RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W COX4P04037 155 aa2.53□□□□□ -2.01
SIN3YOL004W NRP1P32770 719 aaKnown RBP RIP-Chip data2.53□□□□□ -2.01not detected
SIN3YOL004W COX13P32799 129 aa2.53□□□□□ -2.01
SIN3YOL004W DOA1P36037 715 aa2.53□□□□□ -2.01
SIN3YOL004W RRP4P38792 359 aaKnown RBP2.53□□□□□ -2.01
SIN3YOL004W RBG1P39729 369 aa2.53□□□□□ -2.01
SIN3YOL004W RTS2P40962 232 aa2.53□□□□□ -2.01
SIN3YOL004W TAF6P53040 516 aa2.53□□□□□ -2.01
SIN3YOL004W DUR1,2P32528 1835 aaKnown RBP2.52□□□□□ -2.01
SIN3YOL004W MRP13P12686 339 aa2.52□□□□□ -2.01
SIN3YOL004W IES6P32617 166 aa2.52□□□□□ -2.01
SIN3YOL004W PRS4P38063 326 aaPredicted RBP2.52□□□□□ -2.01
SIN3YOL004W VMA22P38784 181 aa2.52□□□□□ -2.01
SIN3YOL004W ARO9P38840 513 aaPredicted RBP2.52□□□□□ -2.01
SIN3YOL004W YEL073CP39974 107 aa2.52□□□□□ -2.01
SIN3YOL004W GAT2P40209 560 aa2.52□□□□□ -2.01
SIN3YOL004W NCA3P46955 337 aa2.52□□□□□ -2.01
SIN3YOL004W ERG26P53199 349 aaKnown RBP2.52□□□□□ -2.01
SIN3YOL004W TY1A-MR1Q04215 440 aa2.52□□□□□ -2.01
SIN3YOL004W YOL162WP0CF19 215 aa2.52□□□□□ -2.01
SIN3YOL004W AIM20P40451 204 aa2.52□□□□□ -2.01
SIN3YOL004W YIL012WP40551 113 aa2.52□□□□□ -2.01
SIN3YOL004W TOS3P43637 560 aa2.52□□□□□ -2.01
SIN3YOL004W ALB1P47019 175 aaPredicted RBP2.52□□□□□ -2.01
SIN3YOL004W UTP6Q02354 440 aaKnown RBP2.52□□□□□ -2.01
SIN3YOL004W SRL4Q03085 281 aa2.52□□□□□ -2.01
SIN3YOL004W YDL086WQ07505 273 aa2.52□□□□□ -2.01
SIN3YOL004W TY1A-NL1Q12391 440 aaKnown RBP2.52□□□□□ -2.01
SIN3YOL004W IMP3P32899 183 aaPredicted RBP2.52□□□□□ -2.01
SIN3YOL004W ECT1P33412 323 aa2.52□□□□□ -2.01
SIN3YOL004W SEC72P39742 193 aaKnown RBP2.52□□□□□ -2.01
SIN3YOL004W HIT1P46973 164 aa2.52□□□□□ -2.01
SIN3YOL004W RRP42Q12277 265 aaPredicted RBP2.52□□□□□ -2.01
SIN3YOL004W LAS17Q12446 633 aa2.52□□□□□ -2.01
SIN3YOL004W CNA1P23287 553 aa2.51□□□□□ -2.01
SIN3YOL004W MLH1P38920 769 aa2.51□□□□□ -2.01
SIN3YOL004W YIA6P40556 373 aa2.51□□□□□ -2.01
SIN3YOL004W OTU1P43558 301 aa2.51□□□□□ -2.01
SIN3YOL004W COX16P47081 118 aa2.51□□□□□ -2.01
SIN3YOL004W OCA2P53949 197 aa2.51□□□□□ -2.01
SIN3YOL004W MPS1P54199 764 aa2.51□□□□□ -2.01
SIN3YOL004W GAS3Q03655 524 aa2.51□□□□□ -2.01
SIN3YOL004W DLT1Q04216 342 aa2.51□□□□□ -2.01
SIN3YOL004W GGA1Q06336 557 aa2.51□□□□□ -2.01
SIN3YOL004W DST1P07273 309 aa2.51□□□□□ -2.01
SIN3YOL004W GAR1P28007 205 aaKnown RBP2.51□□□□□ -2.01
SIN3YOL004W MRPL9P31334 269 aa2.51□□□□□ -2.01
SIN3YOL004W ROT2P38138 954 aa2.51□□□□□ -2.01
SIN3YOL004W YHR177WP38867 453 aa2.51□□□□□ -2.01
SIN3YOL004W YMR010WQ03687 405 aa2.51□□□□□ -2.01
SIN3YOL004W MRPL51Q06090 140 aaPredicted RBP2.51□□□□□ -2.01
SIN3YOL004W RPL30P14120 105 aaKnown RBP2.51□□□□□ -2.01
SIN3YOL004W POP7P38291 140 aa2.51□□□□□ -2.01
SIN3YOL004W EGD2P38879 174 aaKnown RBP2.51□□□□□ -2.01
SIN3YOL004W UBC13P52490 153 aa2.51□□□□□ -2.01
SIN3YOL004W CRH1P53301 507 aa2.51□□□□□ -2.01
SIN3YOL004W CUS2P53830 285 aaPredicted RBP2.51□□□□□ -2.01
SIN3YOL004W URH1Q04179 340 aa2.51□□□□□ -2.01
SIN3YOL004W CYC1P00044 109 aaPredicted RBP2.51□□□□□ -2.01
SIN3YOL004W RPS16AP0CX51 143 aaKnown RBP2.51□□□□□ -2.01
SIN3YOL004W RPS16BP0CX52 143 aaKnown RBP2.51□□□□□ -2.01
SIN3YOL004W ARF1P11076 181 aaKnown RBP2.51□□□□□ -2.01
SIN3YOL004W DPB2P24482 689 aaPredicted RBP2.51□□□□□ -2.01
SIN3YOL004W YCL068CP25593 260 aa2.51□□□□□ -2.01
SIN3YOL004W YPS1P32329 569 aa2.51□□□□□ -2.01
SIN3YOL004W OM14P38325 134 aa2.51□□□□□ -2.01
SIN3YOL004W IMD2P38697 523 aaKnown RBP2.51□□□□□ -2.01
SIN3YOL004W TRR2P38816 342 aa2.51□□□□□ -2.01
SIN3YOL004W BUD13P46947 266 aaPredicted RBP2.51□□□□□ -2.01
SIN3YOL004W SLT2Q00772 484 aa2.51□□□□□ -2.01
SIN3YOL004W LSP1Q12230 341 aaKnown RBP2.51□□□□□ -2.01
SIN3YOL004W RRI1Q12468 440 aa2.51□□□□□ -2.01
SIN3YOL004W TUB1P09733 447 aaKnown RBP2.5□□□□□ -2.01
SIN3YOL004W STE18P18852 110 aa2.5□□□□□ -2.01
SIN3YOL004W YPK2P18961 677 aa2.5□□□□□ -2.01
SIN3YOL004W GPI18P38211 433 aa2.5□□□□□ -2.01
SIN3YOL004W IRC7P43623 340 aa2.5□□□□□ -2.01
SIN3YOL004W IMO32P53219 342 aa2.5□□□□□ -2.01
SIN3YOL004W THP1Q08231 455 aa2.5□□□□□ -2.01
SIN3YOL004W YHR127WP38833 243 aaKnown RBP2.5□□□□□ -2.01
SIN3YOL004W ECM10P39987 644 aa2.5□□□□□ -2.01
SIN3YOL004W YJL213WP40896 331 aa2.5□□□□□ -2.01
SIN3YOL004W SAD1P43589 448 aa2.5□□□□□ -2.01
SIN3YOL004W GEP7P53171 287 aa2.5□□□□□ -2.01
SIN3YOL004W YGR168CP53293 376 aa2.5□□□□□ -2.01
SIN3YOL004W NOP19P53317 196 aaPredicted RBP2.5□□□□□ -2.01
SIN3YOL004W RTT103Q05543 409 aa2.5□□□□□ -2.01
SIN3YOL004W SEC10Q06245 871 aa2.5□□□□□ -2.01
SIN3YOL004W YOR365CQ08844 703 aa2.5□□□□□ -2.01
SIN3YOL004W YLL056CQ12177 298 aa2.5□□□□□ -2.01
SIN3YOL004W ERG4P25340 473 aa2.5□□□□□ -2.01
SIN3YOL004W RHB1P25378 209 aa2.5□□□□□ -2.01
SIN3YOL004W ARO4P32449 370 aaKnown RBP2.5□□□□□ -2.01
SIN3YOL004W AST1P35183 429 aa2.5□□□□□ -2.01
SIN3YOL004W FMP46P36141 133 aaKnown RBP2.5□□□□□ -2.01
SIN3YOL004W RFC3P38629 340 aa2.5□□□□□ -2.01
SIN3YOL004W MET30P39014 640 aa2.5□□□□□ -2.01
SIN3YOL004W URM1P40554 99 aaPredicted RBP2.5□□□□□ -2.01
SIN3YOL004W BUD9P53226 547 aa2.5□□□□□ -2.01
SIN3YOL004W YKR005CQ02203 525 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms