RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W VPS60Q03390 229 aa2.04□□□□□ -2.08
NUP100YKL068W MSS11Q03825 758 aa2.04□□□□□ -2.08
NUP100YKL068W DIC1Q06143 298 aa2.04□□□□□ -2.08
NUP100YKL068W YDL114WQ07530 308 aa2.04□□□□□ -2.08
NUP100YKL068W JLP1Q12358 412 aa2.04□□□□□ -2.08
NUP100YKL068W YOP1Q12402 180 aa2.04□□□□□ -2.08
NUP100YKL068W CCH1P50077 2039 aa2.04□□□□□ -2.08
NUP100YKL068W RBK1P25332 333 aa2.04□□□□□ -2.08
NUP100YKL068W ACB1P31787 87 aa2.04□□□□□ -2.08
NUP100YKL068W RAD5P32849 1169 aaPredicted RBP2.04□□□□□ -2.08
NUP100YKL068W YKL063CP35725 167 aa2.04□□□□□ -2.08
NUP100YKL068W APD1P38281 316 aa2.04□□□□□ -2.08
NUP100YKL068W LYS1P38998 373 aaRIP-Chip data2.04□□□□□ -2.08not detected
NUP100YKL068W VRG4P40107 337 aa2.04□□□□□ -2.08
NUP100YKL068W YJR079WP47126 109 aa2.04□□□□□ -2.08
NUP100YKL068W YIP1P53039 248 aa2.04□□□□□ -2.08
NUP100YKL068W GTR2P53290 341 aa2.04□□□□□ -2.08
NUP100YKL068W GPI1P53306 609 aa2.04□□□□□ -2.08
NUP100YKL068W CTR3Q06686 241 aa2.04□□□□□ -2.08
NUP100YKL068W DDC1Q08949 612 aa2.04□□□□□ -2.08
NUP100YKL068W TPT1Q12272 230 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W NCA2Q12374 616 aa2.04□□□□□ -2.08
NUP100YKL068W RPL31AP0C2H8 113 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W ZWF1P11412 505 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W CDC10P25342 322 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W ITR2P30606 609 aa2.04□□□□□ -2.08
NUP100YKL068W QRI5P32344 111 aa2.04□□□□□ -2.08
NUP100YKL068W UTR4P32626 227 aa2.04□□□□□ -2.08
NUP100YKL068W CSE1P33307 960 aa2.04□□□□□ -2.08
NUP100YKL068W FLO10P36170 1169 aa2.04□□□□□ -2.08
NUP100YKL068W YIA6P40556 373 aa2.04□□□□□ -2.08
NUP100YKL068W TDA10P42938 290 aa2.04□□□□□ -2.08
NUP100YKL068W WWM1P43582 211 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W MNN10P50108 393 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W SBH2P52871 88 aa2.04□□□□□ -2.08
NUP100YKL068W MGA1P53050 456 aa2.04□□□□□ -2.08
NUP100YKL068W YGL117WP53133 265 aa2.04□□□□□ -2.08
NUP100YKL068W SOL4P53315 255 aa2.04□□□□□ -2.08
NUP100YKL068W YNL140CP53910 189 aa2.04□□□□□ -2.08
NUP100YKL068W YPL077CQ02831 240 aa2.04□□□□□ -2.08
NUP100YKL068W MRPL51Q06090 140 aaPredicted RBP2.04□□□□□ -2.08
NUP100YKL068W YPL150WQ12152 901 aa2.04□□□□□ -2.08
NUP100YKL068W SSC1P0CS90 654 aaKnown RBP2.03□□□□□ -2.08
NUP100YKL068W CPT1P17898 393 aa2.03□□□□□ -2.08
NUP100YKL068W ISY1P21374 235 aaPredicted RBP2.03□□□□□ -2.08
NUP100YKL068W CPR3P25719 182 aa2.03□□□□□ -2.08
NUP100YKL068W PRX1P34227 261 aaKnown RBP2.03□□□□□ -2.08
NUP100YKL068W YKL187CP34231 750 aa2.03□□□□□ -2.08
NUP100YKL068W RIM2P38127 377 aa2.03□□□□□ -2.08
NUP100YKL068W GPX2P38143 162 aa2.03□□□□□ -2.08
NUP100YKL068W YPC1P38298 316 aa2.03□□□□□ -2.08
NUP100YKL068W NPT1P39683 429 aaKnown RBP2.03□□□□□ -2.08
NUP100YKL068W EXO1P39875 702 aa2.03□□□□□ -2.08
NUP100YKL068W KEG1P43614 200 aa2.03□□□□□ -2.08
NUP100YKL068W SFH5P47008 294 aa2.03□□□□□ -2.08
NUP100YKL068W YJR012CP47087 207 aa2.03□□□□□ -2.08
NUP100YKL068W YJR030CP47101 745 aa2.03□□□□□ -2.08
NUP100YKL068W MST27P53176 234 aa2.03□□□□□ -2.08
NUP100YKL068W PEX31P53203 462 aa2.03□□□□□ -2.08
NUP100YKL068W IBD2P53892 351 aa2.03□□□□□ -2.08
NUP100YKL068W YLR460CP54007 376 aa2.03□□□□□ -2.08
NUP100YKL068W RHO4Q00246 291 aa2.03□□□□□ -2.08
NUP100YKL068W SLD5Q03406 294 aa2.03□□□□□ -2.08
NUP100YKL068W BET5Q03630 159 aa2.03□□□□□ -2.08
NUP100YKL068W DXO1Q06349 442 aa2.03□□□□□ -2.08
NUP100YKL068W SSK1Q07084 712 aa2.03□□□□□ -2.08
NUP100YKL068W SRL2Q12020 392 aa2.03□□□□□ -2.08
NUP100YKL068W RGT2Q12300 763 aa2.03□□□□□ -2.08
NUP100YKL068W IRA2P19158 3079 aa2.03□□□□□ -2.08
NUP100YKL068W PAB1P04147 577 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
NUP100YKL068W RPL7AP05737 244 aaKnown RBP2.03□□□□□ -2.08
NUP100YKL068W ALG7P07286 448 aa2.03□□□□□ -2.08
NUP100YKL068W SPS100P13130 326 aa2.03□□□□□ -2.08
NUP100YKL068W GCY1P14065 312 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
NUP100YKL068W YAP1P19880 650 aaKnown RBP2.03□□□□□ -2.08
NUP100YKL068W ERG4P25340 473 aa2.03□□□□□ -2.08
NUP100YKL068W SPS18P32572 300 aa2.03□□□□□ -2.08
NUP100YKL068W MCH2P36032 473 aa2.03□□□□□ -2.08
NUP100YKL068W YMC2P38087 329 aa2.03□□□□□ -2.08
NUP100YKL068W ECM8P38246 354 aa2.03□□□□□ -2.08
NUP100YKL068W ATG12P38316 186 aa2.03□□□□□ -2.08
NUP100YKL068W YHK8P38776 514 aa2.03□□□□□ -2.08
NUP100YKL068W PCL5P38794 229 aa2.03□□□□□ -2.08
NUP100YKL068W GEP4P38812 185 aa2.03□□□□□ -2.08
NUP100YKL068W ARG2P40360 574 aa2.03□□□□□ -2.08
NUP100YKL068W GDS1P41913 522 aa2.03□□□□□ -2.08
NUP100YKL068W CIN2P46670 268 aa2.03□□□□□ -2.08
NUP100YKL068W ASN1P49089 572 aaKnown RBP2.03□□□□□ -2.08
NUP100YKL068W PHO23P50947 330 aa2.03□□□□□ -2.08
NUP100YKL068W MRM2P53123 320 aa2.03□□□□□ -2.08
NUP100YKL068W MSO1P53604 210 aaKnown RBP2.03□□□□□ -2.08
NUP100YKL068W YNL040WP53960 456 aaPredicted RBP2.03□□□□□ -2.08
NUP100YKL068W YDR248CQ03786 193 aa2.03□□□□□ -2.08
NUP100YKL068W YML096WQ04489 525 aa2.03□□□□□ -2.08
NUP100YKL068W CSM4Q08955 156 aa2.03□□□□□ -2.08
NUP100YKL068W RPL7BQ12213 244 aaKnown RBP2.03□□□□□ -2.08
NUP100YKL068W ICT1Q12385 394 aa2.03□□□□□ -2.08
NUP100YKL068W DYN1P36022 4092 aa2.02□□□□□ -2.09
NUP100YKL068W RPS28BP0C0X0 67 aaKnown RBP2.02□□□□□ -2.09
NUP100YKL068W CBS2P14905 389 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms