RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YAT2P40017 923 aa2.05□□□□□ -2.08
SNU114YKL173W COA1P40452 197 aa2.05□□□□□ -2.08
SNU114YKL173W AGP3P43548 558 aa2.05□□□□□ -2.08
SNU114YKL173W ALB1P47019 175 aaPredicted RBP2.05□□□□□ -2.08
SNU114YKL173W AIM24P47127 394 aa2.05□□□□□ -2.08
SNU114YKL173W IBA57P47158 497 aa2.05□□□□□ -2.08
SNU114YKL173W COS10P52924 374 aa2.05□□□□□ -2.08
SNU114YKL173W SEH1P53011 349 aaKnown RBP2.05□□□□□ -2.08
SNU114YKL173W YIP3P53633 176 aa2.05□□□□□ -2.08
SNU114YKL173W YNL040WP53960 456 aaPredicted RBP2.05□□□□□ -2.08
SNU114YKL173W VBA1Q04301 562 aa2.05□□□□□ -2.08
SNU114YKL173W YMR226CQ05016 267 aaKnown RBP2.05□□□□□ -2.08
SNU114YKL173W PAM18Q07914 168 aa2.05□□□□□ -2.08
SNU114YKL173W MUM3Q08750 479 aa2.05□□□□□ -2.08
SNU114YKL173W SNX3Q08826 162 aaKnown RBP2.05□□□□□ -2.08
SNU114YKL173W APC9Q12107 265 aa2.05□□□□□ -2.08
SNU114YKL173W MCT1Q12283 360 aa2.05□□□□□ -2.08
SNU114YKL173W RGS2Q99188 309 aa2.05□□□□□ -2.08
SNU114YKL173W STH1P32597 1359 aa2.05□□□□□ -2.08
SNU114YKL173W CMK2P22517 447 aa2.05□□□□□ -2.08
SNU114YKL173W NDC1P32500 655 aa2.05□□□□□ -2.08
SNU114YKL173W PRP18P33411 251 aaPredicted RBP2.05□□□□□ -2.08
SNU114YKL173W PRS4P38063 326 aaPredicted RBP2.05□□□□□ -2.08
SNU114YKL173W YKE4P40544 346 aa2.05□□□□□ -2.08
SNU114YKL173W YIL001WP40560 513 aa2.05□□□□□ -2.08
SNU114YKL173W HIT1P46973 164 aa2.05□□□□□ -2.08
SNU114YKL173W MRX5P47007 382 aa2.05□□□□□ -2.08
SNU114YKL173W LIF1P53150 421 aa2.05□□□□□ -2.08
SNU114YKL173W TDA1Q03533 586 aa2.05□□□□□ -2.08
SNU114YKL173W LOA1Q06508 300 aa2.05□□□□□ -2.08
SNU114YKL173W YCR024C-BQ3E7Z8 88 aa2.05□□□□□ -2.08
SNU114YKL173W SEY1Q99287 776 aa2.05□□□□□ -2.08
SNU114YKL173W GEA1P47102 1408 aaPredicted RBP2.05□□□□□ -2.08
SNU114YKL173W RPL31AP0C2H8 113 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W MATALPHA2P0CY08 210 aa2.04□□□□□ -2.08
SNU114YKL173W HMLALPHA2P0CY09 210 aa2.04□□□□□ -2.08
SNU114YKL173W NHP6BP11633 99 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W FBA1P14540 359 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W HPR1P17629 752 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W LDB7P38210 180 aa2.04□□□□□ -2.08
SNU114YKL173W FIG1P38224 298 aa2.04□□□□□ -2.08
SNU114YKL173W YPT35P38815 214 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W ERG28P40030 148 aa2.04□□□□□ -2.08
SNU114YKL173W POG1P40473 351 aa2.04□□□□□ -2.08
SNU114YKL173W GDS1P41913 522 aa2.04□□□□□ -2.08
SNU114YKL173W WWM1P43582 211 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W RMI1Q02685 241 aa2.04□□□□□ -2.08
SNU114YKL173W FMP42Q04991 504 aa2.04□□□□□ -2.08
SNU114YKL173W FAR8Q05040 523 aa2.04□□□□□ -2.08
SNU114YKL173W DXO1Q06349 442 aa2.04□□□□□ -2.08
SNU114YKL173W YPR147CQ06522 304 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W CDD1Q06549 142 aa2.04□□□□□ -2.08
SNU114YKL173W THP2O13539 261 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W REP1P03871 373 aa2.04□□□□□ -2.08
SNU114YKL173W SNF6P18888 332 aa2.04□□□□□ -2.08
SNU114YKL173W PMT2P31382 759 aa2.04□□□□□ -2.08
SNU114YKL173W MNS1P32906 549 aa2.04□□□□□ -2.08
SNU114YKL173W YKL187CP34231 750 aa2.04□□□□□ -2.08
SNU114YKL173W CAF4P36130 643 aa2.04□□□□□ -2.08
SNU114YKL173W SCO2P38072 301 aa2.04□□□□□ -2.08
SNU114YKL173W RBG1P39729 369 aa2.04□□□□□ -2.08
SNU114YKL173W FRT2P39734 528 aa2.04□□□□□ -2.08
SNU114YKL173W YFR057WP43625 151 aa2.04□□□□□ -2.08
SNU114YKL173W HOC1P47124 396 aa2.04□□□□□ -2.08
SNU114YKL173W CWC23P52868 283 aaPredicted RBP2.04□□□□□ -2.08
SNU114YKL173W SED5Q01590 340 aa2.04□□□□□ -2.08
SNU114YKL173W EBS1Q03466 884 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W ASR1Q06834 288 aa2.04□□□□□ -2.08
SNU114YKL173W YKL183C-AQ3E765 70 aa2.04□□□□□ -2.08
SNU114YKL173W RIM15P43565 1770 aa2.04□□□□□ -2.08
SNU114YKL173W RPL27AP0C2H6 136 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W RPL27BP0C2H7 136 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W ATR1P13090 542 aa2.04□□□□□ -2.08
SNU114YKL173W PPA2P28239 310 aa2.04□□□□□ -2.08
SNU114YKL173W EHD3P28817 500 aa2.04□□□□□ -2.08
SNU114YKL173W VMA6P32366 345 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W RIB5P38145 238 aa2.04□□□□□ -2.08
SNU114YKL173W NPT1P39683 429 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W DIM1P41819 318 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W YGL159WP53110 370 aa2.04□□□□□ -2.08
SNU114YKL173W MTM1P53320 366 aa2.04□□□□□ -2.08
SNU114YKL173W GOR1P53839 350 aa2.04□□□□□ -2.08
SNU114YKL173W SUR7P54003 302 aa2.04□□□□□ -2.08
SNU114YKL173W SCS7Q03529 384 aa2.04□□□□□ -2.08
SNU114YKL173W ERP1Q05359 219 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W YOR387CQ08910 206 aa2.04□□□□□ -2.08
SNU114YKL173W YLR053CQ12026 108 aa2.04□□□□□ -2.08
SNU114YKL173W TAF10Q12030 206 aa2.04□□□□□ -2.08
SNU114YKL173W THP3Q12049 470 aaKnown RBP2.04□□□□□ -2.08
SNU114YKL173W FRE8Q12209 686 aa2.04□□□□□ -2.08
SNU114YKL173W PUT3P25502 979 aaPredicted RBP2.03□□□□□ -2.08
SNU114YKL173W KAR9P32526 644 aa2.03□□□□□ -2.08
SNU114YKL173W CLG1P35190 452 aa2.03□□□□□ -2.08
SNU114YKL173W PMU1P36069 295 aa2.03□□□□□ -2.08
SNU114YKL173W FMP46P36141 133 aaKnown RBP2.03□□□□□ -2.08
SNU114YKL173W YPC1P38298 316 aa2.03□□□□□ -2.08
SNU114YKL173W YHI9P38765 294 aa2.03□□□□□ -2.08
SNU114YKL173W NBP1P52919 319 aaPredicted RBP2.03□□□□□ -2.08
SNU114YKL173W FYV6P53913 173 aa2.03□□□□□ -2.08
SNU114YKL173W PEX12Q04370 399 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms