RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	OST6	Q03723	332 aa		2.36	□□□□□ -2.03
DBF20	YPR111W	INP2	Q03824	705 aa		2.36	□□□□□ -2.03
DBF20	YPR111W	GMC1	Q04399	608 aa		2.36	□□□□□ -2.03
DBF20	YPR111W	SFH1	Q06168	426 aa		2.36	□□□□□ -2.03
DBF20	YPR111W	PEX30	Q06169	523 aa		2.36	□□□□□ -2.03
DBF20	YPR111W	PER33	Q12144	273 aa		2.36	□□□□□ -2.03
DBF20	YPR111W	RPS3	P05750	240 aa	Known RBP	2.35	□□□□□ -2.03
DBF20	YPR111W	CMK2	P22517	447 aa		2.35	□□□□□ -2.03
DBF20	YPR111W	SPT4	P32914	102 aa	Predicted RBP	2.35	□□□□□ -2.03
DBF20	YPR111W	RFT1	P38206	574 aa	Predicted RBP	2.35	□□□□□ -2.03
DBF20	YPR111W	MIG3	P39943	394 aa		2.35	□□□□□ -2.03
DBF20	YPR111W	OXA1	P39952	402 aa		2.35	□□□□□ -2.03
DBF20	YPR111W	THO1	P40040	218 aa	Known RBP	2.35	□□□□□ -2.03
DBF20	YPR111W	HOC1	P47124	396 aa		2.35	□□□□□ -2.03
DBF20	YPR111W	TPC1	P53257	314 aa		2.35	□□□□□ -2.03
DBF20	YPR111W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.35	□□□□□ -2.03	not detected
DBF20	YPR111W	HAL1	Q01766	294 aa		2.35	□□□□□ -2.03
DBF20	YPR111W	ENT5	Q03769	411 aa	Known RBP	2.35	□□□□□ -2.03
DBF20	YPR111W	ATG38	Q05789	226 aa	Known RBP	2.35	□□□□□ -2.03
DBF20	YPR111W	YLR177W	Q06251	628 aa		2.35	□□□□□ -2.03
DBF20	YPR111W	YOR029W	Q12243	111 aa		2.35	□□□□□ -2.03
DBF20	YPR111W	TPI1	P00942	248 aa	Known RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	RPS14A	P06367	137 aa	Known RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	PET494	P07390	489 aa	Predicted RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	BGL2	P15703	313 aa	Known RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.34	□□□□□ -2.03	not detected
DBF20	YPR111W	MRPL20	P22354	195 aa	Predicted RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	POF1	P25576	258 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	PBN1	P25580	416 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	HOM6	P31116	359 aa	Known RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	VMA6	P32366	345 aa	Known RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	YHI9	P38765	294 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	RPS14B	P39516	138 aa	Known RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	COG7	P53195	279 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	MAL13	P53338	473 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	YNL040W	P53960	456 aa	Predicted RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	SEC13	Q04491	297 aa	Known RBP	2.34	□□□□□ -2.03
DBF20	YPR111W	DPP1	Q05521	289 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	CTR3	Q06686	241 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	YOR114W	Q12219	294 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	TRM10	Q12400	293 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	TFC7	Q12415	435 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	SEY1	Q99287	776 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	STH1	P32597	1359 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	CHD1	P32657	1468 aa		2.34	□□□□□ -2.03
DBF20	YPR111W	RPP0	P05317	312 aa	Known RBP	2.34	□□□□□ -2.04
DBF20	YPR111W	MRPL25	P23369	157 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	DPB2	P24482	689 aa	Predicted RBP	2.34	□□□□□ -2.04
DBF20	YPR111W	PPA2	P28239	310 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	IES6	P32617	166 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	VPS21	P36017	210 aa	Known RBP	2.34	□□□□□ -2.04
DBF20	YPR111W	LDB7	P38210	180 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	MBA1	P38300	278 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	SIP3	P38717	1229 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	PFS1	P38872	237 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	PET8	P38921	284 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	PEX22	P39718	180 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	COX15	P40086	486 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	YFL064C	P43540	174 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	YJR012C	P47087	207 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	NBP35	P52920	328 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	CDH1	P53197	566 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	SWS2	P53937	143 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	VPS60	Q03390	229 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	BNA7	Q04066	261 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	MYO5	Q04439	1219 aa	Known RBP	2.34	□□□□□ -2.04
DBF20	YPR111W	YOR376W	Q08900	122 aa		2.34	□□□□□ -2.04
DBF20	YPR111W	SOD1	P00445	154 aa	Known RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	ASP3-2	P0CX77	362 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	ASP3-3	P0CX78	362 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	ASP3-4	P0CX79	362 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	ASP3-1	P0CZ17	362 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	NHP6B	P11633	99 aa	Known RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	GPX1	P36014	167 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	YKL075C	P36083	450 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	FZO1	P38297	855 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	GGC1	P38988	300 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	TIM17	P39515	158 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	SMB1	P40018	196 aa	Known RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	PRE6	P40303	254 aa	Known RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	GLG2	P47011	380 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	PGU1	P47180	361 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	HSH155	P49955	971 aa	Known RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	NRM1	P53718	249 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	GIM3	P53900	129 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	SDC1	Q03323	175 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	VHS1	Q03785	461 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	TSA2	Q04120	196 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	YMR226C	Q05016	267 aa	Known RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	SSQ1	Q05931	657 aa	Predicted RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	ATG17	Q06410	417 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	TAZ1	Q06510	381 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	CFT1	Q06632	1357 aa	Known RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	DIB1	Q06819	143 aa	Predicted RBP	2.33	□□□□□ -2.04
DBF20	YPR111W	YOR292C	Q08743	309 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	MMT2	Q08970	484 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	YDR018C	Q12185	396 aa		2.33	□□□□□ -2.04
DBF20	YPR111W	SPS100	P13130	326 aa		2.32	□□□□□ -2.04
DBF20	YPR111W	COQ1	P18900	473 aa		2.32	□□□□□ -2.04
DBF20	YPR111W	CDC42	P19073	191 aa		2.32	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 169.7 ms