RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W ATG18P43601 500 aa5.78□□□□□ -1.48
LDB16YCL005W IRC6P43615 237 aa5.78□□□□□ -1.48
LDB16YCL005W LCL3P53153 274 aa5.78□□□□□ -1.48
LDB16YCL005W MAL12P53341 584 aa5.78□□□□□ -1.48
LDB16YCL005W PAU12P53343 120 aa5.78□□□□□ -1.48
LDB16YCL005W DCR2Q05924 578 aa5.78□□□□□ -1.48
LDB16YCL005W UTP21Q06078 939 aaPredicted RBP5.78□□□□□ -1.48
LDB16YCL005W TAZ1Q06510 381 aa5.78□□□□□ -1.48
LDB16YCL005W YPR1Q12458 312 aa5.78□□□□□ -1.48
LDB16YCL005W PDE2P06776 526 aa5.77□□□□□ -1.49
LDB16YCL005W CAP2P13517 287 aa5.77□□□□□ -1.49
LDB16YCL005W PTC6P25646 442 aa5.77□□□□□ -1.49
LDB16YCL005W FUN19P28003 413 aaPredicted RBP5.77□□□□□ -1.49
LDB16YCL005W SPT14P32363 452 aa5.77□□□□□ -1.49
LDB16YCL005W HSP150P32478 413 aa5.77□□□□□ -1.49
LDB16YCL005W VPS17P32913 551 aa5.77□□□□□ -1.49
LDB16YCL005W SHE2P36068 246 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
LDB16YCL005W PAU24P38155 120 aa5.77□□□□□ -1.49
LDB16YCL005W YBR137WP38276 179 aa5.77□□□□□ -1.49
LDB16YCL005W BAP3P41815 604 aa5.77□□□□□ -1.49
LDB16YCL005W CUP9P41817 306 aa5.77□□□□□ -1.49
LDB16YCL005W CAF16P43569 289 aa5.77□□□□□ -1.49
LDB16YCL005W MRH4P53166 561 aa5.77□□□□□ -1.49
LDB16YCL005W IMO32P53219 342 aa5.77□□□□□ -1.49
LDB16YCL005W MPP6P53725 186 aaPredicted RBP5.77□□□□□ -1.49
LDB16YCL005W MRPL1Q04599 285 aa5.77□□□□□ -1.49
LDB16YCL005W SEI1Q06058 285 aa5.77□□□□□ -1.49
LDB16YCL005W RGC1Q06108 1083 aaKnown RBP5.77□□□□□ -1.49
LDB16YCL005W HNT3Q08702 217 aa5.77□□□□□ -1.49
LDB16YCL005W RRG7Q08774 242 aaPredicted RBP5.77□□□□□ -1.49
LDB16YCL005W RDR1Q08904 546 aa5.77□□□□□ -1.49
LDB16YCL005W BTS1Q12051 335 aa5.77□□□□□ -1.49
LDB16YCL005W RLM1Q12224 676 aa5.77□□□□□ -1.49
LDB16YCL005W FRE6Q12473 712 aa5.77□□□□□ -1.49
LDB16YCL005W SET6Q12529 373 aa5.77□□□□□ -1.49
LDB16YCL005W YLR099W-AQ3E798 87 aa5.77□□□□□ -1.49
LDB16YCL005W HMG1P12683 1054 aa5.76□□□□□ -1.49
LDB16YCL005W RPA135P22138 1203 aaKnown RBP5.76□□□□□ -1.49
LDB16YCL005W GAS1P22146 559 aaKnown RBP5.76□□□□□ -1.49
LDB16YCL005W DOA4P32571 926 aa5.76□□□□□ -1.49
LDB16YCL005W YER184CP39961 794 aa5.76□□□□□ -1.49
LDB16YCL005W YNL208WP40159 199 aaKnown RBP5.76□□□□□ -1.49
LDB16YCL005W IRC24P40580 263 aa5.76□□□□□ -1.49
LDB16YCL005W YFR054CP43622 192 aa5.76□□□□□ -1.49
LDB16YCL005W PMT3P47190 753 aa5.76□□□□□ -1.49
LDB16YCL005W YAT1P80235 687 aa5.76□□□□□ -1.49
LDB16YCL005W NUP116Q02630 1113 aa5.76□□□□□ -1.49
LDB16YCL005W BUR2Q05949 395 aa5.76□□□□□ -1.49
LDB16YCL005W AIM6Q07716 390 aa5.76□□□□□ -1.49
LDB16YCL005W HRT1Q08273 121 aa5.76□□□□□ -1.49
LDB16YCL005W YOR378WQ08902 515 aa5.76□□□□□ -1.49
LDB16YCL005W YPL199CQ08954 240 aa5.76□□□□□ -1.49
LDB16YCL005W RTN2Q12443 393 aa5.76□□□□□ -1.49
LDB16YCL005W QCR7P00128 127 aa5.75□□□□□ -1.49
LDB16YCL005W YPT1P01123 206 aaKnown RBP5.75□□□□□ -1.49
LDB16YCL005W CDC9P04819 755 aa5.75□□□□□ -1.49
LDB16YCL005W MRP1P10662 321 aaKnown RBP5.75□□□□□ -1.49
LDB16YCL005W RPB8P20436 146 aa5.75□□□□□ -1.49
LDB16YCL005W AIM17P23180 465 aaKnown RBP5.75□□□□□ -1.49
LDB16YCL005W RAD51P25454 400 aa5.75□□□□□ -1.49
LDB16YCL005W PUT3P25502 979 aaPredicted RBP5.75□□□□□ -1.49
LDB16YCL005W BUD23P25627 275 aaPredicted RBP5.75□□□□□ -1.49
LDB16YCL005W HOM6P31116 359 aaKnown RBP5.75□□□□□ -1.49
LDB16YCL005W PAD1P33751 242 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
LDB16YCL005W SEF1P34228 1148 aa5.75□□□□□ -1.49
LDB16YCL005W MTH1P35198 433 aa5.75□□□□□ -1.49
LDB16YCL005W TMA19P35691 167 aaKnown RBP5.75□□□□□ -1.49
LDB16YCL005W PMT6P42934 759 aa5.75□□□□□ -1.49
LDB16YCL005W IRC18P47056 224 aa5.75□□□□□ -1.49
LDB16YCL005W PMT5P52867 743 aa5.75□□□□□ -1.49
LDB16YCL005W ARO8P53090 500 aaKnown RBP5.75□□□□□ -1.49
LDB16YCL005W PLB2Q03674 706 aa5.75□□□□□ -1.49
LDB16YCL005W TRS23Q03784 219 aa5.75□□□□□ -1.49
LDB16YCL005W YDR249CQ03787 373 aa5.75□□□□□ -1.49
LDB16YCL005W SNX41Q04053 625 aa5.75□□□□□ -1.49
LDB16YCL005W YMR252CQ04814 134 aa5.75□□□□□ -1.49
LDB16YCL005W MRPL51Q06090 140 aaPredicted RBP5.75□□□□□ -1.49
LDB16YCL005W RRP9Q06506 573 aaKnown RBP5.75□□□□□ -1.49
LDB16YCL005W RXT3Q07458 294 aa5.75□□□□□ -1.49
LDB16YCL005W IRC19Q07843 230 aa5.75□□□□□ -1.49
LDB16YCL005W AKR2Q12013 749 aa5.75□□□□□ -1.49
LDB16YCL005W BAG7Q12128 409 aa5.75□□□□□ -1.49
LDB16YCL005W YIL046W-AQ3E7Z4 54 aa5.75□□□□□ -1.49
LDB16YCL005W BLM10P43583 2143 aa5.75□□□□□ -1.49
LDB16YCL005W GCN4P03069 281 aa5.74□□□□□ -1.49
LDB16YCL005W COX9P07255 59 aa5.74□□□□□ -1.49
LDB16YCL005W PEP4P07267 405 aaKnown RBP5.74□□□□□ -1.49
LDB16YCL005W STE12P13574 688 aa5.74□□□□□ -1.49
LDB16YCL005W GCN3P14741 305 aa5.74□□□□□ -1.49
LDB16YCL005W STE50P25344 346 aa5.74□□□□□ -1.49
LDB16YCL005W BOS1P25385 244 aa5.74□□□□□ -1.49
LDB16YCL005W EHD3P28817 500 aa5.74□□□□□ -1.49
LDB16YCL005W UBS1P38290 277 aa5.74□□□□□ -1.49
LDB16YCL005W NAS2P40555 220 aa5.74□□□□□ -1.49
LDB16YCL005W PAM16P42949 149 aa5.74□□□□□ -1.49
LDB16YCL005W MSE1P48525 536 aa5.74□□□□□ -1.49
LDB16YCL005W GTF1P53260 183 aaPredicted RBP5.74□□□□□ -1.49
LDB16YCL005W SAY1P53324 424 aa5.74□□□□□ -1.49
LDB16YCL005W PEX25Q02969 394 aa5.74□□□□□ -1.49
LDB16YCL005W CGI121Q03705 181 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms