RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C TY2B-LR1P0C2J3 1770 aa1.86□□□□□ -2.11
SHE2YKL130C TY2B-FP0CX63 1770 aa1.86□□□□□ -2.11
SHE2YKL130C TY2B-GR2P0CX64 1770 aa1.86□□□□□ -2.11
SHE2YKL130C TY2B-CP25384 1770 aa1.86□□□□□ -2.11
SHE2YKL130C TY2B-DR2Q03494 1770 aa1.86□□□□□ -2.11
SHE2YKL130C TY1B-DR1Q03855 1755 aa1.86□□□□□ -2.11
SHE2YKL130C TY2B-DR3Q07791 1770 aaKnown RBP1.86□□□□□ -2.11
SHE2YKL130C TY2B-OR1Q12113 1770 aa1.86□□□□□ -2.11
SHE2YKL130C TY1B-BRQ12193 1756 aa1.86□□□□□ -2.11
SHE2YKL130C TY1B-GR3Q12316 1755 aa1.86□□□□□ -2.11
SHE2YKL130C TY2B-DR1Q12472 1770 aa1.86□□□□□ -2.11
SHE2YKL130C TY2B-OR2Q12501 1770 aa1.86□□□□□ -2.11
SHE2YKL130C TY1B-ORQ92393 1755 aa1.86□□□□□ -2.11
SHE2YKL130C PRB1P09232 635 aa1.86□□□□□ -2.11
SHE2YKL130C ASP3-2P0CX77 362 aa1.86□□□□□ -2.11
SHE2YKL130C ASP3-3P0CX78 362 aa1.86□□□□□ -2.11
SHE2YKL130C ASP3-4P0CX79 362 aa1.86□□□□□ -2.11
SHE2YKL130C ASP3-1P0CZ17 362 aa1.86□□□□□ -2.11
SHE2YKL130C BGL2P15703 313 aaKnown RBP1.86□□□□□ -2.11
SHE2YKL130C MRPL20P22354 195 aaPredicted RBP1.86□□□□□ -2.11
SHE2YKL130C CMK2P22517 447 aa1.86□□□□□ -2.11
SHE2YKL130C ARO4P32449 370 aaKnown RBP1.86□□□□□ -2.11
SHE2YKL130C SRB4P32569 687 aa1.86□□□□□ -2.11
SHE2YKL130C PRS1P32895 427 aaKnown RBP1.86□□□□□ -2.11
SHE2YKL130C YKL187CP34231 750 aa1.86□□□□□ -2.11
SHE2YKL130C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
SHE2YKL130C PRS4P38063 326 aaPredicted RBP1.86□□□□□ -2.11
SHE2YKL130C RCK1P38622 512 aa1.86□□□□□ -2.11
SHE2YKL130C PET8P38921 284 aa1.86□□□□□ -2.11
SHE2YKL130C NPT1P39683 429 aaKnown RBP1.86□□□□□ -2.11
SHE2YKL130C HEM14P40012 539 aa1.86□□□□□ -2.11
SHE2YKL130C DDI1P40087 428 aa1.86□□□□□ -2.11
SHE2YKL130C STB1P42845 420 aa1.86□□□□□ -2.11
SHE2YKL130C IGD1P43598 195 aa1.86□□□□□ -2.11
SHE2YKL130C HIT1P46973 164 aa1.86□□□□□ -2.11
SHE2YKL130C TPC1P53257 314 aa1.86□□□□□ -2.11
SHE2YKL130C TRM44Q02648 567 aaKnown RBP1.86□□□□□ -2.11
SHE2YKL130C SCS7Q03529 384 aa1.86□□□□□ -2.11
SHE2YKL130C GMC1Q04399 608 aa1.86□□□□□ -2.11
SHE2YKL130C SDO1Q07953 250 aaKnown RBP1.86□□□□□ -2.11
SHE2YKL130C VIK1Q12045 647 aa1.86□□□□□ -2.11
SHE2YKL130C PER33Q12144 273 aa1.86□□□□□ -2.11
SHE2YKL130C HRT3Q12347 344 aa1.86□□□□□ -2.11
SHE2YKL130C LAG2Q92325 660 aa1.86□□□□□ -2.11
SHE2YKL130C ISY1P21374 235 aaPredicted RBP1.85□□□□□ -2.11
SHE2YKL130C YCR016WP25617 290 aaKnown RBP1.85□□□□□ -2.11
SHE2YKL130C SUA5P32579 426 aa1.85□□□□□ -2.11
SHE2YKL130C CYM1P32898 989 aa1.85□□□□□ -2.11
SHE2YKL130C MRPL6P32904 214 aa1.85□□□□□ -2.11
SHE2YKL130C SPT4P32914 102 aaPredicted RBP1.85□□□□□ -2.11
SHE2YKL130C BMH2P34730 273 aaKnown RBP1.85□□□□□ -2.11
SHE2YKL130C SWD3P38123 315 aa1.85□□□□□ -2.11
SHE2YKL130C GPI18P38211 433 aa1.85□□□□□ -2.11
SHE2YKL130C BIG1P38813 335 aa1.85□□□□□ -2.11
SHE2YKL130C SHC1P39000 512 aa1.85□□□□□ -2.11
SHE2YKL130C YER085CP40058 173 aa1.85□□□□□ -2.11
SHE2YKL130C RPL10P41805 221 aaKnown RBP1.85□□□□□ -2.11
SHE2YKL130C ASG7P46993 209 aa1.85□□□□□ -2.11
SHE2YKL130C SDS23P53172 527 aa1.85□□□□□ -2.11
SHE2YKL130C TIM21P53220 239 aa1.85□□□□□ -2.11
SHE2YKL130C MNT4P53745 580 aa1.85□□□□□ -2.11
SHE2YKL130C YNR066CP53752 436 aa1.85□□□□□ -2.11
SHE2YKL130C OST6Q03723 332 aa1.85□□□□□ -2.11
SHE2YKL130C YDR115WQ04598 105 aa1.85□□□□□ -2.11
SHE2YKL130C TAF9Q05027 157 aa1.85□□□□□ -2.11
SHE2YKL130C YLR283WQ05867 314 aa1.85□□□□□ -2.11
SHE2YKL130C SFH1Q06168 426 aa1.85□□□□□ -2.11
SHE2YKL130C PEX30Q06169 523 aa1.85□□□□□ -2.11
SHE2YKL130C CTR3Q06686 241 aa1.85□□□□□ -2.11
SHE2YKL130C PAM18Q07914 168 aa1.85□□□□□ -2.11
SHE2YKL130C ATG31Q12421 196 aa1.85□□□□□ -2.11
SHE2YKL130C FOL3Q12676 427 aaPredicted RBP1.85□□□□□ -2.11
SHE2YKL130C YBL111CQ3E7Y5 667 aa1.85□□□□□ -2.11
SHE2YKL130C DOP1Q03921 1698 aa1.85□□□□□ -2.11
SHE2YKL130C PDR15Q04182 1529 aaKnown RBP1.85□□□□□ -2.11
SHE2YKL130C TY3B-GQ99315 1547 aa1.85□□□□□ -2.11
SHE2YKL130C SPO14P36126 1683 aa1.84□□□□□ -2.11
SHE2YKL130C RPO21P04050 1733 aaKnown RBP1.84□□□□□ -2.11
SHE2YKL130C CDC42P19073 191 aa1.84□□□□□ -2.11
SHE2YKL130C RPB4P20433 221 aaPredicted RBP1.84□□□□□ -2.11
SHE2YKL130C TPS2P31688 896 aaKnown RBP1.84□□□□□ -2.11
SHE2YKL130C AEP1P32493 518 aa1.84□□□□□ -2.11
SHE2YKL130C MSN4P33749 630 aa1.84□□□□□ -2.11
SHE2YKL130C GGC1P38988 300 aa1.84□□□□□ -2.11
SHE2YKL130C VAB2P40003 282 aa1.84□□□□□ -2.11
SHE2YKL130C RTR1P40084 226 aaPredicted RBP1.84□□□□□ -2.11
SHE2YKL130C IBA57P47158 497 aa1.84□□□□□ -2.11
SHE2YKL130C KTR6P54070 446 aa1.84□□□□□ -2.11
SHE2YKL130C YLR152CP54072 576 aa1.84□□□□□ -2.11
SHE2YKL130C MRX11Q03079 207 aa1.84□□□□□ -2.11
SHE2YKL130C YDR209CQ03480 137 aa1.84□□□□□ -2.11
SHE2YKL130C INP2Q03824 705 aa1.84□□□□□ -2.11
SHE2YKL130C KRE28Q04431 385 aa1.84□□□□□ -2.11
SHE2YKL130C DPP1Q05521 289 aa1.84□□□□□ -2.11
SHE2YKL130C TAZ1Q06510 381 aa1.84□□□□□ -2.11
SHE2YKL130C MMT2Q08970 484 aa1.84□□□□□ -2.11
SHE2YKL130C SRO7Q12038 1033 aa1.84□□□□□ -2.11
SHE2YKL130C MSH5Q12175 901 aa1.84□□□□□ -2.11
SHE2YKL130C YOR029WQ12243 111 aa1.84□□□□□ -2.11
SHE2YKL130C SME1Q12330 94 aaPredicted RBP1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms