RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B NOP56Q12460 504 aaKnown RBP RIP-Chip data12.24□□□□□ -0.45not detected
YER088W-BYER088W-B DSF1P0CX08 502 aa12.23□□□□□ -0.45
YER088W-BYER088W-B YNR073CP0CX09 502 aa12.23□□□□□ -0.45
YER088W-BYER088W-B ANR2P36090 516 aaPredicted RBP12.23□□□□□ -0.45
YER088W-BYER088W-B PUG1P40100 303 aa12.23□□□□□ -0.45
YER088W-BYER088W-B SAM50P53969 484 aa12.23□□□□□ -0.45
YER088W-BYER088W-B PUB1P32588 453 aaKnown RBP RIP-Chip data12.22□□□□□ -0.45not detected
YER088W-BYER088W-B FRM2P37261 193 aa12.22□□□□□ -0.45
YER088W-BYER088W-B TAT1P38085 619 aa12.22□□□□□ -0.45
YER088W-BYER088W-B GOS1P38736 223 aa12.22□□□□□ -0.45
YER088W-BYER088W-B PAU12P53343 120 aa12.22□□□□□ -0.45
YER088W-BYER088W-B DMA2P53924 522 aa12.22□□□□□ -0.45
YER088W-BYER088W-B SED1Q01589 338 aa12.22□□□□□ -0.45
YER088W-BYER088W-B YDR514CQ04408 483 aa12.22□□□□□ -0.45
YER088W-BYER088W-B MRX10Q05648 414 aa12.22□□□□□ -0.45
YER088W-BYER088W-B WSC3Q12215 556 aa12.22□□□□□ -0.45
YER088W-BYER088W-B MES1P00958 751 aaKnown RBP12.21□□□□□ -0.45
YER088W-BYER088W-B DAL80P26343 269 aa12.21□□□□□ -0.45
YER088W-BYER088W-B GLC7P32598 312 aaKnown RBP12.21□□□□□ -0.45
YER088W-BYER088W-B SPC29P33419 253 aa12.21□□□□□ -0.45
YER088W-BYER088W-B PEX32P38292 413 aa12.21□□□□□ -0.45
YER088W-BYER088W-B FLX1P40464 311 aa12.21□□□□□ -0.45
YER088W-BYER088W-B LAP3Q01532 483 aaKnown RBP RIP-Chip data12.21□□□□□ -0.45not detected
YER088W-BYER088W-B GAT3Q07928 141 aa12.21□□□□□ -0.45
YER088W-BYER088W-B FRE6Q12473 712 aa12.21□□□□□ -0.45
YER088W-BYER088W-B FUN26P31381 517 aa12.2□□□□□ -0.46
YER088W-BYER088W-B YKL107WP34251 309 aa12.2□□□□□ -0.46
YER088W-BYER088W-B RSM22P36056 628 aa12.2□□□□□ -0.46
YER088W-BYER088W-B ECM14P38836 430 aa12.2□□□□□ -0.46
YER088W-BYER088W-B PAM16P42949 149 aa12.2□□□□□ -0.46
YER088W-BYER088W-B CTK2P46962 323 aa12.2□□□□□ -0.46
YER088W-BYER088W-B PXR1P53335 271 aaPredicted RBP12.2□□□□□ -0.46
YER088W-BYER088W-B RRS1Q08746 203 aaKnown RBP12.2□□□□□ -0.46
YER088W-BYER088W-B RBD2Q12270 262 aa12.2□□□□□ -0.46
YER088W-BYER088W-B YPR1Q12458 312 aa12.2□□□□□ -0.46
YER088W-BYER088W-B Q0297Q9ZZV8 51 aa12.2□□□□□ -0.46
YER088W-BYER088W-B SOD2P00447 233 aa12.19□□□□□ -0.46
YER088W-BYER088W-B NAM2P11325 894 aa12.19□□□□□ -0.46
YER088W-BYER088W-B VMA6P32366 345 aaKnown RBP12.19□□□□□ -0.46
YER088W-BYER088W-B NAB2P32505 525 aaKnown RBP RIP-Chip data12.19□□□□□ -0.46not detected
YER088W-BYER088W-B MTC2P34246 357 aa12.19□□□□□ -0.46
YER088W-BYER088W-B NVJ1P38881 321 aa12.19□□□□□ -0.46
YER088W-BYER088W-B LSM4P40070 187 aaKnown RBP12.19□□□□□ -0.46
YER088W-BYER088W-B PMT6P42934 759 aa12.19□□□□□ -0.46
YER088W-BYER088W-B YJL016WP47072 561 aa12.19□□□□□ -0.46
YER088W-BYER088W-B GAL83Q04739 417 aa12.19□□□□□ -0.46
YER088W-BYER088W-B YMR252CQ04814 134 aa12.19□□□□□ -0.46
YER088W-BYER088W-B YOR238WQ08634 303 aa12.19□□□□□ -0.46
YER088W-BYER088W-B SRL2Q12020 392 aa12.19□□□□□ -0.46
YER088W-BYER088W-B TDH3P00359 332 aaKnown RBP RIP-Chip data12.18□□□□□ -0.46not detected
YER088W-BYER088W-B MRT4P33201 236 aaKnown RBP12.18□□□□□ -0.46
YER088W-BYER088W-B YKR015CP36111 568 aa12.18□□□□□ -0.46
YER088W-BYER088W-B GDS1P41913 522 aa12.18□□□□□ -0.46
YER088W-BYER088W-B SLS1P42900 643 aa12.18□□□□□ -0.46
YER088W-BYER088W-B MAK3Q03503 176 aa12.18□□□□□ -0.46
YER088W-BYER088W-B HLR1Q04429 423 aa12.18□□□□□ -0.46
YER088W-BYER088W-B NEJ1Q06148 342 aa12.18□□□□□ -0.46
YER088W-BYER088W-B TSR2Q06672 205 aaKnown RBP12.18□□□□□ -0.46
YER088W-BYER088W-B RPS23AP0CX29 145 aaKnown RBP12.17□□□□□ -0.46
YER088W-BYER088W-B RPS23BP0CX30 145 aa12.17□□□□□ -0.46
YER088W-BYER088W-B VPS17P32913 551 aa12.17□□□□□ -0.46
YER088W-BYER088W-B PAU24P38155 120 aa12.17□□□□□ -0.46
YER088W-BYER088W-B YIL012WP40551 113 aa12.17□□□□□ -0.46
YER088W-BYER088W-B TEX1P53851 422 aaKnown RBP12.17□□□□□ -0.46
YER088W-BYER088W-B YMR279CQ03263 540 aa12.17□□□□□ -0.46
YER088W-BYER088W-B ISA2Q12425 185 aa12.17□□□□□ -0.46
YER088W-BYER088W-B DBP2P24783 546 aaKnown RBP12.16□□□□□ -0.46
YER088W-BYER088W-B ATF1P40353 525 aa12.16□□□□□ -0.46
YER088W-BYER088W-B OST1P41543 476 aaKnown RBP12.16□□□□□ -0.46
YER088W-BYER088W-B AAH1P53909 347 aa12.16□□□□□ -0.46
YER088W-BYER088W-B YLR152CP54072 576 aa12.16□□□□□ -0.46
YER088W-BYER088W-B HHT1P61830 136 aa12.16□□□□□ -0.46
YER088W-BYER088W-B TMA20P89886 181 aaPredicted RBP12.16□□□□□ -0.46
YER088W-BYER088W-B GPI17Q04080 534 aa12.16□□□□□ -0.46
YER088W-BYER088W-B TY1A-NL1Q12391 440 aaKnown RBP12.16□□□□□ -0.46
YER088W-BYER088W-B COX9P07255 59 aa12.15□□□□□ -0.46
YER088W-BYER088W-B MET3P08536 511 aa12.15□□□□□ -0.46
YER088W-BYER088W-B ARO3P14843 370 aaKnown RBP12.15□□□□□ -0.46
YER088W-BYER088W-B DLS1P40366 167 aa12.15□□□□□ -0.46
YER088W-BYER088W-B EFM3P47163 339 aa12.15□□□□□ -0.46
YER088W-BYER088W-B LUC7Q07508 261 aaPredicted RBP12.15□□□□□ -0.46
YER088W-BYER088W-B FRE3Q08905 711 aa12.15□□□□□ -0.46
YER088W-BYER088W-B NKP1Q12493 238 aa12.15□□□□□ -0.46
YER088W-BYER088W-B RPL6BP05739 176 aaKnown RBP12.14□□□□□ -0.47
YER088W-BYER088W-B MRP1P10662 321 aaKnown RBP12.14□□□□□ -0.47
YER088W-BYER088W-B PRE7P23724 241 aaKnown RBP12.14□□□□□ -0.47
YER088W-BYER088W-B DEG1P31115 442 aaKnown RBP12.14□□□□□ -0.47
YER088W-BYER088W-B MCH2P36032 473 aa12.14□□□□□ -0.47
YER088W-BYER088W-B SDS24P38314 527 aa12.14□□□□□ -0.47
YER088W-BYER088W-B ARO9P38840 513 aaPredicted RBP12.14□□□□□ -0.47
YER088W-BYER088W-B EGT2P42835 1041 aa12.14□□□□□ -0.47
YER088W-BYER088W-B LYS20P48570 428 aaKnown RBP12.14□□□□□ -0.47
YER088W-BYER088W-B YNR048WP53740 393 aa12.14□□□□□ -0.47
YER088W-BYER088W-B NRK1P53915 240 aa12.14□□□□□ -0.47
YER088W-BYER088W-B PRP3Q03338 469 aaPredicted RBP12.14□□□□□ -0.47
YER088W-BYER088W-B MSS11Q03825 758 aa12.14□□□□□ -0.47
YER088W-BYER088W-B NMA1Q06178 401 aaKnown RBP12.14□□□□□ -0.47
YER088W-BYER088W-B YPR196WQ06595 470 aa12.14□□□□□ -0.47
YER088W-BYER088W-B LYS21Q12122 440 aaKnown RBP12.14□□□□□ -0.47
YER088W-BYER088W-B MSI1P13712 422 aa12.13□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 64 ms