RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	CHA4	P43634	648 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	YJL045W	P47052	634 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	YJR124C	P47159	448 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	SPT20	P50875	604 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	UBC12	P52491	188 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	ARO8	P53090	500 aa	Known RBP	5.36	□□□□□ -1.55
SUB2	YDL084W	ROG1	P53118	685 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	MRPS35	P53292	345 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	YML037C	Q03703	340 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	AIM36	Q03798	255 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	YMR130W	Q04223	302 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	ADH6	Q04894	360 aa	Known RBP	5.36	□□□□□ -1.55
SUB2	YDL084W	YLR446W	Q06204	433 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	IPK1	Q06667	281 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	MRPL35	Q06678	367 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	YOR059C	Q08448	450 aa	Known RBP	5.36	□□□□□ -1.55
SUB2	YDL084W	MDM32	Q12171	622 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	YCT1	Q12235	531 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	RIB2	Q12362	591 aa	Known RBP	5.36	□□□□□ -1.55
SUB2	YDL084W	YDL199C	Q12407	687 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	RDI1	Q12434	202 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	YPR1	Q12458	312 aa		5.36	□□□□□ -1.55
SUB2	YDL084W	SOD2	P00447	233 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	DED1	P06634	604 aa	Known RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	COR1	P07256	457 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	MCK1	P21965	375 aa	Known RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	PUT3	P25502	979 aa	Predicted RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	VAC17	P25591	423 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	PPZ1	P26570	692 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	ARO2	P28777	376 aa	Known RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	ARP2	P32381	391 aa	Known RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	CAT2	P32796	670 aa	Known RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	YKR051W	P36142	418 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	FLO10	P36170	1169 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	SSN3	P39073	555 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	YEA6	P39953	335 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	COA1	P40452	197 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	GAT1	P43574	510 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	ASN2	P49090	572 aa	Known RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	PEX31	P53203	462 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	POP6	P53218	158 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	BIO5	P53744	561 aa	Known RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	ELC1	Q03071	99 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	MAK3	Q03503	176 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	ATG10	Q07879	167 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	THI21	Q08975	551 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	YLR050C	Q12155	161 aa	Known RBP	5.35	□□□□□ -1.55
SUB2	YDL084W	RGT2	Q12300	763 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	YKL033W-A	Q86ZR7	236 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	RIB3	Q99258	208 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	IZH4	Q99393	312 aa		5.35	□□□□□ -1.55
SUB2	YDL084W	YFL068W	P0CX99	160 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	YLL066W-A	P0CY00	160 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	YLL067W-A	P0CY01	160 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	ATR1	P13090	542 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	CTA1	P15202	515 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	RPB8	P20436	146 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	EPT1	P22140	391 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	NAR1	P23503	491 aa	Known RBP	5.34	□□□□□ -1.55
SUB2	YDL084W	BUB2	P26448	306 aa	Predicted RBP	5.34	□□□□□ -1.55
SUB2	YDL084W	YPS1	P32329	569 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	CMC1	P36064	111 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	PRY2	P36110	329 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	ROT2	P38138	954 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	QDR3	P38227	689 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	TRM7	P38238	310 aa	Known RBP	5.34	□□□□□ -1.55
SUB2	YDL084W	PRE6	P40303	254 aa	Known RBP	5.34	□□□□□ -1.55
SUB2	YDL084W	PHO23	P50947	330 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	MKC7	P53379	596 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	DIG1	Q03063	452 aa	Known RBP	5.34	□□□□□ -1.55
SUB2	YDL084W	GOT1	Q03554	138 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	CCE1	Q03702	353 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	HOF1	Q05080	669 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	YLR407W	Q06070	228 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	MRPL51	Q06090	140 aa	Predicted RBP	5.34	□□□□□ -1.55
SUB2	YDL084W	FDH1	Q08911	376 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	COX17	Q12287	69 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	PRP46	Q12417	451 aa	Predicted RBP	5.34	□□□□□ -1.55
SUB2	YDL084W	PRM4	Q12498	284 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	YGL194C-A	Q2V2P6	80 aa		5.34	□□□□□ -1.55
SUB2	YDL084W	RPS21B	Q3E754	87 aa	Known RBP	5.34	□□□□□ -1.55
SUB2	YDL084W	ARO1	P08566	1588 aa	Known RBP	5.34	□□□□□ -1.56
SUB2	YDL084W	RPL9A	P05738	191 aa	Known RBP	5.33	□□□□□ -1.56
SUB2	YDL084W	RPL3	P14126	387 aa	Known RBP	5.33	□□□□□ -1.56
SUB2	YDL084W	SCO1	P23833	295 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	FUB1	P25659	250 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	HOM6	P31116	359 aa	Known RBP	5.33	□□□□□ -1.56
SUB2	YDL084W	MRP49	P32388	137 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	EMP70	P32802	667 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	UGA4	P32837	571 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	YKL162C	P36052	402 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	PAN3	P36102	679 aa	Predicted RBP	5.33	□□□□□ -1.56
SUB2	YDL084W	FRM2	P37261	193 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	VBA2	P38358	474 aa	Known RBP	5.33	□□□□□ -1.56
SUB2	YDL084W	YHR033W	P38690	423 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	SKN7	P38889	622 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	SNU13	P39990	126 aa	Known RBP	5.33	□□□□□ -1.56
SUB2	YDL084W	FIS1	P40515	155 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	MEP2	P41948	499 aa		5.33	□□□□□ -1.56
SUB2	YDL084W	RPN11	P43588	306 aa	Known RBP	5.33	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms