RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	STE4	P18851	423 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	YCP4	P25349	247 aa	Known RBP	4.9	□□□□□ -1.63
RRN3	YKL125W	YKL107W	P34251	309 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	YBR284W	P38150	797 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	YER158C	P40095	573 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	SWM2	P40342	146 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	LRO1	P40345	661 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	ARG2	P40360	574 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	QRI7	P43122	407 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	YFL052W	P43551	465 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	AZR1	P50080	613 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	STR3	P53101	465 aa	Known RBP	4.9	□□□□□ -1.63
RRN3	YKL125W	YSA1	Q01976	231 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	TRM44	Q02648	567 aa	Known RBP	4.9	□□□□□ -1.63
RRN3	YKL125W	CCE1	Q03702	353 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	YDR444W	Q04093	687 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	CTS2	Q06350	511 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	SWC7	Q06707	132 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	ATG10	Q07879	167 aa		4.9	□□□□□ -1.63
RRN3	YKL125W	PEP4	P07267	405 aa	Known RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	RPL35A	P0CX84	120 aa	Known RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	RPL35B	P0CX85	120 aa	Known RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	EXG1	P23776	448 aa	Known RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	ALY1	P36117	915 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	DBP8	P38719	431 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	SFB3	P38810	929 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	FLX1	P40464	311 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	BMT5	P40493	336 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	ATG18	P43601	500 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	CHA4	P43634	648 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	TRM9	P49957	279 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	AIF1	P52923	378 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	TIM21	P53220	239 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	YNR029C	P53729	429 aa	Known RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	YNL134C	P53912	376 aa	Known RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	ALG11	P53954	548 aa	Known RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	PRP38	Q00723	242 aa	Predicted RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	VBA1	Q04301	562 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	YMR253C	Q04835	414 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	BER1	Q06688	274 aa	Known RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	COQ10	Q08058	207 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	YOL131W	Q08270	108 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	LEA1	Q08963	238 aa	Predicted RBP	4.89	□□□□□ -1.63
RRN3	YKL125W	GRE1	Q08969	168 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	YDR056C	Q12025	205 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	UPC2	Q12151	913 aa		4.89	□□□□□ -1.63
RRN3	YKL125W	THP2	O13539	261 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	YPR170W-B	P0C5R9	85 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	SCH9	P11792	824 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	AMD1	P15274	810 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	SNF5	P18480	905 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	RBK1	P25332	333 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	IMG2	P25642	146 aa	Predicted RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	HOM6	P31116	359 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	SYN8	P31377	255 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	MET22	P32179	357 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	NTF2	P33331	125 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	YKL075C	P36083	450 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	ZTA1	P38230	334 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	MTC4	P38335	694 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	YHR033W	P38690	423 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	ARP1	P38696	384 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	SKN7	P38889	622 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	GCV3	P39726	170 aa	Predicted RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	PRM2	P40534	656 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	OST3	P48439	350 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	AVT4	P50944	713 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	COS10	P52924	374 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	YGR117C	P53270	476 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	ACT1	P60010	375 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	MSS11	Q03825	758 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	ECM18	Q04623	453 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	YMR315W	Q04869	349 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	WTM1	Q12363	437 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	SLO1	Q3E784	85 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	BI3	Q9ZZW7	517 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	SAM1	P10659	382 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	SEC22	P22214	214 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	MIG1	P27705	504 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	ARO2	P28777	376 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	PRE4	P30657	266 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	SUA5	P32579	426 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	LOT5	P34234	306 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	PRY2	P36110	329 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	RIB1	P38066	345 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	SRP68	P38687	599 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	YHR122W	P38829	231 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	HEM14	P40012	539 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	OSW5	P40219	148 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	YIL067C	P40514	678 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	SMK1	P41808	388 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	YHC3	P47040	408 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	SDT1	P53078	280 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	YGR250C	P53316	781 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	APM1	Q00776	475 aa	Predicted RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	CTF19	Q02732	369 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	OAZ1	Q02803	292 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	TY1A-DR2	Q03964	440 aa	Known RBP	4.88	□□□□□ -1.63
RRN3	YKL125W	TMN2	Q04562	672 aa		4.88	□□□□□ -1.63
RRN3	YKL125W	TY1A-BL	Q12266	440 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms