -1.01
UBA4YHR111W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
UBA4YHR111W MED11Q99278 115 aa8.76□□□□□ -1.01
UBA4YHR111W MES1P00958 751 aaKnown RBP8.75□□□□□ -1.01
UBA4YHR111W PUT3P25502 979 aaPredicted RBP8.75□□□□□ -1.01
UBA4YHR111W BCK2P33306 851 aa8.75□□□□□ -1.01
UBA4YHR111W TIF3P34167 436 aaKnown RBP8.75□□□□□ -1.01
UBA4YHR111W SDS22P36047 338 aa8.75□□□□□ -1.01
UBA4YHR111W TAT1P38085 619 aa8.75□□□□□ -1.01
UBA4YHR111W PDS1P40316 373 aaPredicted RBP8.75□□□□□ -1.01
UBA4YHR111W CCC1P47818 322 aa8.75□□□□□ -1.01
UBA4YHR111W NOG1Q02892 647 aaKnown RBP8.75□□□□□ -1.01
UBA4YHR111W YMR279CQ03263 540 aa8.75□□□□□ -1.01
UBA4YHR111W RBS1Q05672 457 aaKnown RBP8.75□□□□□ -1.01
UBA4YHR111W GSH2Q08220 491 aa8.75□□□□□ -1.01
UBA4YHR111W GEP5Q12393 293 aa8.75□□□□□ -1.01
UBA4YHR111W URA2P07259 2214 aaKnown RBP8.74□□□□□ -1.01
UBA4YHR111W NAM2P11325 894 aa8.74□□□□□ -1.01
UBA4YHR111W MNS1P32906 549 aa8.74□□□□□ -1.01
UBA4YHR111W ANR2P36090 516 aaPredicted RBP8.74□□□□□ -1.01
UBA4YHR111W FRM2P37261 193 aa8.74□□□□□ -1.01
UBA4YHR111W BAP2P38084 609 aa8.74□□□□□ -1.01
UBA4YHR111W NTA1P40354 457 aa8.74□□□□□ -1.01
UBA4YHR111W EGT2P42835 1041 aa8.74□□□□□ -1.01
UBA4YHR111W SBH2P52871 88 aa8.74□□□□□ -1.01
UBA4YHR111W PXR1P53335 271 aaPredicted RBP8.74□□□□□ -1.01
UBA4YHR111W TDH3P00359 332 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
UBA4YHR111W RPL6BP05739 176 aaKnown RBP8.73□□□□□ -1.01
UBA4YHR111W MET3P08536 511 aa8.73□□□□□ -1.01
UBA4YHR111W ENA1P13587 1091 aa8.73□□□□□ -1.01
UBA4YHR111W MRT4P33201 236 aaKnown RBP8.73□□□□□ -1.01
UBA4YHR111W SHM2P37291 469 aaKnown RBP8.73□□□□□ -1.01
UBA4YHR111W THI2P38141 450 aa8.73□□□□□ -1.01
UBA4YHR111W PRE3P38624 215 aa8.73□□□□□ -1.01
UBA4YHR111W YER121WP40076 114 aa8.73□□□□□ -1.01
UBA4YHR111W FMC1P40491 155 aa8.73□□□□□ -1.01
UBA4YHR111W CTK2P46962 323 aa8.73□□□□□ -1.01
UBA4YHR111W YJL016WP47072 561 aa8.73□□□□□ -1.01
UBA4YHR111W ENA2Q01896 1091 aa8.73□□□□□ -1.01
UBA4YHR111W YDR514CQ04408 483 aa8.73□□□□□ -1.01
UBA4YHR111W GAL83Q04739 417 aa8.73□□□□□ -1.01
UBA4YHR111W YPR196WQ06595 470 aa8.73□□□□□ -1.01
UBA4YHR111W ENA5Q12691 1091 aa8.73□□□□□ -1.01
UBA4YHR111W ARO3P14843 370 aaKnown RBP8.72□□□□□ -1.01
UBA4YHR111W MDH1P17505 334 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
UBA4YHR111W PUB1P32588 453 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
UBA4YHR111W YHL044WP38727 235 aa8.72□□□□□ -1.01
UBA4YHR111W ARO9P38840 513 aaPredicted RBP8.72□□□□□ -1.01
UBA4YHR111W OST1P41543 476 aaKnown RBP8.72□□□□□ -1.01
UBA4YHR111W GPI17Q04080 534 aa8.72□□□□□ -1.01
UBA4YHR111W YOL114CQ12322 202 aa8.72□□□□□ -1.01
UBA4YHR111W FSH3Q99369 266 aa8.72□□□□□ -1.01
UBA4YHR111W SOD2P00447 233 aa8.71□□□□□ -1.02
UBA4YHR111W MCH2P36032 473 aa8.71□□□□□ -1.02
UBA4YHR111W YKR015CP36111 568 aa8.71□□□□□ -1.02
UBA4YHR111W PEX32P38292 413 aa8.71□□□□□ -1.02
UBA4YHR111W ATF1P40353 525 aa8.71□□□□□ -1.02
UBA4YHR111W PEF1P53238 335 aa8.71□□□□□ -1.02
UBA4YHR111W MSS11Q03825 758 aa8.71□□□□□ -1.02
UBA4YHR111W ISA2Q12425 185 aa8.71□□□□□ -1.02
UBA4YHR111W HNM1P19807 563 aa8.7□□□□□ -1.02
UBA4YHR111W DEG1P31115 442 aaKnown RBP8.7□□□□□ -1.02
UBA4YHR111W FAT1P38225 669 aa8.7□□□□□ -1.02
UBA4YHR111W GVP36P40531 326 aaKnown RBP8.7□□□□□ -1.02
UBA4YHR111W PMT6P42934 759 aa8.7□□□□□ -1.02
UBA4YHR111W TYW3P53177 273 aa8.7□□□□□ -1.02
UBA4YHR111W MTL1P53214 551 aa8.7□□□□□ -1.02
UBA4YHR111W PAU12P53343 120 aa8.7□□□□□ -1.02
UBA4YHR111W YNR048WP53740 393 aa8.7□□□□□ -1.02
UBA4YHR111W AAH1P53909 347 aa8.7□□□□□ -1.02
UBA4YHR111W HHT1P61830 136 aa8.7□□□□□ -1.02
UBA4YHR111W CIK1Q01649 594 aa8.7□□□□□ -1.02
UBA4YHR111W TSR2Q06672 205 aaKnown RBP8.7□□□□□ -1.02
UBA4YHR111W FRE5Q08908 694 aa8.7□□□□□ -1.02
UBA4YHR111W FRE6Q12473 712 aa8.7□□□□□ -1.02
UBA4YHR111W MET17P06106 444 aa8.69□□□□□ -1.02
UBA4YHR111W MSI1P13712 422 aa8.69□□□□□ -1.02
UBA4YHR111W FUN26P31381 517 aa8.69□□□□□ -1.02
UBA4YHR111W MTC2P34246 357 aa8.69□□□□□ -1.02
UBA4YHR111W AVT6P40074 448 aa8.69□□□□□ -1.02
UBA4YHR111W DLS1P40366 167 aa8.69□□□□□ -1.02
UBA4YHR111W YIR020CP40575 100 aa8.69□□□□□ -1.02
UBA4YHR111W GLR1P41921 483 aaKnown RBP8.69□□□□□ -1.02
UBA4YHR111W NCA3P46955 337 aa8.69□□□□□ -1.02
UBA4YHR111W NRK1P53915 240 aa8.69□□□□□ -1.02
UBA4YHR111W YNL046WP53956 172 aa8.69□□□□□ -1.02
UBA4YHR111W YLR152CP54072 576 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms