RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeastyeast

Gene SKP1, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKP1YDR328C ADO1P47143 340 aaKnown RBP6.4□□□□□ -1.38
SKP1YDR328C LYS20P48570 428 aaKnown RBP6.4□□□□□ -1.38
SKP1YDR328C PXR1P53335 271 aaPredicted RBP6.4□□□□□ -1.38
SKP1YDR328C YNL165WP53891 406 aa6.4□□□□□ -1.38
SKP1YDR328C PLB2Q03674 706 aa6.4□□□□□ -1.38
SKP1YDR328C YLR352WQ06479 807 aa6.4□□□□□ -1.38
SKP1YDR328C ATG41Q12048 136 aa6.4□□□□□ -1.38
SKP1YDR328C LYS21Q12122 440 aaKnown RBP6.4□□□□□ -1.38
SKP1YDR328C ADK1P07170 222 aaKnown RBP6.39□□□□□ -1.39
SKP1YDR328C MATALPHA1P0CY06 175 aa6.39□□□□□ -1.39
SKP1YDR328C HMLALPHA1P0CY07 175 aa6.39□□□□□ -1.39
SKP1YDR328C PTC6P25646 442 aa6.39□□□□□ -1.39
SKP1YDR328C HOM6P31116 359 aaKnown RBP6.39□□□□□ -1.39
SKP1YDR328C PPG1P32838 368 aa6.39□□□□□ -1.39
SKP1YDR328C SPT10P35208 640 aa6.39□□□□□ -1.39
SKP1YDR328C MRPL39P36533 70 aa6.39□□□□□ -1.39
SKP1YDR328C YMR262WP38430 313 aa6.39□□□□□ -1.39
SKP1YDR328C IPI1P38803 334 aaPredicted RBP6.39□□□□□ -1.39
SKP1YDR328C MTC6P38849 526 aa6.39□□□□□ -1.39
SKP1YDR328C PTI1P39927 425 aaPredicted RBP6.39□□□□□ -1.39
SKP1YDR328C PUG1P40100 303 aa6.39□□□□□ -1.39
SKP1YDR328C DPB11P47027 764 aaPredicted RBP6.39□□□□□ -1.39
SKP1YDR328C IRC18P47056 224 aa6.39□□□□□ -1.39
SKP1YDR328C YJR120WP47157 116 aa6.39□□□□□ -1.39
SKP1YDR328C MTM1P53320 366 aa6.39□□□□□ -1.39
SKP1YDR328C ERV29P53337 310 aa6.39□□□□□ -1.39
SKP1YDR328C SAM50P53969 484 aa6.39□□□□□ -1.39
SKP1YDR328C YLR152CP54072 576 aa6.39□□□□□ -1.39
SKP1YDR328C SRP1Q02821 542 aaKnown RBP6.39□□□□□ -1.39
SKP1YDR328C YDL218WQ07629 317 aa6.39□□□□□ -1.39
SKP1YDR328C YDL180WQ12301 547 aa6.39□□□□□ -1.39
SKP1YDR328C RRI1Q12468 440 aa6.39□□□□□ -1.39
SKP1YDR328C CDC39P25655 2108 aaKnown RBP6.38□□□□□ -1.39
SKP1YDR328C PHO2P07269 559 aa6.38□□□□□ -1.39
SKP1YDR328C RPS16AP0CX51 143 aaKnown RBP6.38□□□□□ -1.39
SKP1YDR328C RPS16BP0CX52 143 aaKnown RBP6.38□□□□□ -1.39
SKP1YDR328C ITR1P30605 584 aa6.38□□□□□ -1.39
SKP1YDR328C NPL6P32832 435 aa6.38□□□□□ -1.39
SKP1YDR328C MKS1P34072 584 aa6.38□□□□□ -1.39
SKP1YDR328C FRM2P37261 193 aa6.38□□□□□ -1.39
SKP1YDR328C MSS4P38994 779 aa6.38□□□□□ -1.39
SKP1YDR328C MIT1P40002 666 aa6.38□□□□□ -1.39
SKP1YDR328C YJL055WP47044 245 aa6.38□□□□□ -1.39
SKP1YDR328C NIT3P49954 291 aa6.38□□□□□ -1.39
SKP1YDR328C HSV2P50079 448 aaPredicted RBP6.38□□□□□ -1.39
SKP1YDR328C RGC1Q06108 1083 aaKnown RBP6.38□□□□□ -1.39
SKP1YDR328C TPO3Q06451 622 aa6.38□□□□□ -1.39
SKP1YDR328C SSK1Q07084 712 aa6.38□□□□□ -1.39
SKP1YDR328C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
SKP1YDR328C IPP1P00817 287 aaKnown RBP6.37□□□□□ -1.39
SKP1YDR328C PRB1P09232 635 aa6.37□□□□□ -1.39
SKP1YDR328C PCL1P24867 279 aa6.37□□□□□ -1.39
SKP1YDR328C SED4P25365 1065 aa6.37□□□□□ -1.39
SKP1YDR328C TAT1P38085 619 aa6.37□□□□□ -1.39
SKP1YDR328C YBR096WP38256 230 aa6.37□□□□□ -1.39
SKP1YDR328C TIR3P40552 269 aa6.37□□□□□ -1.39
SKP1YDR328C AAD14P42884 376 aa6.37□□□□□ -1.39
SKP1YDR328C LOH1P47055 219 aa6.37□□□□□ -1.39
SKP1YDR328C ARO8P53090 500 aaKnown RBP6.37□□□□□ -1.39
SKP1YDR328C YIP4P53093 235 aa6.37□□□□□ -1.39
SKP1YDR328C MRP51Q02950 344 aa6.37□□□□□ -1.39
SKP1YDR328C YMR265CQ03508 461 aaKnown RBP6.37□□□□□ -1.39
SKP1YDR328C YDR387CQ04162 555 aa6.37□□□□□ -1.39
SKP1YDR328C PEX10Q05568 337 aa6.37□□□□□ -1.39
SKP1YDR328C FRE3Q08905 711 aa6.37□□□□□ -1.39
SKP1YDR328C YOR283WQ12040 230 aaKnown RBP6.37□□□□□ -1.39
SKP1YDR328C TGS1Q12052 315 aa6.37□□□□□ -1.39
SKP1YDR328C RTC5Q12108 567 aaKnown RBP6.37□□□□□ -1.39
SKP1YDR328C ORT1Q12375 292 aa6.37□□□□□ -1.39
SKP1YDR328C ATG15P25641 520 aa6.36□□□□□ -1.39
SKP1YDR328C CNE1P27825 502 aa6.36□□□□□ -1.39
SKP1YDR328C PRE4P30657 266 aa6.36□□□□□ -1.39
SKP1YDR328C DLS1P40366 167 aa6.36□□□□□ -1.39
SKP1YDR328C XBP1P40489 647 aa6.36□□□□□ -1.39
SKP1YDR328C SCY1P53009 804 aa6.36□□□□□ -1.39
SKP1YDR328C TPN1P53099 579 aa6.36□□□□□ -1.39
SKP1YDR328C AAH1P53909 347 aa6.36□□□□□ -1.39
SKP1YDR328C YAP6Q03935 383 aa6.36□□□□□ -1.39
SKP1YDR328C YMR130WQ04223 302 aa6.36□□□□□ -1.39
SKP1YDR328C PEX30Q06169 523 aa6.36□□□□□ -1.39
SKP1YDR328C ASR1Q06834 288 aa6.36□□□□□ -1.39
SKP1YDR328C RAF1Q06891 181 aa6.36□□□□□ -1.39
SKP1YDR328C YPL272CQ08984 517 aa6.36□□□□□ -1.39
SKP1YDR328C MCT1Q12283 360 aa6.36□□□□□ -1.39
SKP1YDR328C YLR358CO13565 187 aa6.35□□□□□ -1.39
SKP1YDR328C CYC1P00044 109 aaPredicted RBP6.35□□□□□ -1.39
SKP1YDR328C COX5BP00425 151 aa6.35□□□□□ -1.39
SKP1YDR328C CDC36P06100 191 aaPredicted RBP6.35□□□□□ -1.39
SKP1YDR328C CAP2P13517 287 aa6.35□□□□□ -1.39
SKP1YDR328C RCN1P36054 211 aa6.35□□□□□ -1.39
SKP1YDR328C HTD2P38790 280 aaKnown RBP6.35□□□□□ -1.39
SKP1YDR328C SMB1P40018 196 aaKnown RBP6.35□□□□□ -1.39
SKP1YDR328C BUD8P41698 603 aa6.35□□□□□ -1.39
SKP1YDR328C ERJ5P43613 295 aaPredicted RBP6.35□□□□□ -1.39
SKP1YDR328C RPA14P50106 137 aa6.35□□□□□ -1.39
SKP1YDR328C POP6P53218 158 aa6.35□□□□□ -1.39
SKP1YDR328C SLI1P53304 468 aa6.35□□□□□ -1.39
SKP1YDR328C TNA1P53322 534 aa6.35□□□□□ -1.39
SKP1YDR328C HHT1P61830 136 aa6.35□□□□□ -1.39
SKP1YDR328C YKR005CQ02203 525 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms