RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 TAF6P53040 516 aa-0.09□□□□□ -2.42
snR49snR49 ECM18Q04623 453 aa-0.09□□□□□ -2.42
snR49snR49 BUR2Q05949 395 aa-0.09□□□□□ -2.42
snR49snR49 YEL009C-AA0A023PZF2 135 aa-0.1□□□□□ -2.43
snR49snR49 RPL2AP0CX45 254 aaKnown RBP-0.1□□□□□ -2.43
snR49snR49 RPL2BP0CX46 254 aaKnown RBP-0.1□□□□□ -2.43
snR49snR49 YBR219CP38317 127 aa-0.1□□□□□ -2.43
snR49snR49 VAB2P40003 282 aa-0.1□□□□□ -2.43
snR49snR49 BTT1P40314 149 aaPredicted RBP-0.1□□□□□ -2.43
snR49snR49 SNX4P47057 423 aa-0.1□□□□□ -2.43
snR49snR49 UTP6Q02354 440 aaKnown RBP-0.1□□□□□ -2.43
snR49snR49 YPL039WQ03080 316 aa-0.1□□□□□ -2.43
snR49snR49 CSI2Q08054 341 aa-0.1□□□□□ -2.43
snR49snR49 HSP82P02829 709 aaKnown RBP-0.11□□□□□ -2.43
snR49snR49 POX1P13711 748 aa-0.11□□□□□ -2.43
snR49snR49 IFM1P25038 676 aa-0.11□□□□□ -2.43
snR49snR49 FAA1P30624 700 aaKnown RBP-0.11□□□□□ -2.43
snR49snR49 PUP2P32379 260 aa-0.11□□□□□ -2.43
snR49snR49 JNM1P36224 373 aa-0.11□□□□□ -2.43
snR49snR49 SHC1P39000 512 aa-0.11□□□□□ -2.43
snR49snR49 AVT7P40501 490 aa-0.11□□□□□ -2.43
snR49snR49 YFL040WP43562 540 aa-0.11□□□□□ -2.43
snR49snR49 SNX41Q04053 625 aa-0.11□□□□□ -2.43
snR49snR49 PEX12Q04370 399 aa-0.11□□□□□ -2.43
snR49snR49 UBA1P22515 1024 aaKnown RBP-0.12□□□□□ -2.43
snR49snR49 YPT32P51996 222 aaKnown RBP-0.12□□□□□ -2.43
snR49snR49 RGS2Q99188 309 aa-0.12□□□□□ -2.43
snR49snR49 YLL053CP0CD98 152 aa-0.13□□□□□ -2.43
snR49snR49 SCL1P21243 252 aaKnown RBP-0.13□□□□□ -2.43
snR49snR49 BMH1P29311 267 aaKnown RBP-0.13□□□□□ -2.43
snR49snR49 ACB1P31787 87 aa-0.13□□□□□ -2.43
snR49snR49 MCH2P36032 473 aa-0.13□□□□□ -2.43
snR49snR49 SPT8P38915 602 aa-0.13□□□□□ -2.43
snR49snR49 YHB1P39676 399 aaKnown RBP-0.13□□□□□ -2.43
snR49snR49 UTP23Q12339 254 aaKnown RBP-0.13□□□□□ -2.43
snR49snR49 VAR1P02381 398 aa-0.14□□□□□ -2.43
snR49snR49 FBA1P14540 359 aaKnown RBP-0.14□□□□□ -2.43
snR49snR49 MDH2P22133 377 aa-0.14□□□□□ -2.43
snR49snR49 COT1P32798 439 aa-0.14□□□□□ -2.43
snR49snR49 PHO89P38361 574 aa-0.14□□□□□ -2.43
snR49snR49 CAJ1P39101 391 aa-0.14□□□□□ -2.43
snR49snR49 BMT5P40493 336 aa-0.14□□□□□ -2.43
snR49snR49 SPC19Q03954 165 aa-0.14□□□□□ -2.43
snR49snR49 RDS1P25611 832 aa-0.15□□□□□ -2.43
snR49snR49 IMP3P32899 183 aaPredicted RBP-0.15□□□□□ -2.43
snR49snR49 MDL1P33310 695 aa-0.15□□□□□ -2.43
snR49snR49 GDH2P33327 1092 aaKnown RBP-0.15□□□□□ -2.43
snR49snR49 POP8P38208 133 aa-0.15□□□□□ -2.43
snR49snR49 SHQ1P40486 507 aaPredicted RBP-0.15□□□□□ -2.43
snR49snR49 YJL055WP47044 245 aa-0.15□□□□□ -2.43
snR49snR49 AIM36Q03798 255 aa-0.15□□□□□ -2.43
snR49snR49 BUD21Q08492 214 aaPredicted RBP-0.15□□□□□ -2.43
snR49snR49 MHT1Q12525 324 aa-0.15□□□□□ -2.43
snR49snR49 SMC6Q12749 1114 aa-0.15□□□□□ -2.43
snR49snR49 CPA1P07258 411 aaKnown RBP-0.16□□□□□ -2.44
snR49snR49 DSF1P0CX08 502 aa-0.16□□□□□ -2.44
snR49snR49 YNR073CP0CX09 502 aa-0.16□□□□□ -2.44
snR49snR49 VMA5P31412 392 aaKnown RBP-0.16□□□□□ -2.44
snR49snR49 ERG2P32352 222 aa-0.16□□□□□ -2.44
snR49snR49 YPC1P38298 316 aa-0.16□□□□□ -2.44
snR49snR49 ALP1P38971 573 aa-0.16□□□□□ -2.44
snR49snR49 TAD2P47058 250 aa-0.16□□□□□ -2.44
snR49snR49 YGR016WP53209 190 aa-0.16□□□□□ -2.44
snR49snR49 IRC4Q03036 179 aa-0.16□□□□□ -2.44
snR49snR49 PRM15Q03262 622 aa-0.16□□□□□ -2.44
snR49snR49 RPL6BP05739 176 aaKnown RBP-0.17□□□□□ -2.44
snR49snR49 CCA1P21269 546 aa-0.17□□□□□ -2.44
snR49snR49 DPB2P24482 689 aaPredicted RBP-0.17□□□□□ -2.44
snR49snR49 VPH1P32563 840 aaKnown RBP-0.17□□□□□ -2.44
snR49snR49 PXA2P34230 853 aa-0.17□□□□□ -2.44
snR49snR49 UPS2P35200 230 aa-0.17□□□□□ -2.44
snR49snR49 TCD1P38756 429 aa-0.17□□□□□ -2.44
snR49snR49 YHR035WP38769 630 aa-0.17□□□□□ -2.44
snR49snR49 PRP39P39682 629 aaKnown RBP-0.17□□□□□ -2.44
snR49snR49 SEN34P39707 275 aa-0.17□□□□□ -2.44
snR49snR49 VTC1P40046 129 aaRIP-Chip data-0.17□□□□□ -2.44not detected
snR49snR49 PRM10P42946 383 aa-0.17□□□□□ -2.44
snR49snR49 UBC13P52490 153 aa-0.17□□□□□ -2.44
snR49snR49 RPL6AQ02326 176 aaKnown RBP-0.17□□□□□ -2.44
snR49snR49 RVB1Q03940 463 aaKnown RBP-0.17□□□□□ -2.44
snR49snR49 RIO1Q12196 484 aaKnown RBP-0.17□□□□□ -2.44
snR49snR49 GEP5Q12393 293 aa-0.17□□□□□ -2.44
snR49snR49 SPO24Q3E752 67 aa-0.17□□□□□ -2.44
snR49snR49 TFB5Q3E7C1 72 aaPredicted RBP-0.17□□□□□ -2.44
snR49snR49 SAS5Q99314 248 aa-0.17□□□□□ -2.44
snR49snR49 PEX4P29340 183 aa-0.18□□□□□ -2.44
snR49snR49 AEP1P32493 518 aa-0.18□□□□□ -2.44
snR49snR49 CSG2P35206 410 aa-0.18□□□□□ -2.44
snR49snR49 DRE2P36152 348 aa-0.18□□□□□ -2.44
snR49snR49 YSW1P38280 609 aa-0.18□□□□□ -2.44
snR49snR49 ARN2P38724 620 aa-0.18□□□□□ -2.44
snR49snR49 AVT2P39981 480 aa-0.18□□□□□ -2.44
snR49snR49 CYT2Q00873 224 aa-0.18□□□□□ -2.44
snR49snR49 YLR162WQ06235 118 aa-0.18□□□□□ -2.44
snR49snR49 VMA2P16140 517 aaKnown RBP-0.19□□□□□ -2.44
snR49snR49 RPL13BP40212 199 aaKnown RBP-0.19□□□□□ -2.44
snR49snR49 KEL2P50090 882 aa-0.19□□□□□ -2.44
snR49snR49 MDM34P53083 459 aa-0.19□□□□□ -2.44
snR49snR49 CTR3Q06686 241 aa-0.19□□□□□ -2.44
snR49snR49 RPL13AQ12690 199 aaPredicted RBP-0.19□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms