RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	MRPL51	Q06090	140 aa	Predicted RBP	5.48	□□□□□ -1.53
CDC1	YDR182W	CSI2	Q08054	341 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	YPR053C	Q6Q5F3	151 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	RPL39	P04650	51 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	DSF1	P0CX08	502 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	YNR073C	P0CX09	502 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	MSI1	P13712	422 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	SRP102	P36057	244 aa	Predicted RBP	5.47	□□□□□ -1.53
CDC1	YDR182W	YKR015C	P36111	568 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	YBR096W	P38256	230 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	CTR2	P38865	189 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	THO1	P40040	218 aa	Known RBP	5.47	□□□□□ -1.53
CDC1	YDR182W	ATF1	P40353	525 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	LOH1	P47055	219 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	RNH1	Q04740	348 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	YOR289W	Q12012	251 aa	Predicted RBP	5.47	□□□□□ -1.53
CDC1	YDR182W	YLR108C	Q12259	485 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	YCL048W-A	Q2V2Q2	79 aa		5.47	□□□□□ -1.53
CDC1	YDR182W	FBA1	P14540	359 aa	Known RBP	5.46	□□□□□ -1.53
CDC1	YDR182W	YAK1	P14680	807 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	SAM35	P14693	329 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	MEK1	P24719	497 aa	Predicted RBP	5.46	□□□□□ -1.53
CDC1	YDR182W	RPS5	P26783	225 aa	Known RBP	5.46	□□□□□ -1.53
CDC1	YDR182W	CLG1	P35190	452 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	YBR138C	P38277	524 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	TIR3	P40552	269 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	NQM1	P53228	333 aa	Predicted RBP	5.46	□□□□□ -1.53
CDC1	YDR182W	VOA1	P53262	265 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	DUG3	P53871	357 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	SNZ1	Q03148	297 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	YDR391C	Q04170	232 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	SMP3	Q04174	516 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	MLC2	Q06580	163 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	BRE4	Q07660	1125 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	LOT6	Q07923	191 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	RRS1	Q08746	203 aa	Known RBP	5.46	□□□□□ -1.53
CDC1	YDR182W	YDR215C	Q12240	137 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	RRI1	Q12468	440 aa		5.46	□□□□□ -1.53
CDC1	YDR182W	RPL6B	P05739	176 aa	Known RBP	5.45	□□□□□ -1.54
CDC1	YDR182W	TPK3	P05986	398 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	HNM1	P19807	563 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	DBF2	P22204	572 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	OST1	P41543	476 aa	Known RBP	5.45	□□□□□ -1.54
CDC1	YDR182W	SWP82	P43554	623 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	YHC3	P47040	408 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	AIM36	Q03798	255 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	SPC19	Q03954	165 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	GMC1	Q04399	608 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	TPO3	Q06451	622 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	RIB3	Q99258	208 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	PDE2	P06776	526 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	ARO3	P14843	370 aa	Known RBP	5.45	□□□□□ -1.54
CDC1	YDR182W	PHO80	P20052	293 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	OAC1	P32332	324 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	VMA11	P32842	164 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	YRB2	P40517	327 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	HIS6	P40545	261 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	BNA2	P47125	453 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	TYW3	P53177	273 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	SAY1	P53324	424 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	PXR1	P53335	271 aa	Predicted RBP	5.45	□□□□□ -1.54
CDC1	YDR182W	YNL046W	P53956	172 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	RSM23	Q01163	450 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	DIG2	Q03373	323 aa	Known RBP	5.45	□□□□□ -1.54
CDC1	YDR182W	MRX8	Q05473	314 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	AIM6	Q07716	390 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	YOR378W	Q08902	515 aa		5.45	□□□□□ -1.54
CDC1	YDR182W	MES1	P00958	751 aa	Known RBP	5.44	□□□□□ -1.54
CDC1	YDR182W	SCEI	P03882	235 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	YML003W	P0CF16	290 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	SUR1	P33300	382 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	MCH2	P36032	473 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	ECM8	P38246	354 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	SLM4	P38247	162 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	ARO9	P38840	513 aa	Predicted RBP	5.44	□□□□□ -1.54
CDC1	YDR182W	YER188W	P40103	239 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	CTK2	P46962	323 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	FMP33	P46998	180 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	YJL016W	P47072	561 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	COS10	P52924	374 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	APJ1	P53940	528 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	HOT1	Q03213	719 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	YMD8	Q03697	442 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	MSA1	Q08471	629 aa		5.44	□□□□□ -1.54
CDC1	YDR182W	TY1A-NL1	Q12391	440 aa	Known RBP	5.44	□□□□□ -1.54
CDC1	YDR182W	YER145C-A	A0A023PYF4	145 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	RPL15A	P05748	204 aa	Known RBP	5.43	□□□□□ -1.54
CDC1	YDR182W	MET3	P08536	511 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	AST1	P35183	429 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	BAP2	P38084	609 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	TAT1	P38085	619 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	IPT1	P38954	527 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	ABM1	P47146	123 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	ERP6	P53198	216 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	RPL15B	P54780	204 aa	Predicted RBP	5.43	□□□□□ -1.54
CDC1	YDR182W	GRX5	Q02784	150 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	YMR099C	Q03161	297 aa	Known RBP	5.43	□□□□□ -1.54
CDC1	YDR182W	YDR114C	Q04597	100 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	RIM9	Q04734	239 aa		5.43	□□□□□ -1.54
CDC1	YDR182W	YPR196W	Q06595	470 aa		5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms