RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W FRE4P53746 719 aa3.69□□□□□ -1.82
SRO7YPR032W BNA5Q05979 453 aa3.69□□□□□ -1.82
SRO7YPR032W YLR346CQ06139 101 aa3.69□□□□□ -1.82
SRO7YPR032W MRX9Q07349 420 aaKnown RBP3.69□□□□□ -1.82
SRO7YPR032W CRD1Q07560 283 aa3.69□□□□□ -1.82
SRO7YPR032W PER33Q12144 273 aa3.69□□□□□ -1.82
SRO7YPR032W SNF8Q12483 233 aa3.69□□□□□ -1.82
SRO7YPR032W YPR096CO13587 100 aa3.68□□□□□ -1.82
SRO7YPR032W EXG1P23776 448 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W SLM5P25345 492 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W PUT3P25502 979 aaPredicted RBP3.68□□□□□ -1.82
SRO7YPR032W TRS65P32893 560 aa3.68□□□□□ -1.82
SRO7YPR032W ADD66P36040 267 aa3.68□□□□□ -1.82
SRO7YPR032W SHE2P36068 246 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SRO7YPR032W AIM3P38266 947 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W PFS1P38872 237 aa3.68□□□□□ -1.82
SRO7YPR032W CAT5P41735 233 aa3.68□□□□□ -1.82
SRO7YPR032W NUP42P49686 430 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W AVT4P50944 713 aa3.68□□□□□ -1.82
SRO7YPR032W MDM34P53083 459 aa3.68□□□□□ -1.82
SRO7YPR032W VPS73P53142 486 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W RTT103Q05543 409 aa3.68□□□□□ -1.82
SRO7YPR032W GRX8Q05926 109 aa3.68□□□□□ -1.82
SRO7YPR032W NOC4Q06512 552 aaPredicted RBP3.68□□□□□ -1.82
SRO7YPR032W LEA1Q08963 238 aaPredicted RBP3.68□□□□□ -1.82
SRO7YPR032W ICT1Q12385 394 aa3.68□□□□□ -1.82
SRO7YPR032W AHC1Q12433 566 aa3.68□□□□□ -1.82
SRO7YPR032W CDC9P04819 755 aa3.68□□□□□ -1.82
SRO7YPR032W PAU19P0CE85 124 aa3.68□□□□□ -1.82
SRO7YPR032W PAU21P0CE86 164 aa3.68□□□□□ -1.82
SRO7YPR032W PAU22P0CE87 164 aa3.68□□□□□ -1.82
SRO7YPR032W PDA1P16387 420 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W PAU3P25610 124 aa3.68□□□□□ -1.82
SRO7YPR032W SUA7P29055 345 aaPredicted RBP3.68□□□□□ -1.82
SRO7YPR032W LRP1P38801 184 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W CTF8P38877 133 aa3.68□□□□□ -1.82
SRO7YPR032W YGL114WP53134 725 aa3.68□□□□□ -1.82
SRO7YPR032W YGR017WP53210 297 aa3.68□□□□□ -1.82
SRO7YPR032W YVH1Q02256 364 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W MRP51Q02950 344 aa3.68□□□□□ -1.82
SRO7YPR032W DIG2Q03373 323 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W ELP6Q04868 273 aa3.68□□□□□ -1.82
SRO7YPR032W IPK1Q06667 281 aa3.68□□□□□ -1.82
SRO7YPR032W ILV5P06168 395 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W YPR170W-BP0C5R9 85 aa3.68□□□□□ -1.82
SRO7YPR032W YIH1P25637 258 aa3.68□□□□□ -1.82
SRO7YPR032W POP5P28005 173 aa3.68□□□□□ -1.82
SRO7YPR032W TCA17P32613 152 aa3.68□□□□□ -1.82
SRO7YPR032W CTF13P35203 478 aa3.68□□□□□ -1.82
SRO7YPR032W YKL069WP36088 180 aa3.68□□□□□ -1.82
SRO7YPR032W YER188WP40103 239 aa3.68□□□□□ -1.82
SRO7YPR032W ICE2P40499 491 aa3.68□□□□□ -1.82
SRO7YPR032W NEO1P40527 1151 aa3.68□□□□□ -1.82
SRO7YPR032W EMC5P40540 141 aa3.68□□□□□ -1.82
SRO7YPR032W GLC8P41818 229 aa3.68□□□□□ -1.82
SRO7YPR032W RPN11P43588 306 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W DLD2P46681 530 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W YJR056CP47115 236 aa3.68□□□□□ -1.82
SRO7YPR032W MRX6P48564 524 aa3.68□□□□□ -1.82
SRO7YPR032W YGR042WP53227 271 aa3.68□□□□□ -1.82
SRO7YPR032W SAM50P53969 484 aa3.68□□□□□ -1.82
SRO7YPR032W MZM1Q03429 123 aaPredicted RBP3.68□□□□□ -1.82
SRO7YPR032W TY1A-DR2Q03964 440 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W TY1A-MR1Q04215 440 aa3.68□□□□□ -1.82
SRO7YPR032W UTP15Q04305 513 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W YLR225CQ05948 407 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W TEN1Q07921 160 aa3.68□□□□□ -1.82
SRO7YPR032W SRL2Q12020 392 aa3.68□□□□□ -1.82
SRO7YPR032W TGL5Q12043 749 aa3.68□□□□□ -1.82
SRO7YPR032W PRS5Q12265 496 aaKnown RBP3.68□□□□□ -1.82
SRO7YPR032W TY1A-BLQ12266 440 aa3.68□□□□□ -1.82
SRO7YPR032W DED1P06634 604 aaKnown RBP3.67□□□□□ -1.82
SRO7YPR032W TY1A-HP0C2I4 478 aaKnown RBP3.67□□□□□ -1.82
SRO7YPR032W TY2A-LR1P0C2J4 438 aa3.67□□□□□ -1.82
SRO7YPR032W YFL068WP0CX99 160 aa3.67□□□□□ -1.82
SRO7YPR032W YLL066W-AP0CY00 160 aa3.67□□□□□ -1.82
SRO7YPR032W YLL067W-AP0CY01 160 aa3.67□□□□□ -1.82
SRO7YPR032W SIS1P25294 352 aaKnown RBP3.67□□□□□ -1.82
SRO7YPR032W BUD5P25300 642 aaPredicted RBP3.67□□□□□ -1.82
SRO7YPR032W TY2A-CP25383 438 aa3.67□□□□□ -1.82
SRO7YPR032W MET22P32179 357 aa3.67□□□□□ -1.82
SRO7YPR032W PUB1P32588 453 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SRO7YPR032W TCD2P36101 447 aaKnown RBP3.67□□□□□ -1.82
SRO7YPR032W OMA1P36163 345 aa3.67□□□□□ -1.82
SRO7YPR032W ARP1P38696 384 aa3.67□□□□□ -1.82
SRO7YPR032W POP2P39008 433 aa3.67□□□□□ -1.82
SRO7YPR032W SCD6P45978 349 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SRO7YPR032W NSA1P53136 463 aaPredicted RBP3.67□□□□□ -1.82
SRO7YPR032W TYW3P53177 273 aa3.67□□□□□ -1.82
SRO7YPR032W PNC1P53184 216 aaKnown RBP3.67□□□□□ -1.82
SRO7YPR032W SMX3P54999 86 aaPredicted RBP3.67□□□□□ -1.82
SRO7YPR032W TY2A-DR2Q03483 438 aa3.67□□□□□ -1.82
SRO7YPR032W YML096WQ04489 525 aa3.67□□□□□ -1.82
SRO7YPR032W BER1Q06688 274 aaKnown RBP3.67□□□□□ -1.82
SRO7YPR032W TY2A-BQ12260 438 aa3.67□□□□□ -1.82
SRO7YPR032W TY2A-OR2Q12293 438 aa3.67□□□□□ -1.82
SRO7YPR032W TY2A-DR1Q12392 438 aa3.67□□□□□ -1.82
SRO7YPR032W TY2A-OR1Q12439 438 aa3.67□□□□□ -1.82
SRO7YPR032W TY2A-DR3Q99303 438 aa3.67□□□□□ -1.82
SRO7YPR032W PHO2P07269 559 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms